RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 C11orf16Q9NQ32 467 aa18.94■□□□□ 0.62
CPSF1-207ENST00000531727 TYW1Q9NV66 732 aaKnown RBP18.94■□□□□ 0.62
CPSF1-207ENST00000531727 HCSTQ9UBK5 93 aa18.94■□□□□ 0.62
CPSF1-207ENST00000531727 DDX25Q9UHL0 483 aaKnown RBP18.94■□□□□ 0.62
CPSF1-207ENST00000531727 KCNJ14Q9UNX9 436 aa18.94■□□□□ 0.62
CPSF1-207ENST00000531727 MYO7AQ13402 2215 aa18.94■□□□□ 0.62
CPSF1-207ENST00000531727 STK36Q9NRP7 1315 aa18.94■□□□□ 0.62
CPSF1-207ENST00000531727 MBTPS2O43462 519 aa18.93■□□□□ 0.62
CPSF1-207ENST00000531727 STBD1O95210 358 aa18.93■□□□□ 0.62
CPSF1-207ENST00000531727 DARSP14868 501 aaKnown RBP18.93■□□□□ 0.62
CPSF1-207ENST00000531727 ZSCAN20P17040 1043 aaPredicted RBP18.93■□□□□ 0.62
CPSF1-207ENST00000531727 SMAD4Q13485 552 aaKnown RBP18.93■□□□□ 0.62
CPSF1-207ENST00000531727 SMAD2Q15796 467 aaKnown RBP18.93■□□□□ 0.62
CPSF1-207ENST00000531727 CSPP1Q1MSJ5 1256 aa18.93■□□□□ 0.62
CPSF1-207ENST00000531727 INF2Q27J81 1249 aa18.93■□□□□ 0.62
CPSF1-207ENST00000531727 MTERF2Q49AM1 385 aa18.93■□□□□ 0.62
CPSF1-207ENST00000531727 ADHFE1Q8IWW8 467 aa18.93■□□□□ 0.62
CPSF1-207ENST00000531727 EFHBQ8N7U6 833 aa18.93■□□□□ 0.62
CPSF1-207ENST00000531727 COLGALT1Q8NBJ5 622 aa18.93■□□□□ 0.62
CPSF1-207ENST00000531727 ZNF668Q96K58 619 aaPredicted RBP18.93■□□□□ 0.62
CPSF1-207ENST00000531727 SCLT1Q96NL6 688 aa18.93■□□□□ 0.62
CPSF1-207ENST00000531727 TMEM117Q9H0C3 514 aa18.93■□□□□ 0.62
CPSF1-207ENST00000531727 SLKQ9H2G2 1235 aaPredicted RBP18.93■□□□□ 0.62
CPSF1-207ENST00000531727 CD207Q9UJ71 328 aa18.93■□□□□ 0.62
CPSF1-207ENST00000531727 CCDC194A0A1B0GVG4 234 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 C19orf67A6NJJ6 358 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 HOXA2O43364 376 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 SLC37A4O43826 429 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 PFKFB2O60825 505 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 FGF18O76093 207 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 LAG3P18627 525 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 NRIP1P48552 1158 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 NDUFV1P49821 464 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 DRP2Q13474 957 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 LETM2Q2VYF4 491 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 ECHDC2Q86YB7 292 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 THNSL1Q8IYQ7 743 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 NLRP7Q8WX94 980 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 MSLNLQ96KJ4 702 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 CEP89Q96ST8 783 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 TLR9Q9NR96 1032 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 RNF19AQ9NV58 838 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 TPCN1Q9ULQ1 816 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 PCDHGC5Q9Y5F6 944 aa18.92■□□□□ 0.62
CPSF1-207ENST00000531727 IGKV6-21A0A0C4DH24 114 aa18.91■□□□□ 0.62
CPSF1-207ENST00000531727 TMEM150BA6NC51 233 aa18.91■□□□□ 0.62
CPSF1-207ENST00000531727 FAM86C2PA6NEL3 165 aa18.91■□□□□ 0.62
CPSF1-207ENST00000531727 ALADP13716 330 aa18.91■□□□□ 0.62
CPSF1-207ENST00000531727 XBP1P17861 261 aa18.91■□□□□ 0.62
CPSF1-207ENST00000531727 ANAPC15P60006 121 aa18.91■□□□□ 0.62
CPSF1-207ENST00000531727 CDC42EP1Q00587 391 aa18.91■□□□□ 0.62
CPSF1-207ENST00000531727 RBM23Q86U06 439 aaKnown RBP18.91■□□□□ 0.62
CPSF1-207ENST00000531727 CASD1Q96PB1 797 aa18.91■□□□□ 0.62
CPSF1-207ENST00000531727 DDX11L8A8MPP1 907 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 GCFC2P16383 781 aaKnown RBP18.9■□□□□ 0.62
CPSF1-207ENST00000531727 FGFR4P22455 802 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 DNM2P50570 870 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 PSMC5P62195 406 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 PPP2R5CQ13362 524 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 PPP4R3AQ6IN85 833 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 PDE12Q6L8Q7 609 aaKnown RBP18.9■□□□□ 0.62
CPSF1-207ENST00000531727 LRRC55Q6ZSA7 311 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 ANO5Q75V66 913 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 NEK8Q86SG6 692 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 ABI1Q8IZP0 508 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 MICAL1Q8TDZ2 1067 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 FAM20AQ96MK3 541 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 POP1Q99575 1024 aaKnown RBP18.9■□□□□ 0.62
CPSF1-207ENST00000531727 SH2D3AQ9BRG2 576 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 GCOM2Q9BZD3 368 aaPredicted RBP18.9■□□□□ 0.62
CPSF1-207ENST00000531727 TLE6Q9H808 572 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 KCNMB3Q9NPA1 279 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 CLEC1BQ9P126 229 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 VAV3Q9UKW4 847 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 LZTS1Q9Y250 596 aa18.9■□□□□ 0.62
CPSF1-207ENST00000531727 A0A0U1RQF3 1178 aa18.89■□□□□ 0.61
CPSF1-207ENST00000531727 EML1O00423 815 aa18.89■□□□□ 0.61
CPSF1-207ENST00000531727 MAFO75444 373 aaPredicted RBP18.89■□□□□ 0.61
CPSF1-207ENST00000531727 EYA4O95677 639 aa18.89■□□□□ 0.61
CPSF1-207ENST00000531727 GLP2RO95838 553 aa18.89■□□□□ 0.61
CPSF1-207ENST00000531727 EOMESO95936 686 aa18.89■□□□□ 0.61
CPSF1-207ENST00000531727 ERVFC1P60507 584 aa18.89■□□□□ 0.61
CPSF1-207ENST00000531727 PLCB3Q01970 1234 aa18.89■□□□□ 0.61
CPSF1-207ENST00000531727 ANKRD1Q15327 319 aa18.89■□□□□ 0.61
CPSF1-207ENST00000531727 LRRC43Q8N309 656 aa18.89■□□□□ 0.61
CPSF1-207ENST00000531727 RNF169Q8NCN4 708 aa18.89■□□□□ 0.61
CPSF1-207ENST00000531727 GJB4Q9NTQ9 266 aa18.89■□□□□ 0.61
CPSF1-207ENST00000531727 DACT1Q9NYF0 836 aa18.89■□□□□ 0.61
CPSF1-207ENST00000531727 HCN4Q9Y3Q4 1203 aa18.89■□□□□ 0.61
CPSF1-207ENST00000531727 C5orf42Q9H799 3197 aa18.88■□□□□ 0.61
CPSF1-207ENST00000531727 A0A087WZ62 844 aa18.88■□□□□ 0.61
CPSF1-207ENST00000531727 FSD2A1L4K1 749 aa18.88■□□□□ 0.61
CPSF1-207ENST00000531727 FSCN2O14926 492 aa18.88■□□□□ 0.61
CPSF1-207ENST00000531727 DCXO43602 365 aa18.88■□□□□ 0.61
CPSF1-207ENST00000531727 CCNT1O60563 726 aaKnown RBP18.88■□□□□ 0.61
CPSF1-207ENST00000531727 DTNBO60941 627 aa18.88■□□□□ 0.61
CPSF1-207ENST00000531727 CSDE1O75534 798 aaKnown RBP18.88■□□□□ 0.61
CPSF1-207ENST00000531727 CTDNEP1O95476 244 aa18.88■□□□□ 0.61
CPSF1-207ENST00000531727 QARSP47897 775 aaKnown RBP18.88■□□□□ 0.61
CPSF1-207ENST00000531727 AK2P54819 239 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms