RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 CDR2LQ86X02 465 aaPredicted RBP13.35□□□□□ -0.27
SCN3B-206ENST00000530277 VSIG1Q86XK7 387 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 SCFD1Q8WVM8 642 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 RNF25Q96BH1 459 aaPredicted RBP13.35□□□□□ -0.27
SCN3B-206ENST00000530277 APOL6Q9BWW8 343 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 OSGEPQ9NPF4 335 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 INTS9Q9NV88 658 aaKnown RBP13.35□□□□□ -0.27
SCN3B-206ENST00000530277 ZHX2Q9Y6X8 837 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 TISP43B9A030 160 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 PSMD14O00487 310 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 AKAP3O75969 853 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 GAP43P17677 238 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 AP3B2Q13367 1082 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 RC3H1Q5TC82 1133 aaKnown RBP13.35□□□□□ -0.27
SCN3B-206ENST00000530277 SWSAP1Q6NVH7 229 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 RSRC2Q7L4I2 434 aaKnown RBP13.35□□□□□ -0.27
SCN3B-206ENST00000530277 SUPT20HQ8NEM7 779 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 DCAF4Q8WV16 495 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 CEP63Q96MT8 703 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 TTLL3Q9Y4R7 772 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 FAM169AQ9Y6X4 670 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 RGPD2P0DJD1 1756 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 KDM4FA0A1W2PPD8 638 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 DESP17661 470 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 DDR1Q08345 913 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 EMBQ6PCB8 327 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 WDR59Q6PJI9 974 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 TRAPPC11Q7Z392 1133 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 INTS2Q9H0H0 1204 aaKnown RBP13.35□□□□□ -0.27
SCN3B-206ENST00000530277 ACP6Q9NPH0 428 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 GABBR1Q9UBS5 961 aa13.35□□□□□ -0.27
SCN3B-206ENST00000530277 MYBL2P10244 700 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 NBPF9Q3BBW0 867 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 CENPPQ6IPU0 288 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 RNF207Q6ZRF8 634 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 TTLL6Q8N841 843 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 ZIM3Q96PE6 472 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 DNAJC7Q99615 494 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 PPFIA4O75335 1185 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 ARP10275 920 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 FGFR4P22455 802 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 ACOT2P49753 483 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 GKAP1Q5VSY0 366 aaPredicted RBP13.34□□□□□ -0.27
SCN3B-206ENST00000530277 CERS5Q8N5B7 392 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 FAM20AQ96MK3 541 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 NLRP4Q96MN2 994 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 ERGIC2Q96RQ1 377 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 MAK16Q9BXY0 300 aaKnown RBP13.34□□□□□ -0.27
SCN3B-206ENST00000530277 CNOT8Q9UFF9 292 aaKnown RBP13.34□□□□□ -0.27
SCN3B-206ENST00000530277 CNTNAP4Q9C0A0 1308 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.34□□□□□ -0.27
SCN3B-206ENST00000530277 EIF4E1BA6NMX2 242 aaKnown RBP13.34□□□□□ -0.27
SCN3B-206ENST00000530277 KLRC4O43908 158 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 RPSAP08865 295 aaKnown RBP13.34□□□□□ -0.27
SCN3B-206ENST00000530277 SHMT1P34896 483 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 Q3C1V9 767 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 C10orf76Q5T2E6 689 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 HAUS6Q7Z4H7 955 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 SESTD1Q86VW0 696 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 XXYLT1Q8NBI6 393 aa13.34□□□□□ -0.27
SCN3B-206ENST00000530277 POP1Q99575 1024 aaKnown RBP13.34□□□□□ -0.27
SCN3B-206ENST00000530277 PI4K2BG5E9Z4 385 aa13.33□□□□□ -0.27
SCN3B-206ENST00000530277 PIK3R2O00459 728 aa13.33□□□□□ -0.27
SCN3B-206ENST00000530277 USP11P51784 963 aa13.33□□□□□ -0.27
SCN3B-206ENST00000530277 MFAP3P55082 362 aa13.33□□□□□ -0.27
SCN3B-206ENST00000530277 MTMR3Q13615 1198 aa13.33□□□□□ -0.27
SCN3B-206ENST00000530277 CASC4Q6P4E1 433 aa13.33□□□□□ -0.27
SCN3B-206ENST00000530277 SLC35G2Q8TBE7 412 aa13.33□□□□□ -0.27
SCN3B-206ENST00000530277 BCAS3Q9H6U6 928 aa13.33□□□□□ -0.27
SCN3B-206ENST00000530277 FAM86B1E9PN63 330 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 F5H423 210 aaPredicted RBP13.33□□□□□ -0.28
SCN3B-206ENST00000530277 CALCAP01258 141 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 GLI1P08151 1106 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 ASNSP08243 561 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 FAM86B2P0C5J1 330 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 ERFP50548 548 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 VAMP7P51809 220 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 SNRNP48Q6IEG0 339 aaKnown RBP13.33□□□□□ -0.28
SCN3B-206ENST00000530277 FAM47EQ6ZV65 393 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 INTS8Q75QN2 995 aaKnown RBP13.33□□□□□ -0.28
SCN3B-206ENST00000530277 COL23A1Q86Y22 540 aaPredicted RBP13.33□□□□□ -0.28
SCN3B-206ENST00000530277 CCDC13Q8IYE1 715 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 RNPC3Q96LT9 517 aaKnown RBP13.33□□□□□ -0.28
SCN3B-206ENST00000530277 REXO2Q9Y3B8 237 aaKnown RBP13.33□□□□□ -0.28
SCN3B-206ENST00000530277 NKRFO15226 690 aaKnown RBP eCLIP13.33□□□□□ -0.28
SCN3B-206ENST00000530277 ZNF131P52739 623 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 RASA3Q14644 834 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 NAA25Q14CX7 972 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 ECM1Q16610 540 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 TMEM270Q6UE05 265 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 CCDC91Q7Z6B0 441 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 SLC7A3Q8WY07 619 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 WRNIP1Q96S55 665 aa13.33□□□□□ -0.28
SCN3B-206ENST00000530277 ELAC2Q9BQ52 826 aaKnown RBP13.33□□□□□ -0.28
SCN3B-206ENST00000530277 ITGA4P13612 1032 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 RHBDL3P58872 404 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 EAPPQ56P03 285 aaPredicted RBP13.32□□□□□ -0.28
SCN3B-206ENST00000530277 BRDTQ58F21 947 aaPredicted RBP13.32□□□□□ -0.28
SCN3B-206ENST00000530277 BARGINQ6ZT62 677 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 MCF2L2Q86YR7 1114 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms