RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CAMKK2Q96RR4 588 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 KCNH7Q9NS40 1196 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 SMARCAL1Q9NZC9 954 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 TMEM59LQ9UK28 342 aa18.76■□□□□ 0.59
BRCA2-204ENST00000530893 HIP1RO75146 1068 aa18.75■□□□□ 0.59
BRCA2-204ENST00000530893 PHACTR2O75167 634 aa18.75■□□□□ 0.59
BRCA2-204ENST00000530893 RPS6KA5O75582 802 aa18.75■□□□□ 0.59
BRCA2-204ENST00000530893 LYPLA2O95372 231 aa18.75■□□□□ 0.59
BRCA2-204ENST00000530893 NOP2P46087 812 aaKnown RBP18.75■□□□□ 0.59
BRCA2-204ENST00000530893 SLC7A5Q01650 507 aa18.75■□□□□ 0.59
BRCA2-204ENST00000530893 MAPK7Q13164 816 aa18.75■□□□□ 0.59
BRCA2-204ENST00000530893 LEKR1Q6ZMV7 388 aa18.75■□□□□ 0.59
BRCA2-204ENST00000530893 SLFN11Q7Z7L1 901 aa18.75■□□□□ 0.59
BRCA2-204ENST00000530893 EIF1ADQ8N9N8 165 aaKnown RBP18.75■□□□□ 0.59
BRCA2-204ENST00000530893 ACTRT1Q8TDG2 376 aa18.75■□□□□ 0.59
BRCA2-204ENST00000530893 TIPINQ9BVW5 301 aa18.75■□□□□ 0.59
BRCA2-204ENST00000530893 AJAP1Q9UKB5 411 aaPredicted RBP18.75■□□□□ 0.59
BRCA2-204ENST00000530893 AGPSO00116 658 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 EVI5O60447 810 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 CAPN2P17655 700 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 HNRNPH2P55795 449 aaKnown RBP18.74■□□□□ 0.59
BRCA2-204ENST00000530893 BFSP1Q12934 665 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 ZSCAN26Q16670 478 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 PADI6Q6TGC4 694 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 CDAN1Q8IWY9 1227 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 C12orf56Q8IXR9 622 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 SYCP3Q8IZU3 236 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 BANK1Q8NDB2 785 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 TPCN2Q8NHX9 752 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 SLC30A5Q8TAD4 765 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 CLEC4DQ8WXI8 215 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 CALR3Q96L12 384 aaKnown RBP18.74■□□□□ 0.59
BRCA2-204ENST00000530893 AGBL1Q96MI9 1066 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 GLIS2Q9BZE0 524 aaPredicted RBP18.74■□□□□ 0.59
BRCA2-204ENST00000530893 CWC15Q9P013 229 aaKnown RBP18.74■□□□□ 0.59
BRCA2-204ENST00000530893 APEX2Q9UBZ4 518 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 RGS17Q9UGC6 210 aaPredicted RBP18.74■□□□□ 0.59
BRCA2-204ENST00000530893 UBIAD1Q9Y5Z9 338 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 DDX3XO00571 662 aaKnown RBP eCLIP18.74■□□□□ 0.597e-10■■■■■ 46.5
BRCA2-204ENST00000530893 INPP5BP32019 993 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 SNRPFP62306 86 aaKnown RBP18.74■□□□□ 0.59
BRCA2-204ENST00000530893 PAK2Q13177 524 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 COG2Q14746 738 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 DAW1Q8N136 415 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 GDAP1L1Q96MZ0 367 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 ZNF341Q9BYN7 854 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 TBC1D22BQ9NU19 505 aa18.74■□□□□ 0.59
BRCA2-204ENST00000530893 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.74■□□□□ 0.59
BRCA2-204ENST00000530893 WNT10BO00744 389 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 KCNK3O14649 394 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 P4HA2O15460 535 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 DHX15O43143 795 aaKnown RBP18.73■□□□□ 0.59
BRCA2-204ENST00000530893 OPA1O60313 960 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 EXOC3O60645 756 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 CYP2J2P51589 502 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 SF3B2Q13435 895 aaKnown RBP18.73■□□□□ 0.59
BRCA2-204ENST00000530893 INTS8Q75QN2 995 aaKnown RBP18.73■□□□□ 0.59
BRCA2-204ENST00000530893 HOOK2Q96ED9 719 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 KIAA1683Q9H0B3 1180 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 SUCLA2Q9P2R7 463 aaPredicted RBP18.73■□□□□ 0.59
BRCA2-204ENST00000530893 DNAJC12Q9UKB3 198 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 PHF20L1A8MW92 1017 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 HEXIM1O94992 359 aaKnown RBP18.73■□□□□ 0.59
BRCA2-204ENST00000530893 IVLP07476 585 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 KRT13P13646 458 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 QARSP47897 775 aaKnown RBP18.73■□□□□ 0.59
BRCA2-204ENST00000530893 MYL7Q01449 175 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 CETN1Q12798 172 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 DRAP1Q14919 205 aaPredicted RBP18.73■□□□□ 0.59
BRCA2-204ENST00000530893 TKFCQ3LXA3 575 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 GJB7Q6PEY0 223 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 SLC17A8Q8NDX2 589 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 INTS2Q9H0H0 1204 aaKnown RBP18.73■□□□□ 0.59
BRCA2-204ENST00000530893 ST6GALNAC4Q9H4F1 302 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 AGO4Q9HCK5 861 aaKnown RBP18.73■□□□□ 0.59
BRCA2-204ENST00000530893 COL20A1Q9P218 1284 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 PACSIN2Q9UNF0 486 aaPredicted RBP18.73■□□□□ 0.59
BRCA2-204ENST00000530893 ZHX2Q9Y6X8 837 aa18.73■□□□□ 0.59
BRCA2-204ENST00000530893 GOLGA8KD6RF30 607 aa18.72■□□□□ 0.59
BRCA2-204ENST00000530893 K7ENM7 598 aa18.72■□□□□ 0.59
BRCA2-204ENST00000530893 MAPK13O15264 365 aa18.72■□□□□ 0.59
BRCA2-204ENST00000530893 KCNA3P22001 575 aa18.72■□□□□ 0.59
BRCA2-204ENST00000530893 TNFAIP1Q13829 316 aa18.72■□□□□ 0.59
BRCA2-204ENST00000530893 CBWD6Q4V339 395 aa18.72■□□□□ 0.59
BRCA2-204ENST00000530893 CBWD3Q5JTY5 395 aa18.72■□□□□ 0.59
BRCA2-204ENST00000530893 CBWD5Q5RIA9 395 aa18.72■□□□□ 0.59
BRCA2-204ENST00000530893 SAMD1Q6SPF0 538 aaPredicted RBP18.72■□□□□ 0.59
BRCA2-204ENST00000530893 IWS1Q96ST2 819 aa18.72■□□□□ 0.59
BRCA2-204ENST00000530893 SH3GL2Q99962 352 aa18.72■□□□□ 0.59
BRCA2-204ENST00000530893 SYT11Q9BT88 431 aa18.72■□□□□ 0.59
BRCA2-204ENST00000530893 IKZF4Q9H2S9 585 aa18.72■□□□□ 0.59
BRCA2-204ENST00000530893 SLC38A10Q9HBR0 1119 aa18.72■□□□□ 0.59
BRCA2-204ENST00000530893 NFIBO00712 420 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 GLI1P08151 1106 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 TMEM253P0C7T8 217 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 PLS3P13797 630 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 RARRES1P49788 294 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 PPFIA1Q13136 1202 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 MTMR1Q13613 665 aa18.71■□□□□ 0.59
BRCA2-204ENST00000530893 PEX26Q7Z412 305 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms