RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 NECTIN1Q15223 517 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 ZNF484Q5JVG2 852 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 CLLU1OSQ5K130 101 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 RNF20Q5VTR2 975 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 WWC2Q6AWC2 1192 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 TYW1BQ6NUM6 668 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 HELQQ8TDG4 1101 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 AUTS2Q8WXX7 1259 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 TCEANC2Q96MN5 208 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 ANO3Q9BYT9 981 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 WDR81Q562E7 1941 aa12.86□□□□□ -0.35
SF3B2-208ENST00000529994 MEIS1O00470 390 aa12.85□□□□□ -0.35
SF3B2-208ENST00000529994 HOXA2O43364 376 aa12.85□□□□□ -0.35
SF3B2-208ENST00000529994 PI15O43692 258 aa12.85□□□□□ -0.35
SF3B2-208ENST00000529994 CXCL14O95715 111 aa12.85□□□□□ -0.35
SF3B2-208ENST00000529994 NLRP11P59045 1033 aaKnown RBP12.85□□□□□ -0.35
SF3B2-208ENST00000529994 CWF19L1Q69YN2 538 aaKnown RBP12.85□□□□□ -0.35
SF3B2-208ENST00000529994 MCTP2Q6DN12 878 aa12.85□□□□□ -0.35
SF3B2-208ENST00000529994 TMTC3Q6ZXV5 915 aa12.85□□□□□ -0.35
SF3B2-208ENST00000529994 MICU3Q86XE3 530 aa12.85□□□□□ -0.35
SF3B2-208ENST00000529994 ECHDC2Q86YB7 292 aa12.85□□□□□ -0.35
SF3B2-208ENST00000529994 SLC39A11Q8N1S5 342 aa12.85□□□□□ -0.35
SF3B2-208ENST00000529994 FANCBQ8NB91 859 aa12.85□□□□□ -0.35
SF3B2-208ENST00000529994 TMEM87BQ96K49 555 aa12.85□□□□□ -0.35
SF3B2-208ENST00000529994 NAP1L2Q9ULW6 460 aaPredicted RBP12.85□□□□□ -0.35
SF3B2-208ENST00000529994 AKT3Q9Y243 479 aa12.85□□□□□ -0.35
SF3B2-208ENST00000529994 ZNF292O60281 2723 aa12.85□□□□□ -0.35
SF3B2-208ENST00000529994 CACNA1AO00555 2505 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.84□□□□□ -0.35
SF3B2-208ENST00000529994 CALM1P0DP23 149 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 CALM2P0DP24 149 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 CALM3P0DP25 149 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 EPCAMP16422 314 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 ZSCAN20P17040 1043 aaPredicted RBP12.84□□□□□ -0.35
SF3B2-208ENST00000529994 FGFR4P22455 802 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 CLCN5P51795 746 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 BCAR1P56945 870 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 ATAT1Q5SQI0 421 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 MIS18BP1Q6P0N0 1132 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 TMC5Q6UXY8 1006 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 ERMP1Q7Z2K6 904 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 PLA2G4DQ86XP0 818 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 ZDHHC14Q8IZN3 488 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 VPS52Q8N1B4 723 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 TMTC2Q8N394 836 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 TMEM87AQ8NBN3 555 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 RIC8AQ9NPQ8 531 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 SLC12A7Q9Y666 1083 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 DMXL1Q9Y485 3027 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 DENND4AQ7Z401 1863 aa12.84□□□□□ -0.35
SF3B2-208ENST00000529994 C2orf16Q68DN1 1984 aa12.83□□□□□ -0.35
SF3B2-208ENST00000529994 FAM86B1E9PN63 330 aa12.83□□□□□ -0.36
SF3B2-208ENST00000529994 DHX15O43143 795 aaKnown RBP12.83□□□□□ -0.36
SF3B2-208ENST00000529994 CSDE1O75534 798 aaKnown RBP12.83□□□□□ -0.36
SF3B2-208ENST00000529994 EOMESO95936 686 aa12.83□□□□□ -0.36
SF3B2-208ENST00000529994 FOSP01100 380 aaPredicted RBP12.83□□□□□ -0.36
SF3B2-208ENST00000529994 FAM86B2P0C5J1 330 aa12.83□□□□□ -0.36
SF3B2-208ENST00000529994 ALDH7A1P49419 539 aaKnown RBP12.83□□□□□ -0.36
SF3B2-208ENST00000529994 ADCY7P51828 1080 aa12.83□□□□□ -0.36
SF3B2-208ENST00000529994 ADCK5Q3MIX3 580 aa12.83□□□□□ -0.36
SF3B2-208ENST00000529994 LONRF3Q496Y0 759 aa12.83□□□□□ -0.36
SF3B2-208ENST00000529994 KIAA1841Q6NSI8 718 aa12.83□□□□□ -0.36
SF3B2-208ENST00000529994 EFCAB12Q6NXP0 572 aa12.83□□□□□ -0.36
SF3B2-208ENST00000529994 FAM43BQ6ZT52 329 aaPredicted RBP12.83□□□□□ -0.36
SF3B2-208ENST00000529994 TMEM173Q86WV6 379 aaPredicted RBP12.83□□□□□ -0.36
SF3B2-208ENST00000529994 RASEFQ8IZ41 740 aa12.83□□□□□ -0.36
SF3B2-208ENST00000529994 PLCD3Q8N3E9 789 aa12.83□□□□□ -0.36
SF3B2-208ENST00000529994 LRRC71Q8N4P6 559 aa12.83□□□□□ -0.36
SF3B2-208ENST00000529994 BBXQ8WY36 941 aaPredicted RBP12.83□□□□□ -0.36
SF3B2-208ENST00000529994 ADAMTS10Q9H324 1103 aa12.83□□□□□ -0.36
SF3B2-208ENST00000529994 CNTNAP5Q8WYK1 1306 aa12.83□□□□□ -0.36
SF3B2-208ENST00000529994 SMCO2A6NFE2 343 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 SPDYE4A6NLX3 237 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 IPO5O00410 1097 aaKnown RBP12.82□□□□□ -0.36
SF3B2-208ENST00000529994 ZC3H11AO75152 810 aaKnown RBP eCLIP12.82□□□□□ -0.36
SF3B2-208ENST00000529994 CPA1P15085 419 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 NPR3P17342 541 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 SREBF1P36956 1147 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 FGD1P98174 961 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 ANGPT1Q15389 498 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 JAKMIP3Q5VZ66 844 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 SYNE3Q6ZMZ3 975 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 KCNG4Q8TDN1 519 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 TMEM169Q96HH4 297 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 SCLT1Q96NL6 688 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 MAP7D2Q96T17 732 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 MTA3Q9BTC8 594 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 ZBP1Q9H171 429 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 CYP26B1Q9NR63 512 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 DZANK1Q9NVP4 752 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 FBXL21Q9UKT6 434 aa12.82□□□□□ -0.36
SF3B2-208ENST00000529994 MAFBQ9Y5Q3 323 aaPredicted RBP12.82□□□□□ -0.36
SF3B2-208ENST00000529994 CENPBP07199 599 aaPredicted RBP12.81□□□□□ -0.36
SF3B2-208ENST00000529994 AOC1P19801 751 aa12.81□□□□□ -0.36
SF3B2-208ENST00000529994 EIF4BP23588 611 aaKnown RBP12.81□□□□□ -0.36
SF3B2-208ENST00000529994 LIFRP42702 1097 aa12.81□□□□□ -0.36
SF3B2-208ENST00000529994 BMS1Q14692 1282 aaKnown RBP12.81□□□□□ -0.36
SF3B2-208ENST00000529994 ZNF598Q86UK7 904 aaKnown RBP12.81□□□□□ -0.36
SF3B2-208ENST00000529994 CABP7Q86V35 215 aa12.81□□□□□ -0.36
SF3B2-208ENST00000529994 SIX5Q8N196 739 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms