RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 DDX60LQ5H9U9 1706 aaKnown RBP8.66□□□□□ -1.02
SVIP-204ENST00000530199 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.65□□□□□ -1.02
SVIP-204ENST00000530199 DNAJC8O75937 253 aaPredicted RBP8.65□□□□□ -1.02
SVIP-204ENST00000530199 COL6A1P12109 1028 aa8.65□□□□□ -1.02
SVIP-204ENST00000530199 MYL6BP14649 208 aa8.65□□□□□ -1.02
SVIP-204ENST00000530199 POU3F3P20264 500 aaPredicted RBP8.65□□□□□ -1.02
SVIP-204ENST00000530199 SOX5P35711 763 aa8.65□□□□□ -1.02
SVIP-204ENST00000530199 FLT3LGP49771 235 aa8.65□□□□□ -1.02
SVIP-204ENST00000530199 SCRN1Q12765 414 aa8.65□□□□□ -1.02
SVIP-204ENST00000530199 VGLL4Q14135 290 aa8.65□□□□□ -1.02
SVIP-204ENST00000530199 CLEC16AQ2KHT3 1053 aa8.65□□□□□ -1.02
SVIP-204ENST00000530199 CRTC3Q6UUV7 619 aa8.65□□□□□ -1.02
SVIP-204ENST00000530199 FBXL6Q8N531 539 aa8.65□□□□□ -1.02
SVIP-204ENST00000530199 ZNF655Q8N720 491 aaPredicted RBP8.65□□□□□ -1.02
SVIP-204ENST00000530199 KREMEN2Q8NCW0 462 aa8.65□□□□□ -1.02
SVIP-204ENST00000530199 TP53INP1Q96A56 240 aa8.65□□□□□ -1.02
SVIP-204ENST00000530199 MFSD14AQ96MC6 490 aa8.65□□□□□ -1.02
SVIP-204ENST00000530199 LBHD1Q9BQE6 289 aaPredicted RBP8.65□□□□□ -1.02
SVIP-204ENST00000530199 DUSP15Q9H1R2 295 aaPredicted RBP8.65□□□□□ -1.02
SVIP-204ENST00000530199 EPHX3Q9H6B9 360 aa8.65□□□□□ -1.02
SVIP-204ENST00000530199 DDX56Q9NY93 547 aaKnown RBP8.65□□□□□ -1.02
SVIP-204ENST00000530199 OGDHLQ9ULD0 1010 aa8.65□□□□□ -1.02
SVIP-204ENST00000530199 ECM29Q5VYK3 1845 aa8.64□□□□□ -1.03
SVIP-204ENST00000530199 CD3EP07766 207 aa8.64□□□□□ -1.03
SVIP-204ENST00000530199 SNAPC2Q13487 334 aa8.64□□□□□ -1.03
SVIP-204ENST00000530199 AKNAD1Q5T1N1 836 aa8.64□□□□□ -1.03
SVIP-204ENST00000530199 DENND5AQ6IQ26 1287 aa8.64□□□□□ -1.03
SVIP-204ENST00000530199 CNNM4Q6P4Q7 775 aa8.64□□□□□ -1.03
SVIP-204ENST00000530199 PRR23CQ6ZRP0 262 aa8.64□□□□□ -1.03
SVIP-204ENST00000530199 MAMDC2Q7Z304 686 aaPredicted RBP8.64□□□□□ -1.03
SVIP-204ENST00000530199 ANKRD23Q86SG2 305 aa8.64□□□□□ -1.03
SVIP-204ENST00000530199 JAMLQ86YT9 394 aa8.64□□□□□ -1.03
SVIP-204ENST00000530199 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.64□□□□□ -1.03
SVIP-204ENST00000530199 STAG1Q8WVM7 1258 aa8.64□□□□□ -1.03
SVIP-204ENST00000530199 COPS5Q92905 334 aa8.64□□□□□ -1.03
SVIP-204ENST00000530199 FAM126AQ9BYI3 521 aaPredicted RBP8.64□□□□□ -1.03
SVIP-204ENST00000530199 ATP8A1Q9Y2Q0 1164 aa8.64□□□□□ -1.03
SVIP-204ENST00000530199 MGAMO43451 1857 aa8.64□□□□□ -1.03
SVIP-204ENST00000530199 MED23Q9ULK4 1368 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 DNAH12Q6ZR08 3092 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 XDHP47989 1333 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 RNF225M0QZC1 329 aaPredicted RBP8.63□□□□□ -1.03
SVIP-204ENST00000530199 STXBP3O00186 592 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 AURKAO14965 403 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 GATA4P43694 442 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 DLGAP5Q15398 846 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 SHHQ15465 462 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 CT47A1Q5JQC4 288 aaPredicted RBP8.63□□□□□ -1.03
SVIP-204ENST00000530199 DUSP27Q5VZP5 1158 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 RNF43Q68DV7 783 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 USP53Q70EK8 1073 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 FGD2Q7Z6J4 655 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 ERO1BQ86YB8 467 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 UBR7Q8N806 425 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 DDX1Q92499 740 aaKnown RBP8.63□□□□□ -1.03
SVIP-204ENST00000530199 TCTN2Q96GX1 697 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 SCLYQ96I15 445 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 GPATCH2Q9NW75 528 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 RNF112Q9ULX5 631 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 ST14Q9Y5Y6 855 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 BACE2Q9Y5Z0 518 aa8.63□□□□□ -1.03
SVIP-204ENST00000530199 FAM181BA6NEQ2 426 aa8.62□□□□□ -1.03
SVIP-204ENST00000530199 MYO1BO43795 1136 aa8.62□□□□□ -1.03
SVIP-204ENST00000530199 F13BP05160 661 aa8.62□□□□□ -1.03
SVIP-204ENST00000530199 NOP2P46087 812 aaKnown RBP8.62□□□□□ -1.03
SVIP-204ENST00000530199 OXCT1P55809 520 aa8.62□□□□□ -1.03
SVIP-204ENST00000530199 NHLH1Q02575 133 aa8.62□□□□□ -1.03
SVIP-204ENST00000530199 PPIL2Q13356 520 aa8.62□□□□□ -1.03
SVIP-204ENST00000530199 LRRC26Q2I0M4 334 aa8.62□□□□□ -1.03
SVIP-204ENST00000530199 FRS2Q8WU20 508 aa8.62□□□□□ -1.03
SVIP-204ENST00000530199 DCAF4Q8WV16 495 aa8.62□□□□□ -1.03
SVIP-204ENST00000530199 FCRL3Q96P31 734 aaPredicted RBP8.62□□□□□ -1.03
SVIP-204ENST00000530199 COA1Q9GZY4 146 aa8.62□□□□□ -1.03
SVIP-204ENST00000530199 KCNH6Q9H252 994 aa8.62□□□□□ -1.03
SVIP-204ENST00000530199 TRIT1Q9H3H1 467 aaKnown RBP8.62□□□□□ -1.03
SVIP-204ENST00000530199 METTL14Q9HCE5 456 aaKnown RBP8.62□□□□□ -1.03
SVIP-204ENST00000530199 U3KQE9 123 aa8.62□□□□□ -1.03
SVIP-204ENST00000530199 USP34Q70CQ2 3546 aa8.62□□□□□ -1.03
SVIP-204ENST00000530199 C2orf71A6NGG8 1288 aa8.61□□□□□ -1.03
SVIP-204ENST00000530199 PDHXO00330 501 aa8.61□□□□□ -1.03
SVIP-204ENST00000530199 ASLP04424 464 aa8.61□□□□□ -1.03
SVIP-204ENST00000530199 THBDP07204 575 aa8.61□□□□□ -1.03
SVIP-204ENST00000530199 IFNGR1P15260 489 aa8.61□□□□□ -1.03
SVIP-204ENST00000530199 VAV1P15498 845 aa8.61□□□□□ -1.03
SVIP-204ENST00000530199 POU3F2P20265 443 aaPredicted RBP8.61□□□□□ -1.03
SVIP-204ENST00000530199 NFKB2Q00653 900 aa8.61□□□□□ -1.03
SVIP-204ENST00000530199 TAF7Q15545 349 aaPredicted RBP8.61□□□□□ -1.03
SVIP-204ENST00000530199 NKPD1Q17RQ9 610 aa8.61□□□□□ -1.03
SVIP-204ENST00000530199 TTLL5Q6EMB2 1281 aa8.61□□□□□ -1.03
SVIP-204ENST00000530199 PPM1KQ8N3J5 372 aa8.61□□□□□ -1.03
SVIP-204ENST00000530199 PRPF38AQ8NAV1 312 aaKnown RBP8.61□□□□□ -1.03
SVIP-204ENST00000530199 NPLOC4Q8TAT6 608 aa8.61□□□□□ -1.03
SVIP-204ENST00000530199 MAGEB10Q96LZ2 347 aaPredicted RBP8.61□□□□□ -1.03
SVIP-204ENST00000530199 SLC12A9Q9BXP2 914 aa8.61□□□□□ -1.03
SVIP-204ENST00000530199 MKNK2Q9HBH9 465 aa8.61□□□□□ -1.03
SVIP-204ENST00000530199 GPRC5CQ9NQ84 441 aa8.61□□□□□ -1.03
SVIP-204ENST00000530199 TYW1Q9NV66 732 aaKnown RBP8.61□□□□□ -1.03
SVIP-204ENST00000530199 TRAF6Q9Y4K3 522 aa8.61□□□□□ -1.03
SVIP-204ENST00000530199 TNPO3Q9Y5L0 923 aaKnown RBP8.61□□□□□ -1.03
SVIP-204ENST00000530199 HTATSF1O43719 755 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms