RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 SLC8A3P57103 927 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 SPICE1Q8N0Z3 855 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 ADAM7Q9H2U9 754 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 LUC7LQ9NQ29 371 aaKnown RBP15.41■□□□□ 0.06
USP48-213ENST00000529637 CEP72Q9P209 647 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 TLDC2A0PJX2 215 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 BHMG1C9JSJ3 638 aaPredicted RBP15.41■□□□□ 0.06
USP48-213ENST00000529637 DIAPH2O60879 1101 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 ZNF76P36508 570 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 KLHL30Q0D2K2 578 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 CERKLQ49MI3 558 aaPredicted RBP15.41■□□□□ 0.06
USP48-213ENST00000529637 DCAF17Q5H9S7 520 aaPredicted RBP15.41■□□□□ 0.06
USP48-213ENST00000529637 EGFL6Q8IUX8 553 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 RNF217Q8TC41 542 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 TLCD1Q96CP7 247 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 CRAMP1Q96RY5 1269 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 KCNQ5Q9NR82 932 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 COL24A1Q17RW2 1714 aa15.41■□□□□ 0.06
USP48-213ENST00000529637 ENO4A6NNW6 628 aa15.4■□□□□ 0.06
USP48-213ENST00000529637 CETN3O15182 167 aa15.4■□□□□ 0.06
USP48-213ENST00000529637 NR2F2P24468 414 aa15.4■□□□□ 0.06
USP48-213ENST00000529637 IFI35P80217 286 aaPredicted RBP15.4■□□□□ 0.06
USP48-213ENST00000529637 C11orf91Q3C1V1 193 aa15.4■□□□□ 0.06
USP48-213ENST00000529637 COBLL1Q53SF7 1204 aa15.4■□□□□ 0.06
USP48-213ENST00000529637 PPP1R18Q6NYC8 613 aa15.4■□□□□ 0.06
USP48-213ENST00000529637 ARMC9Q7Z3E5 817 aa15.4■□□□□ 0.06
USP48-213ENST00000529637 SP8Q8IXZ3 490 aa15.4■□□□□ 0.06
USP48-213ENST00000529637 PROM2Q8N271 834 aa15.4■□□□□ 0.06
USP48-213ENST00000529637 SPAG5Q96R06 1193 aa15.4■□□□□ 0.06
USP48-213ENST00000529637 TRPC6Q9Y210 931 aa15.4■□□□□ 0.06
USP48-213ENST00000529637 IFNAR2P48551 515 aa15.4■□□□□ 0.06
USP48-213ENST00000529637 USP11P51784 963 aa15.4■□□□□ 0.06
USP48-213ENST00000529637 PTK2Q05397 1052 aa15.4■□□□□ 0.06
USP48-213ENST00000529637 SEPT2Q15019 361 aa15.4■□□□□ 0.06
USP48-213ENST00000529637 MAEAQ7L5Y9 396 aa15.4■□□□□ 0.06
USP48-213ENST00000529637 ADAT2Q7Z6V5 191 aaKnown RBP15.4■□□□□ 0.06
USP48-213ENST00000529637 UHMK1Q8TAS1 419 aaKnown RBP15.4■□□□□ 0.06
USP48-213ENST00000529637 ATXN2LQ8WWM7 1075 aaKnown RBP15.4■□□□□ 0.06
USP48-213ENST00000529637 L3MBTL3Q96JM7 780 aaPredicted RBP15.4■□□□□ 0.06
USP48-213ENST00000529637 SPDYE3A6NKU9 549 aa15.39■□□□□ 0.06
USP48-213ENST00000529637 MED24O75448 989 aa15.39■□□□□ 0.06
USP48-213ENST00000529637 ACTN1P12814 892 aa15.39■□□□□ 0.06
USP48-213ENST00000529637 KIF2BQ8N4N8 673 aa15.39■□□□□ 0.06
USP48-213ENST00000529637 PRMT1Q99873 361 aaKnown RBP15.39■□□□□ 0.06
USP48-213ENST00000529637 EPB41L4BQ9H329 900 aa15.39■□□□□ 0.06
USP48-213ENST00000529637 KCNMB3Q9NPA1 279 aa15.39■□□□□ 0.06
USP48-213ENST00000529637 CD2APQ9Y5K6 639 aa15.39■□□□□ 0.06
USP48-213ENST00000529637 SBF2Q86WG5 1849 aa15.39■□□□□ 0.05
USP48-213ENST00000529637 IGKV6D-41A0A0C4DH26 115 aa15.39■□□□□ 0.05
USP48-213ENST00000529637 CRKP46108 304 aa15.39■□□□□ 0.05
USP48-213ENST00000529637 PIGWQ7Z7B1 504 aa15.39■□□□□ 0.05
USP48-213ENST00000529637 LRRC57Q8N9N7 239 aa15.39■□□□□ 0.05
USP48-213ENST00000529637 ACTRT1Q8TDG2 376 aa15.39■□□□□ 0.05
USP48-213ENST00000529637 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.39■□□□□ 0.051e-6■■■■■ 32.8
USP48-213ENST00000529637 PGRMC1O00264 195 aaKnown RBP15.39■□□□□ 0.05
USP48-213ENST00000529637 POLRMTO00411 1230 aaKnown RBP15.39■□□□□ 0.05
USP48-213ENST00000529637 HOXA10P31260 410 aaPredicted RBP15.39■□□□□ 0.05
USP48-213ENST00000529637 HOXA13P31271 388 aaPredicted RBP15.39■□□□□ 0.05
USP48-213ENST00000529637 ICA1Q05084 483 aa15.39■□□□□ 0.05
USP48-213ENST00000529637 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.39■□□□□ 0.051e-7■■□□□ 11.4
USP48-213ENST00000529637 CYP11B2P19099 503 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 NOVP48745 357 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 ALDH5A1P51649 535 aaPredicted RBP15.38■□□□□ 0.05
USP48-213ENST00000529637 PSMC6P62333 389 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 IRX1P78414 480 aaPredicted RBP15.38■□□□□ 0.05
USP48-213ENST00000529637 ARHGAP4P98171 946 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 ZNF571Q7Z3V5 609 aaPredicted RBP15.38■□□□□ 0.05
USP48-213ENST00000529637 EIF1ADQ8N9N8 165 aaKnown RBP15.38■□□□□ 0.05
USP48-213ENST00000529637 MICAL1Q8TDZ2 1067 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 SCFD1Q8WVM8 642 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 P3H4Q92791 437 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 DNM3Q9UQ16 869 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 UBOX5O94941 541 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 KCNH2Q12809 1159 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 ASIC2Q16515 512 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 CDCA2Q69YH5 1023 aaPredicted RBP15.38■□□□□ 0.05
USP48-213ENST00000529637 APOBEC3HQ6NTF7 200 aaKnown RBP15.38■□□□□ 0.05
USP48-213ENST00000529637 TRPM8Q7Z2W7 1104 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 ARMC2Q8NEN0 867 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 ERMNQ8TAM6 284 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 ATP8B4Q8TF62 1192 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 GOPCQ9HD26 462 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 VIMP08670 466 aaKnown RBP15.38■□□□□ 0.05
USP48-213ENST00000529637 CLK2P49760 499 aaKnown RBP15.38■□□□□ 0.05
USP48-213ENST00000529637 MTMR3Q13615 1198 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 ANKS4BQ8N8V4 417 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 PARD3BQ8TEW8 1205 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 CCDC17Q96LX7 622 aa15.38■□□□□ 0.05
USP48-213ENST00000529637 ABCB11O95342 1321 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 HGSO14964 777 aaPredicted RBP15.37■□□□□ 0.05
USP48-213ENST00000529637 CASP5P51878 434 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 ZKSCAN8Q15776 578 aaPredicted RBP15.37■□□□□ 0.05
USP48-213ENST00000529637 CRELD2Q6UXH1 353 aaPredicted RBP15.37■□□□□ 0.05
USP48-213ENST00000529637 ERICH1Q86X53 443 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 SFR1Q86XK3 245 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 DHX36Q9H2U1 1008 aaKnown RBP15.37■□□□□ 0.05
USP48-213ENST00000529637 ARHGEF10LQ9HCE6 1279 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 ARMCX3Q9UH62 379 aaPredicted RBP15.37■□□□□ 0.05
USP48-213ENST00000529637 TRIM33Q9UPN9 1127 aa15.37■□□□□ 0.05
USP48-213ENST00000529637 PLIN4Q96Q06 1357 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms