RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 RBM23Q86U06 439 aaKnown RBP29.15■■■□□ 2.26
TRIM3-206ENST00000528227 FAM177A1Q8N128 213 aaPredicted RBP29.15■■■□□ 2.26
TRIM3-206ENST00000528227 CWH43Q9H720 699 aa29.15■■■□□ 2.26
TRIM3-206ENST00000528227 CLEC1BQ9P126 229 aa29.15■■■□□ 2.26
TRIM3-206ENST00000528227 PRR33A8MZF0 331 aa29.14■■■□□ 2.26
TRIM3-206ENST00000528227 DCXO43602 365 aa29.14■■■□□ 2.26
TRIM3-206ENST00000528227 FGF18O76093 207 aa29.14■■■□□ 2.26
TRIM3-206ENST00000528227 TBC1D8BQ0IIM8 1120 aa29.14■■■□□ 2.26
TRIM3-206ENST00000528227 STK3Q13188 491 aa29.14■■■□□ 2.26
TRIM3-206ENST00000528227 TARBP2Q15633 366 aaKnown RBP29.14■■■□□ 2.26
TRIM3-206ENST00000528227 CSPP1Q1MSJ5 1256 aa29.14■■■□□ 2.26
TRIM3-206ENST00000528227 MIER3Q7Z3K6 550 aa29.14■■■□□ 2.26
TRIM3-206ENST00000528227 ZNF668Q96K58 619 aaPredicted RBP29.14■■■□□ 2.26
TRIM3-206ENST00000528227 MBOAT7Q96N66 472 aa29.14■■■□□ 2.26
TRIM3-206ENST00000528227 AIFM3Q96NN9 605 aa29.14■■■□□ 2.26
TRIM3-206ENST00000528227 POP1Q99575 1024 aaKnown RBP29.14■■■□□ 2.26
TRIM3-206ENST00000528227 TMEM117Q9H0C3 514 aa29.14■■■□□ 2.26
TRIM3-206ENST00000528227 TLR9Q9NR96 1032 aa29.14■■■□□ 2.26
TRIM3-206ENST00000528227 RNF19AQ9NV58 838 aa29.14■■■□□ 2.26
TRIM3-206ENST00000528227 EYA4O95677 639 aa29.13■■■□□ 2.25
TRIM3-206ENST00000528227 ZSCAN20P17040 1043 aaPredicted RBP29.13■■■□□ 2.25
TRIM3-206ENST00000528227 GALNT17Q6IS24 598 aa29.13■■■□□ 2.25
TRIM3-206ENST00000528227 MOXD1Q6UVY6 613 aa29.13■■■□□ 2.25
TRIM3-206ENST00000528227 THNSL1Q8IYQ7 743 aa29.13■■■□□ 2.25
TRIM3-206ENST00000528227 HOXA2O43364 376 aa29.12■■■□□ 2.25
TRIM3-206ENST00000528227 GLP2RO95838 553 aa29.12■■■□□ 2.25
TRIM3-206ENST00000528227 DARSP14868 501 aaKnown RBP29.12■■■□□ 2.25
TRIM3-206ENST00000528227 LAG3P18627 525 aa29.12■■■□□ 2.25
TRIM3-206ENST00000528227 CPLX2Q6PUV4 134 aaKnown RBP29.12■■■□□ 2.25
TRIM3-206ENST00000528227 ETNPPLQ8TBG4 499 aa29.12■■■□□ 2.25
TRIM3-206ENST00000528227 MICAL1Q8TDZ2 1067 aa29.12■■■□□ 2.25
TRIM3-206ENST00000528227 CASD1Q96PB1 797 aa29.12■■■□□ 2.25
TRIM3-206ENST00000528227 NIFKQ9BYG3 293 aaKnown RBP29.12■■■□□ 2.25
TRIM3-206ENST00000528227 SEPT9Q9UHD8 586 aaPredicted RBP29.12■■■□□ 2.25
TRIM3-206ENST00000528227 STBD1O95210 358 aa29.11■■■□□ 2.25
TRIM3-206ENST00000528227 ERVFC1P60507 584 aa29.11■■■□□ 2.25
TRIM3-206ENST00000528227 COASYQ13057 564 aa29.11■■■□□ 2.25
TRIM3-206ENST00000528227 XKR3Q5GH77 459 aa29.11■■■□□ 2.25
TRIM3-206ENST00000528227 LRRC55Q6ZSA7 311 aa29.11■■■□□ 2.25
TRIM3-206ENST00000528227 ECHDC2Q86YB7 292 aa29.11■■■□□ 2.25
TRIM3-206ENST00000528227 SMRP1Q8NCR6 262 aa29.11■■■□□ 2.25
TRIM3-206ENST00000528227 SCLT1Q96NL6 688 aa29.11■■■□□ 2.25
TRIM3-206ENST00000528227 TLE6Q9H808 572 aa29.11■■■□□ 2.25
TRIM3-206ENST00000528227 PDRG1Q9NUG6 133 aa29.11■■■□□ 2.25
TRIM3-206ENST00000528227 DRP2Q13474 957 aa29.1■■■□□ 2.25
TRIM3-206ENST00000528227 NONOQ15233 471 aaKnown RBP eCLIP29.1■■■□□ 2.25
TRIM3-206ENST00000528227 MTERF2Q49AM1 385 aa29.1■■■□□ 2.25
TRIM3-206ENST00000528227 NLRP7Q8WX94 980 aa29.1■■■□□ 2.25
TRIM3-206ENST00000528227 CEP89Q96ST8 783 aa29.1■■■□□ 2.25
TRIM3-206ENST00000528227 BARX2Q9UMQ3 279 aaPredicted RBP29.1■■■□□ 2.25
TRIM3-206ENST00000528227 TMEM150BA6NC51 233 aa29.09■■■□□ 2.25
TRIM3-206ENST00000528227 FSCN2O14926 492 aa29.09■■■□□ 2.25
TRIM3-206ENST00000528227 FGFR4P22455 802 aa29.09■■■□□ 2.25
TRIM3-206ENST00000528227 PLCB3Q01970 1234 aa29.09■■■□□ 2.25
TRIM3-206ENST00000528227 PDE12Q6L8Q7 609 aaKnown RBP29.09■■■□□ 2.25
TRIM3-206ENST00000528227 KRT25Q7Z3Z0 450 aa29.09■■■□□ 2.25
TRIM3-206ENST00000528227 LRRC43Q8N309 656 aa29.09■■■□□ 2.25
TRIM3-206ENST00000528227 DDX25Q9UHL0 483 aaKnown RBP29.09■■■□□ 2.25
TRIM3-206ENST00000528227 LZTS1Q9Y250 596 aa29.09■■■□□ 2.25
TRIM3-206ENST00000528227 C5orf42Q9H799 3197 aa29.09■■■□□ 2.25
TRIM3-206ENST00000528227 IGKV6-21A0A0C4DH24 114 aa29.08■■■□□ 2.25
TRIM3-206ENST00000528227 PER2O15055 1255 aa29.08■■■□□ 2.25
TRIM3-206ENST00000528227 INF2Q27J81 1249 aa29.08■■■□□ 2.25
TRIM3-206ENST00000528227 ABI1Q8IZP0 508 aa29.08■■■□□ 2.25
TRIM3-206ENST00000528227 MRPS27Q92552 414 aaKnown RBP29.08■■■□□ 2.25
TRIM3-206ENST00000528227 KCNJ14Q9UNX9 436 aa29.08■■■□□ 2.25
TRIM3-206ENST00000528227 SLC37A4O43826 429 aa29.07■■■□□ 2.24
TRIM3-206ENST00000528227 SCRN1Q12765 414 aa29.07■■■□□ 2.24
TRIM3-206ENST00000528227 DUSP6Q16828 381 aa29.07■■■□□ 2.24
TRIM3-206ENST00000528227 CLLU1OSQ5K130 101 aa29.07■■■□□ 2.24
TRIM3-206ENST00000528227 CDCA3Q99618 268 aaPredicted RBP29.07■■■□□ 2.24
TRIM3-206ENST00000528227 SH2D3AQ9BRG2 576 aa29.07■■■□□ 2.24
TRIM3-206ENST00000528227 PHF20Q9BVI0 1012 aa29.07■■■□□ 2.24
TRIM3-206ENST00000528227 A0A0U1RQF3 1178 aa29.06■■■□□ 2.24
TRIM3-206ENST00000528227 FSD2A1L4K1 749 aa29.06■■■□□ 2.24
TRIM3-206ENST00000528227 CSDE1O75534 798 aaKnown RBP29.06■■■□□ 2.24
TRIM3-206ENST00000528227 RBM10P98175 930 aaKnown RBP29.06■■■□□ 2.24
TRIM3-206ENST00000528227 CDC42EP1Q00587 391 aa29.06■■■□□ 2.24
TRIM3-206ENST00000528227 KCNT2Q6UVM3 1135 aa29.06■■■□□ 2.24
TRIM3-206ENST00000528227 ZNF598Q86UK7 904 aaKnown RBP29.06■■■□□ 2.24
TRIM3-206ENST00000528227 RNF169Q8NCN4 708 aa29.06■■■□□ 2.24
TRIM3-206ENST00000528227 VN1R2Q8NFZ6 395 aa29.06■■■□□ 2.24
TRIM3-206ENST00000528227 GCOM2Q9BZD3 368 aaPredicted RBP29.06■■■□□ 2.24
TRIM3-206ENST00000528227 CDKL5O76039 1030 aa29.05■■■□□ 2.24
TRIM3-206ENST00000528227 EOMESO95936 686 aa29.05■■■□□ 2.24
TRIM3-206ENST00000528227 LETM2Q2VYF4 491 aa29.05■■■□□ 2.24
TRIM3-206ENST00000528227 RNF135Q8IUD6 432 aa29.05■■■□□ 2.24
TRIM3-206ENST00000528227 ZNF558Q96NG5 402 aa29.05■■■□□ 2.24
TRIM3-206ENST00000528227 DACT1Q9NYF0 836 aa29.05■■■□□ 2.24
TRIM3-206ENST00000528227 PUF60Q9UHX1 559 aaKnown RBP29.05■■■□□ 2.24
TRIM3-206ENST00000528227 MUTYHQ9UIF7 546 aa29.05■■■□□ 2.24
TRIM3-206ENST00000528227 USP15Q9Y4E8 981 aaPredicted RBP29.05■■■□□ 2.24
TRIM3-206ENST00000528227 STK36Q9NRP7 1315 aa29.04■■■□□ 2.24
TRIM3-206ENST00000528227 DDX11L8A8MPP1 907 aa29.04■■■□□ 2.24
TRIM3-206ENST00000528227 MAFO75444 373 aaPredicted RBP29.04■■■□□ 2.24
TRIM3-206ENST00000528227 ATF7P17544 494 aaPredicted RBP29.04■■■□□ 2.24
TRIM3-206ENST00000528227 PPM1AP35813 382 aa29.04■■■□□ 2.24
TRIM3-206ENST00000528227 PBX3P40426 434 aa29.04■■■□□ 2.24
TRIM3-206ENST00000528227 DNM2P50570 870 aa29.04■■■□□ 2.24
TRIM3-206ENST00000528227 PSMC5P62195 406 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms