RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 ZNF710Q8N1W2 664 aa22.52■■□□□ 1.2
HIPK3-205ENST00000531504 RNF169Q8NCN4 708 aa22.52■■□□□ 1.2
HIPK3-205ENST00000531504 FBXL21Q9UKT6 434 aa22.52■■□□□ 1.2
HIPK3-205ENST00000531504 TAF6LQ9Y6J9 622 aa22.52■■□□□ 1.2
HIPK3-205ENST00000531504 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.51■■□□□ 1.19
HIPK3-205ENST00000531504 ZBTB42B2RXF5 422 aa22.51■■□□□ 1.19
HIPK3-205ENST00000531504 DDX39AO00148 427 aaKnown RBP22.51■■□□□ 1.19
HIPK3-205ENST00000531504 CXCL14O95715 111 aa22.51■■□□□ 1.19
HIPK3-205ENST00000531504 CCNE2O96020 404 aa22.51■■□□□ 1.19
HIPK3-205ENST00000531504 FOSP01100 380 aaPredicted RBP22.51■■□□□ 1.19
HIPK3-205ENST00000531504 PTH1RQ03431 593 aa22.51■■□□□ 1.19
HIPK3-205ENST00000531504 TDGQ13569 410 aa22.51■■□□□ 1.19
HIPK3-205ENST00000531504 OTOP3Q7RTS5 596 aa22.51■■□□□ 1.19
HIPK3-205ENST00000531504 CKAP2LQ8IYA6 745 aa22.51■■□□□ 1.19
HIPK3-205ENST00000531504 C12orf76Q8N812 135 aaPredicted RBP22.51■■□□□ 1.19
HIPK3-205ENST00000531504 DTWD2Q8NBA8 298 aa22.51■■□□□ 1.19
HIPK3-205ENST00000531504 KCNG4Q8TDN1 519 aa22.51■■□□□ 1.19
HIPK3-205ENST00000531504 BBXQ8WY36 941 aaPredicted RBP22.51■■□□□ 1.19
HIPK3-205ENST00000531504 CEP131Q9UPN4 1083 aa22.51■■□□□ 1.19
HIPK3-205ENST00000531504 METAP2P50579 478 aaKnown RBP eCLIP22.5■■□□□ 1.19
HIPK3-205ENST00000531504 CLLU1OSQ5K130 101 aa22.5■■□□□ 1.19
HIPK3-205ENST00000531504 CCDC149Q6ZUS6 474 aa22.5■■□□□ 1.19
HIPK3-205ENST00000531504 RSPH1Q8WYR4 309 aa22.5■■□□□ 1.19
HIPK3-205ENST00000531504 MAP7D2Q96T17 732 aa22.5■■□□□ 1.19
HIPK3-205ENST00000531504 DUSP12Q9UNI6 340 aa22.5■■□□□ 1.19
HIPK3-205ENST00000531504 EP300Q09472 2414 aaPredicted RBP22.49■■□□□ 1.19
HIPK3-205ENST00000531504 hCG_1642624A0A1W2PR95 340 aa22.49■■□□□ 1.19
HIPK3-205ENST00000531504 SPDYE4A6NLX3 237 aa22.49■■□□□ 1.19
HIPK3-205ENST00000531504 MEIS1O00470 390 aa22.49■■□□□ 1.19
HIPK3-205ENST00000531504 LMNAP02545 664 aaKnown RBP22.49■■□□□ 1.19
HIPK3-205ENST00000531504 ZNF76P36508 570 aa22.49■■□□□ 1.19
HIPK3-205ENST00000531504 NIPA1Q7RTP0 329 aa22.49■■□□□ 1.19
HIPK3-205ENST00000531504 DGLUCYQ7Z3D6 616 aa22.49■■□□□ 1.19
HIPK3-205ENST00000531504 CABP7Q86V35 215 aa22.49■■□□□ 1.19
HIPK3-205ENST00000531504 PPFIBP1Q86W92 1011 aa22.49■■□□□ 1.19
HIPK3-205ENST00000531504 VPS52Q8N1B4 723 aa22.49■■□□□ 1.19
HIPK3-205ENST00000531504 ZBP1Q9H171 429 aa22.49■■□□□ 1.19
HIPK3-205ENST00000531504 AKT3Q9Y243 479 aa22.49■■□□□ 1.19
HIPK3-205ENST00000531504 IRAK3Q9Y616 596 aa22.49■■□□□ 1.19
HIPK3-205ENST00000531504 MAGEB2O15479 319 aa22.48■■□□□ 1.19
HIPK3-205ENST00000531504 PI15O43692 258 aa22.48■■□□□ 1.19
HIPK3-205ENST00000531504 EPCAMP16422 314 aa22.48■■□□□ 1.19
HIPK3-205ENST00000531504 NPR3P17342 541 aa22.48■■□□□ 1.19
HIPK3-205ENST00000531504 RXRAP19793 462 aa22.48■■□□□ 1.19
HIPK3-205ENST00000531504 EIF4BP23588 611 aaKnown RBP22.48■■□□□ 1.19
HIPK3-205ENST00000531504 TMOD1P28289 359 aa22.48■■□□□ 1.19
HIPK3-205ENST00000531504 POLGP54098 1239 aaPredicted RBP22.48■■□□□ 1.19
HIPK3-205ENST00000531504 BCAR1P56945 870 aa22.48■■□□□ 1.19
HIPK3-205ENST00000531504 NLRP11P59045 1033 aaKnown RBP22.48■■□□□ 1.19
HIPK3-205ENST00000531504 SWSAP1Q6NVH7 229 aa22.48■■□□□ 1.19
HIPK3-205ENST00000531504 SIX5Q8N196 739 aa22.48■■□□□ 1.19
HIPK3-205ENST00000531504 HELQQ8TDG4 1101 aa22.48■■□□□ 1.19
HIPK3-205ENST00000531504 TMEM87BQ96K49 555 aa22.48■■□□□ 1.19
HIPK3-205ENST00000531504 ANO3Q9BYT9 981 aa22.48■■□□□ 1.19
HIPK3-205ENST00000531504 SFXN1Q9H9B4 322 aa22.48■■□□□ 1.19
HIPK3-205ENST00000531504 WDR87Q6ZQQ6 2873 aa22.48■■□□□ 1.19
HIPK3-205ENST00000531504 A0A0U1RQF3 1178 aa22.47■■□□□ 1.19
HIPK3-205ENST00000531504 PRC1O43663 620 aa22.47■■□□□ 1.19
HIPK3-205ENST00000531504 PPP1R18Q6NYC8 613 aa22.47■■□□□ 1.19
HIPK3-205ENST00000531504 TMC5Q6UXY8 1006 aa22.47■■□□□ 1.19
HIPK3-205ENST00000531504 CCDC82Q8N4S0 544 aa22.47■■□□□ 1.19
HIPK3-205ENST00000531504 RMDN1Q96DB5 314 aa22.47■■□□□ 1.19
HIPK3-205ENST00000531504 PGBD1Q96JS3 809 aa22.47■■□□□ 1.19
HIPK3-205ENST00000531504 RIC8AQ9NPQ8 531 aa22.47■■□□□ 1.19
HIPK3-205ENST00000531504 DACT1Q9NYF0 836 aa22.47■■□□□ 1.19
HIPK3-205ENST00000531504 TCEAL9Q9UHQ7 104 aa22.47■■□□□ 1.19
HIPK3-205ENST00000531504 NT5C1B-RDH14C9J2C7 533 aa22.46■■□□□ 1.19
HIPK3-205ENST00000531504 CTSAP10619 480 aa22.46■■□□□ 1.19
HIPK3-205ENST00000531504 RFX1P22670 979 aa22.46■■□□□ 1.19
HIPK3-205ENST00000531504 MCM5P33992 734 aa22.46■■□□□ 1.19
HIPK3-205ENST00000531504 SREBF1P36956 1147 aa22.46■■□□□ 1.19
HIPK3-205ENST00000531504 CLCN3P51790 818 aa22.46■■□□□ 1.19
HIPK3-205ENST00000531504 ADCY7P51828 1080 aa22.46■■□□□ 1.19
HIPK3-205ENST00000531504 NAPAP54920 295 aa22.46■■□□□ 1.19
HIPK3-205ENST00000531504 AP3B2Q13367 1082 aa22.46■■□□□ 1.19
HIPK3-205ENST00000531504 KANK3Q6NY19 840 aa22.46■■□□□ 1.19
HIPK3-205ENST00000531504 TMTC3Q6ZXV5 915 aa22.46■■□□□ 1.19
HIPK3-205ENST00000531504 GPR149Q86SP6 731 aa22.46■■□□□ 1.19
HIPK3-205ENST00000531504 SLC22A17Q8WUG5 538 aa22.46■■□□□ 1.19
HIPK3-205ENST00000531504 IGSF9Q9P2J2 1179 aa22.46■■□□□ 1.19
HIPK3-205ENST00000531504 SLC12A7Q9Y666 1083 aa22.46■■□□□ 1.19
HIPK3-205ENST00000531504 MED19A0JLT2 244 aaPredicted RBP22.45■■□□□ 1.18
HIPK3-205ENST00000531504 SH2B2O14492 632 aaPredicted RBP22.45■■□□□ 1.18
HIPK3-205ENST00000531504 ZC3H11AO75152 810 aaKnown RBP eCLIP22.45■■□□□ 1.18
HIPK3-205ENST00000531504 ATP4AP20648 1035 aa22.45■■□□□ 1.18
HIPK3-205ENST00000531504 WWC2Q6AWC2 1192 aa22.45■■□□□ 1.18
HIPK3-205ENST00000531504 DDX53Q86TM3 631 aaKnown RBP22.45■■□□□ 1.18
HIPK3-205ENST00000531504 ZNF598Q86UK7 904 aaKnown RBP22.45■■□□□ 1.18
HIPK3-205ENST00000531504 AUTS2Q8WXX7 1259 aa22.45■■□□□ 1.18
HIPK3-205ENST00000531504 FAM167AQ96KS9 214 aa22.45■■□□□ 1.18
HIPK3-205ENST00000531504 SCLT1Q96NL6 688 aa22.45■■□□□ 1.18
HIPK3-205ENST00000531504 GLT8D2Q9H1C3 349 aa22.45■■□□□ 1.18
HIPK3-205ENST00000531504 KCNK12Q9HB15 430 aa22.45■■□□□ 1.18
HIPK3-205ENST00000531504 MAFBQ9Y5Q3 323 aaPredicted RBP22.45■■□□□ 1.18
HIPK3-205ENST00000531504 DMXL1Q9Y485 3027 aa22.44■■□□□ 1.18
HIPK3-205ENST00000531504 IPO5O00410 1097 aaKnown RBP22.44■■□□□ 1.18
HIPK3-205ENST00000531504 STK25O00506 426 aa22.44■■□□□ 1.18
HIPK3-205ENST00000531504 LIFRP42702 1097 aa22.44■■□□□ 1.18
HIPK3-205ENST00000531504 PUM1Q14671 1186 aaKnown RBP eCLIP22.44■■□□□ 1.18
HIPK3-205ENST00000531504 EFCAB12Q6NXP0 572 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms