RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 MYL1P05976 194 aa13.93□□□□□ -0.18
COPB1-208ENST00000532088 SLFN14P0C7P3 912 aa13.93□□□□□ -0.18
COPB1-208ENST00000532088 COL6A1P12109 1028 aa13.93□□□□□ -0.18
COPB1-208ENST00000532088 RFC5P40937 340 aa13.93□□□□□ -0.18
COPB1-208ENST00000532088 RARRES1P49788 294 aa13.93□□□□□ -0.18
COPB1-208ENST00000532088 SNW1Q13573 536 aaKnown RBP13.93□□□□□ -0.18
COPB1-208ENST00000532088 NAALADL2Q58DX5 795 aa13.93□□□□□ -0.18
COPB1-208ENST00000532088 C1orf53Q5VUE5 145 aa13.93□□□□□ -0.18
COPB1-208ENST00000532088 KANK3Q6NY19 840 aa13.93□□□□□ -0.18
COPB1-208ENST00000532088 SYT2Q8N9I0 419 aaPredicted RBP13.93□□□□□ -0.18
COPB1-208ENST00000532088 CEP89Q96ST8 783 aa13.93□□□□□ -0.18
COPB1-208ENST00000532088 JPH2Q9BR39 696 aaPredicted RBP13.93□□□□□ -0.18
COPB1-208ENST00000532088 TIPINQ9BVW5 301 aa13.93□□□□□ -0.18
COPB1-208ENST00000532088 LRRC27Q9C0I9 530 aa13.93□□□□□ -0.18
COPB1-208ENST00000532088 STARD7Q9NQZ5 370 aa13.93□□□□□ -0.18
COPB1-208ENST00000532088 CYP26B1Q9NR63 512 aa13.93□□□□□ -0.18
COPB1-208ENST00000532088 MAGEB2O15479 319 aa13.92□□□□□ -0.18
COPB1-208ENST00000532088 DGAT1O75907 488 aa13.92□□□□□ -0.18
COPB1-208ENST00000532088 ZNF202O95125 648 aa13.92□□□□□ -0.18
COPB1-208ENST00000532088 MYCP01106 439 aaPredicted RBP13.92□□□□□ -0.18
COPB1-208ENST00000532088 RPLP2P05387 115 aaKnown RBP13.92□□□□□ -0.18
COPB1-208ENST00000532088 PLA2G4BP0C869 781 aa13.92□□□□□ -0.18
COPB1-208ENST00000532088 MARK3P27448 753 aa13.92□□□□□ -0.18
COPB1-208ENST00000532088 PSMC6P62333 389 aa13.92□□□□□ -0.18
COPB1-208ENST00000532088 ADAM17P78536 824 aa13.92□□□□□ -0.18
COPB1-208ENST00000532088 AMPD3Q01432 767 aa13.92□□□□□ -0.18
COPB1-208ENST00000532088 ITGA7Q13683 1181 aa13.92□□□□□ -0.18
COPB1-208ENST00000532088 ZRSR1Q15695 479 aaKnown RBP13.92□□□□□ -0.18
COPB1-208ENST00000532088 CNNM4Q6P4Q7 775 aa13.92□□□□□ -0.18
COPB1-208ENST00000532088 KCNK18Q7Z418 384 aa13.92□□□□□ -0.18
COPB1-208ENST00000532088 CEP57L1Q8IYX8 460 aa13.92□□□□□ -0.18
COPB1-208ENST00000532088 PDILTQ8N807 584 aa13.92□□□□□ -0.18
COPB1-208ENST00000532088 CEP170P1Q96L14 293 aa13.92□□□□□ -0.18
COPB1-208ENST00000532088 KBTBD4Q9NVX7 518 aa13.92□□□□□ -0.18
COPB1-208ENST00000532088 GTF2IRD1Q9UHL9 959 aa13.92□□□□□ -0.18
COPB1-208ENST00000532088 MBLAC1A4D2B0 266 aaPredicted RBP13.91□□□□□ -0.18
COPB1-208ENST00000532088 ARHGEF35A5YM69 484 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 ZBTB42B2RXF5 422 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 E9PMD0 336 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 HOXA2O43364 376 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 SMIM10L2AP0DMW4 78 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 SMIM10L2BP0DMW5 78 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 INSRRP14616 1297 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 SLC12A3P55017 1021 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 PPFIA1Q13136 1202 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 SNX17Q15036 470 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 GRIK4Q16099 956 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 NBPF20Q3BBV1 942 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 XKR9Q5GH70 373 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 COL13A1Q5TAT6 717 aaPredicted RBP13.91□□□□□ -0.18
COPB1-208ENST00000532088 SV2BQ7L1I2 683 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 C7orf31Q8N865 590 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 PIGOQ8TEQ8 1089 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 LRRC15Q8TF66 581 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 DHX58Q96C10 678 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 CCDC43Q96MW1 224 aaKnown RBP13.91□□□□□ -0.18
COPB1-208ENST00000532088 BHMT2Q9H2M3 363 aa13.91□□□□□ -0.18
COPB1-208ENST00000532088 DHX33Q9H6R0 707 aaKnown RBP13.91□□□□□ -0.18
COPB1-208ENST00000532088 GRIN2DO15399 1336 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 MROH7Q68CQ1 1323 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 IGKV6-21A0A0C4DH24 114 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 C17orf102A2RUQ5 167 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 ARVCFO00192 962 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 KINO60870 393 aaKnown RBP13.9□□□□□ -0.18
COPB1-208ENST00000532088 MAFO75444 373 aaPredicted RBP13.9□□□□□ -0.18
COPB1-208ENST00000532088 LIG1P18858 919 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 CYP11B2P19099 503 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 GUCY2CP25092 1073 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 CDK7P50613 346 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 LONRF3Q496Y0 759 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 KRBA2Q6ZNG9 492 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 C1orf186Q6ZWK4 172 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 NECAB2Q7Z6G3 386 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 SH3RF1Q7Z6J0 888 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 UBE2Q1Q7Z7E8 422 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 CNNM3Q8NE01 707 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 MCPH1Q8NEM0 835 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 LMBR1Q8WVP7 490 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 SLC7A3Q8WY07 619 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 ABHD8Q96I13 439 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 PLIN2Q99541 437 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 C11orf49Q9H6J7 331 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 PDLIM7Q9NR12 457 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 HDAC6Q9UBN7 1215 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 SERTAD1Q9UHV2 236 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 HOOK1Q9UJC3 728 aaKnown RBP13.9□□□□□ -0.18
COPB1-208ENST00000532088 CENPFP49454 3210 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 ARID2Q68CP9 1835 aa13.9□□□□□ -0.18
COPB1-208ENST00000532088 ZBTB39O15060 712 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 NR1I2O75469 434 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 C22orf31O95567 290 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 NPEPPSP55786 919 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 TBC1D8BQ0IIM8 1120 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 MCM6Q14566 821 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 SKIV2LQ15477 1246 aaKnown RBP13.89□□□□□ -0.19
COPB1-208ENST00000532088 MTERF2Q49AM1 385 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 PLA2G4FQ68DD2 849 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 RINT1Q6NUQ1 792 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 MTHFD1LQ6UB35 978 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 RETREG2Q8NC44 543 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms