RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 LONRF1Q17RB8 773 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 CFAP157Q5JU67 520 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 SFRP5Q5T4F7 317 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 ARMC3Q5W041 872 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 IRGCQ6NXR0 463 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 UBE3DQ7Z6J8 389 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 RAB11FIP4Q86YS3 637 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 ZDHHC13Q8IUH4 622 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 CARNMT1Q8N4J0 409 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 DCLK2Q8N568 766 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 RNF10Q8N5U6 811 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 TEX9Q8N6V9 391 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 SMC1BQ8NDV3 1235 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 KLHDC4Q8TBB5 520 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 DPF3Q92784 378 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 ZNF653Q96CK0 615 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 HVCN1Q96D96 273 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 TBC1D31Q96DN5 1066 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 PAWRQ96IZ0 340 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 TSC22D3Q99576 134 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 UQCC2Q9BRT2 126 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 FAM167BQ9BTA0 163 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 VPS33BQ9H267 617 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 CLK4Q9HAZ1 481 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 DDX21Q9NR30 783 aaKnown RBP eCLIP5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 HELLSQ9NRZ9 838 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 FKBP14Q9NWM8 211 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 DSEQ9UL01 958 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 KCNH3Q9ULD8 1083 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 TPCN1Q9ULQ1 816 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 G3BP2Q9UN86 482 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 SCAF8Q9UPN6 1271 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 SHROOM2Q13796 1616 aa5.29□□□□□ -1.56
ECHDC1-221ENST00000531582 IQANK1A0A1B0GTG1 560 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 LINC00854A0A1B0GVQ3 168 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 FAM170BA6NMN3 283 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 LRRIQ3A6PVS8 624 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 GNAT3A8MTJ3 354 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 EBAG9O00559 213 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 CYP26A1O43174 497 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 SNX2O60749 519 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 COBLO75128 1261 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 B3GALNT1O75752 331 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 SLITRK5O94991 958 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 YEATS4O95619 227 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 CAVIN2O95810 425 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 EOMESO95936 686 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 EIF2S1P05198 315 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 S100A6P06703 90 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 BTF3P20290 206 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 ENDOUP21128 410 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 HOXC13P31276 330 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 HSPA1LP34931 641 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 CTCFP49711 727 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 MCM2P49736 904 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 CLCN2P51788 898 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 CASP7P55210 303 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 MRPL28Q13084 256 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 CBX3Q13185 183 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 NMIQ13287 307 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 NAA25Q14CX7 972 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 PTPN14Q15678 1187 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 BCL2A1Q16548 175 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 BBS9Q3SYG4 887 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 VPS53Q5VIR6 699 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 NCAPH2Q6IBW4 605 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 NEPROQ6NW34 567 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 PDXDC1Q6P996 788 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 RUFY3Q7L099 469 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 ZNF765Q7L2R6 523 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 ZNF804AQ7Z570 1209 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 HOOK3Q86VS8 718 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 LSRQ86X29 649 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 LINC00469Q8N7U9 141 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 GDAP1Q8TB36 358 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 CCHCR1Q8TD31 782 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 XAGE3Q8WTP9 111 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 RNF141Q8WVD5 230 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 KAT2BQ92831 832 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 RPGRQ92834 1020 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 SHDQ96IW2 340 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 C8orf48Q96LL4 319 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 FBXL18Q96ME1 805 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 DPH2Q9BQC3 489 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 ASPNQ9BXN1 380 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 NSRP1Q9H0G5 558 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 PARVBQ9HBI1 364 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 GGA2Q9UJY4 613 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 SH3GLB1Q9Y371 365 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 SNX11Q9Y5W9 270 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 BZW2Q9Y6E2 419 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 CLIP1P30622 1438 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 NPATQ14207 1427 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 CARMIL1Q5VZK9 1371 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 AATKQ6ZMQ8 1374 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 MAP3K1Q13233 1512 aa5.28□□□□□ -1.56
ECHDC1-221ENST00000531582 SH3TC1Q8TE82 1336 aa5.27□□□□□ -1.57
ECHDC1-221ENST00000531582 A0A0B4J203 849 aa5.27□□□□□ -1.57
ECHDC1-221ENST00000531582 TMEM247A6NEH6 219 aa5.27□□□□□ -1.57
ECHDC1-221ENST00000531582 C19orf81C9J6K1 198 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms