RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 NSUN6Q8TEA1 469 aaKnown RBP9.08□□□□□ -0.96
CTNND1-227ENST00000530748 ZC3H15Q8WU90 426 aaKnown RBP9.08□□□□□ -0.96
CTNND1-227ENST00000530748 DDX56Q9NY93 547 aaKnown RBP9.08□□□□□ -0.96
CTNND1-227ENST00000530748 DONSONQ9NYP3 566 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-227ENST00000530748 MAP3K7O43318 606 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 CTNND1O60716 968 aaKnown RBP9.07□□□□□ -0.96
CTNND1-227ENST00000530748 SMIM24O75264 130 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 IGKV5-2P06315 115 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 TTLL4Q14679 1199 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 BBS9Q3SYG4 887 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 FRA10AC1Q70Z53 315 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 SCYL3Q8IZE3 742 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 ENAHQ8N8S7 591 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-227ENST00000530748 IFT43Q96FT9 208 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 FAM49AQ9H0Q0 323 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-227ENST00000530748 TSPYL2Q9H2G4 693 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-227ENST00000530748 SAYSD1Q9NPB0 183 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 TOPORSQ9NS56 1045 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-227ENST00000530748 IRAK4Q9NWZ3 460 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 LMCD1Q9NZU5 365 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 PACSIN2Q9UNF0 486 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-227ENST00000530748 TRIM49BA6NDI0 452 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 LRRC53A6NM62 1247 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 CYP27B1O15528 508 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 NMT2O60551 498 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 SETSIPP0DME0 302 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 PAPOLAP51003 745 aaKnown RBP9.07□□□□□ -0.96
CTNND1-227ENST00000530748 VAMP7P51809 220 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 PHEXP78562 749 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 MAPK6Q16659 721 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 EPHA10Q5JZY3 1008 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 TMTC4Q5T4D3 741 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 XXYLT1Q8NBI6 393 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 CYP26B1Q9NR63 512 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 CNOT8Q9UFF9 292 aaKnown RBP9.07□□□□□ -0.96
CTNND1-227ENST00000530748 IP6K2Q9UHH9 426 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 PPME1Q9Y570 386 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 E9PMD0 336 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 SLC16A4O15374 487 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 P4HBP07237 508 aaKnown RBP9.07□□□□□ -0.96
CTNND1-227ENST00000530748 KNOP1Q1ED39 458 aaKnown RBP9.07□□□□□ -0.96
CTNND1-227ENST00000530748 OXER1Q8TDS5 423 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 ADAM22Q9P0K1 906 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 ANAPC7Q9UJX3 599 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 DENND3A2RUS2 1198 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 MAPK13O15264 365 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 PODNQ7Z5L7 613 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 FBXL13Q8NEE6 735 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 MORC4Q8TE76 937 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 MAML1Q92585 1016 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 CEP95Q96GE4 821 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 WRNIP1Q96S55 665 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 FAM213AQ9BRX8 229 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 NUP85Q9BW27 656 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 ABCB6Q9NP58 842 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 DCP1AQ9NPI6 582 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-227ENST00000530748 CLTCQ00610 1675 aaKnown RBP9.07□□□□□ -0.96
CTNND1-227ENST00000530748 SPECC1L-ADORA2AF8WAN1 911 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 HUS1O60921 280 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 PRCPP42785 496 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 CACNB3P54284 484 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 FOXO4P98177 505 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 GFPT1Q06210 699 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-227ENST00000530748 DRP2Q13474 957 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 KLHL38Q2WGJ6 581 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 THNSL1Q8IYQ7 743 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 PDIK1LQ8N165 341 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 MICAL1Q8TDZ2 1067 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 SEL1LQ9UBV2 794 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 RRP15Q9Y3B9 282 aaKnown RBP9.07□□□□□ -0.96
CTNND1-227ENST00000530748 ZHX2Q9Y6X8 837 aa9.07□□□□□ -0.96
CTNND1-227ENST00000530748 M0QYV0 167 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 CTIFO43310 598 aaKnown RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 HSPA4LO95757 839 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 AP3M2P53677 418 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 SEMA3FQ13275 785 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 KRT33BQ14525 404 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 EMBQ6PCB8 327 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 CRLF3Q8IUI8 442 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 LRRC43Q8N309 656 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 DACT3Q96B18 629 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 CCDC124Q96CT7 223 aaKnown RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 TRIM4Q9C037 500 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 OLA1Q9NTK5 396 aaKnown RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 FGFR1OP2Q9NVK5 253 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 PXDNLA1KZ92 1463 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 REREQ9P2R6 1566 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 ZNF189O75820 626 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 DCTN3O75935 186 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 PRDX5P30044 214 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 CLCN6P51797 869 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 GPD1LQ8N335 351 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 PDCD7Q8N8D1 485 aaKnown RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 TMEM35BQ8NCS4 154 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 GIPC2Q8TF65 315 aa9.06□□□□□ -0.96
CTNND1-227ENST00000530748 PPWD1Q96BP3 646 aaKnown RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 MRPL4Q9BYD3 311 aaKnown RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 TDRD3Q9H7E2 651 aaKnown RBP9.06□□□□□ -0.96
CTNND1-227ENST00000530748 NFU1Q9UMS0 254 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms