RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 DHX15O43143 795 aaKnown RBP10.21□□□□□ -0.77
USF1-210ENST00000531842 N4BP1O75113 896 aaKnown RBP10.21□□□□□ -0.77
USF1-210ENST00000531842 DDAH1O94760 285 aa10.21□□□□□ -0.77
USF1-210ENST00000531842 SSBP05455 408 aaKnown RBP eCLIP10.21□□□□□ -0.77
USF1-210ENST00000531842 FAM86B2P0C5J1 330 aa10.21□□□□□ -0.77
USF1-210ENST00000531842 SRGAP2BP0DMP2 458 aa10.21□□□□□ -0.77
USF1-210ENST00000531842 HOXB8P17481 243 aaPredicted RBP10.21□□□□□ -0.77
USF1-210ENST00000531842 CHMLP26374 656 aa10.21□□□□□ -0.77
USF1-210ENST00000531842 CRYBB1P53674 252 aaPredicted RBP10.21□□□□□ -0.77
USF1-210ENST00000531842 BCAR1P56945 870 aa10.21□□□□□ -0.77
USF1-210ENST00000531842 NLRP11P59045 1033 aaKnown RBP10.21□□□□□ -0.77
USF1-210ENST00000531842 SMC1AQ14683 1233 aaKnown RBP10.21□□□□□ -0.77
USF1-210ENST00000531842 TPRNQ4KMQ1 711 aa10.21□□□□□ -0.77
USF1-210ENST00000531842 PDE12Q6L8Q7 609 aaKnown RBP10.21□□□□□ -0.77
USF1-210ENST00000531842 NFXL1Q6ZNB6 911 aa10.21□□□□□ -0.77
USF1-210ENST00000531842 SIX5Q8N196 739 aa10.21□□□□□ -0.77
USF1-210ENST00000531842 VPS52Q8N1B4 723 aa10.21□□□□□ -0.77
USF1-210ENST00000531842 KCNG4Q8TDN1 519 aa10.21□□□□□ -0.77
USF1-210ENST00000531842 ANO3Q9BYT9 981 aa10.21□□□□□ -0.77
USF1-210ENST00000531842 NGRNQ9NPE2 291 aaKnown RBP10.21□□□□□ -0.77
USF1-210ENST00000531842 ZNF302Q9NR11 478 aa10.21□□□□□ -0.77
USF1-210ENST00000531842 RBM8AQ9Y5S9 174 aaKnown RBP10.21□□□□□ -0.77
USF1-210ENST00000531842 U3KPZ7 1027 aaPredicted RBP10.21□□□□□ -0.77
USF1-210ENST00000531842 NFASCO94856 1347 aa10.21□□□□□ -0.78
USF1-210ENST00000531842 MIA3Q5JRA6 1907 aa10.21□□□□□ -0.78
USF1-210ENST00000531842 MYH15Q9Y2K3 1946 aa10.21□□□□□ -0.78
USF1-210ENST00000531842 ACACBO00763 2458 aa10.21□□□□□ -0.78
USF1-210ENST00000531842 CHD8Q9HCK8 2581 aa10.21□□□□□ -0.78
USF1-210ENST00000531842 KRBA1A5PL33 1030 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 TMEM150BA6NC51 233 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 HBP1O60381 514 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 ZC3H11AO75152 810 aaKnown RBP eCLIP10.2□□□□□ -0.78
USF1-210ENST00000531842 EOMESO95936 686 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 CFHP08603 1231 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 AOC1P19801 751 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 KIF5BP33176 963 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 MTHFRP42898 656 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 CLCN5P51795 746 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 KRT17Q04695 432 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 ITIH3Q06033 890 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 DRP2Q13474 957 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 SART3Q15020 963 aaKnown RBP10.2□□□□□ -0.78
USF1-210ENST00000531842 CEP55Q53EZ4 464 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 SPECC1Q5M775 1068 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 MCTP2Q6DN12 878 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 KIAA1841Q6NSI8 718 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 TMTC3Q6ZXV5 915 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 ERMP1Q7Z2K6 904 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 MICU3Q86XE3 530 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 CKAP2LQ8IYA6 745 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 CCDC105Q8IYK2 499 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 ZDHHC14Q8IZN3 488 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 LRRC43Q8N309 656 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 DTWD2Q8NBA8 298 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 SLC22A17Q8WUG5 538 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 GJA10Q969M2 543 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 TCEANC2Q96MN5 208 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 SH2D3AQ9BRG2 576 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 GBP3Q9H0R5 595 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 ZBP1Q9H171 429 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 ADAMTS10Q9H324 1103 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 DNAJB4Q9UDY4 337 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 AKT3Q9Y243 479 aa10.2□□□□□ -0.78
USF1-210ENST00000531842 MTCL1Q9Y4B5 1905 aaKnown RBP10.19□□□□□ -0.78
USF1-210ENST00000531842 CNTNAP5Q8WYK1 1306 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 CCDC69A6NI79 296 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 MEIS1O00470 390 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 LRRN2O75325 713 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 NUBP1P53384 320 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 NAPAP54920 295 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 UGCGQ16739 394 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 ZNF484Q5JVG2 852 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 TTC22Q5TAA0 569 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 JAKMIP3Q5VZ66 844 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 EFCAB12Q6NXP0 572 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 ZNF598Q86UK7 904 aaKnown RBP10.19□□□□□ -0.78
USF1-210ENST00000531842 PLA2G4DQ86XP0 818 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 ABI1Q8IZP0 508 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 ELAC1Q9H777 363 aaKnown RBP10.19□□□□□ -0.78
USF1-210ENST00000531842 KCNK12Q9HB15 430 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 GABBR1Q9UBS5 961 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 FBXL21Q9UKT6 434 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 CA14Q9ULX7 337 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 INPP5FQ9Y2H2 1132 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 ZFHX4Q86UP3 3567 aa10.19□□□□□ -0.78
USF1-210ENST00000531842 CACNA1GO43497 2377 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 COL1A2P08123 1366 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 IGLV3-22A0A075B6J6 115 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 POTEMA6NI47 508 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 STK25O00506 426 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 MAFGO15525 162 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 ZNF862O60290 1169 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 RPLP2P05387 115 aaKnown RBP10.18□□□□□ -0.78
USF1-210ENST00000531842 DCNP07585 359 aaKnown RBP10.18□□□□□ -0.78
USF1-210ENST00000531842 PPM1AP35813 382 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 ZNF76P36508 570 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 AFF1P51825 1210 aaKnown RBP10.18□□□□□ -0.78
USF1-210ENST00000531842 ATAT1Q5SQI0 421 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 FAM160B1Q5W0V3 765 aa10.18□□□□□ -0.78
USF1-210ENST00000531842 POTEGQ6S5H5 508 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms