RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 GJB5O95377 273 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 MYOGP15173 224 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 EIF4BP23588 611 aaKnown RBP14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 NFX1Q12986 1120 aaKnown RBP14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 EMC2Q15006 297 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 SF3A1Q15459 793 aaKnown RBP14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 ECM1Q16610 540 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 KRT79Q5XKE5 535 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 FAM173BQ6P4H8 233 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 POTEGQ6S5H5 508 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 RHPN2Q8IUC4 686 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 MYOCDQ8IZQ8 938 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 SPRYD3Q8NCJ5 442 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 SNX29Q8TEQ0 813 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 NLRP7Q8WX94 980 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 TMEM143Q96AN5 459 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 ZNF668Q96K58 619 aaPredicted RBP14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 ZBED2Q9BTP6 218 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 NKX2-4Q9H2Z4 354 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 TTYH1Q9H313 450 aaPredicted RBP14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 TMX1Q9H3N1 280 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 ARID2Q68CP9 1835 aa14.13□□□□□ -0.15
CCDC90B-216ENST00000529856 VWA3AA6NCI4 1184 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 PP2D1A8MPX8 630 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 ASAP2O43150 1006 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 TLL1O43897 1013 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 DARSP14868 501 aaKnown RBP14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 CDC25AP30304 524 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 ZNF410Q86VK4 478 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 FAM228AQ86W67 206 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 KSR1Q8IVT5 923 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 TCP11Q8WWU5 503 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 PRPF31Q8WWY3 499 aaKnown RBP14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 PSPC1Q8WXF1 523 aaKnown RBP14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 LINC01599Q8WXQ3 324 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 CCDC43Q96MW1 224 aaKnown RBP14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 RAD9AQ99638 391 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 MTRQ99707 1265 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 MMTAG2Q9BU76 263 aaKnown RBP14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 GCOM2Q9BZD3 368 aaPredicted RBP14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 ZNF576Q9H609 170 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 SLC28A3Q9HAS3 691 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 XPNPEP1Q9NQW7 623 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 MTMR10Q9NXD2 777 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 KIAA1024Q9UPX6 916 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 COL4A3BPQ9Y5P4 624 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 CLIC4Q9Y696 253 aa14.12□□□□□ -0.15
CCDC90B-216ENST00000529856 A0A087WZ62 844 aa14.11□□□□□ -0.15
CCDC90B-216ENST00000529856 TTC3P53804 2025 aa14.11□□□□□ -0.15
CCDC90B-216ENST00000529856 LAMTOR4Q0VGL1 99 aa14.11□□□□□ -0.15
CCDC90B-216ENST00000529856 PTPAQ15257 358 aa14.11□□□□□ -0.15
CCDC90B-216ENST00000529856 FAM117BQ6P1L5 589 aa14.11□□□□□ -0.15
CCDC90B-216ENST00000529856 FAM161BQ96MY7 647 aa14.11□□□□□ -0.15
CCDC90B-216ENST00000529856 SCLT1Q96NL6 688 aa14.11□□□□□ -0.15
CCDC90B-216ENST00000529856 FDXACB1Q9BRP7 624 aaPredicted RBP14.11□□□□□ -0.15
CCDC90B-216ENST00000529856 TSPYL2Q9H2G4 693 aaPredicted RBP14.11□□□□□ -0.15
CCDC90B-216ENST00000529856 ATP6V0A4Q9HBG4 840 aa14.11□□□□□ -0.15
CCDC90B-216ENST00000529856 DDX19AQ9NUU7 478 aaKnown RBP14.11□□□□□ -0.15
CCDC90B-216ENST00000529856 INSL6Q9Y581 213 aa14.11□□□□□ -0.15
CCDC90B-216ENST00000529856 MGEA5O60502 916 aa14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 UPP2O95045 317 aa14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 CA3P07451 260 aa14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 ZSCAN22P10073 491 aaPredicted RBP14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 ARL2P36404 184 aa14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 HTRA4P83105 476 aaPredicted RBP14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 DSC3Q14574 896 aa14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 MXD4Q14582 209 aaPredicted RBP14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 HYIQ5T013 277 aa14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 PADI6Q6TGC4 694 aa14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 CRIPAKQ8N1N5 446 aa14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 AK8Q96MA6 479 aa14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 NLRP4Q96MN2 994 aa14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 ADAM2Q99965 735 aa14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 INO80BQ9C086 356 aaPredicted RBP14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 IFT122Q9HBG6 1241 aa14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 RGS18Q9NS28 235 aa14.1□□□□□ -0.15
CCDC90B-216ENST00000529856 LCHNA4D1U4 455 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 ARHGEF35A5YM69 484 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 USO1O60763 962 aaKnown RBP14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 CSDE1O75534 798 aaKnown RBP14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 SLC34A2O95436 690 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 EYA4O95677 639 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 SRGAP2CP0DJJ0 459 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 CYP11B2P19099 503 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 FGFR4P22455 802 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 LONP1P36776 959 aaKnown RBP14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 GRIN1Q05586 938 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 POU5F1BQ06416 359 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 GRIN2CQ14957 1233 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 PPP2R2DQ66LE6 453 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 SRGAP1Q7Z6B7 1085 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 KCTD17Q8N5Z5 321 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 MCPH1Q8NEM0 835 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 GUCD1Q96NT3 240 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 PNMA5Q96PV4 448 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 USP28Q96RU2 1077 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 BHMT2Q9H2M3 363 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 C1orf112Q9NSG2 853 aa14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 DNM3Q9UQ16 869 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms