RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 TLR9Q9NR96 1032 aa25.22■■□□□ 1.63
TRAPPC4-208ENST00000527680 PCDHGC5Q9Y5F6 944 aa25.22■■□□□ 1.63
TRAPPC4-208ENST00000527680 C19orf67A6NJJ6 358 aa25.21■■□□□ 1.63
TRAPPC4-208ENST00000527680 PRR33A8MZF0 331 aa25.21■■□□□ 1.63
TRAPPC4-208ENST00000527680 PER2O15055 1255 aa25.21■■□□□ 1.63
TRAPPC4-208ENST00000527680 HOXA2O43364 376 aa25.21■■□□□ 1.63
TRAPPC4-208ENST00000527680 TMEM117Q9H0C3 514 aa25.21■■□□□ 1.63
TRAPPC4-208ENST00000527680 PDRG1Q9NUG6 133 aa25.21■■□□□ 1.63
TRAPPC4-208ENST00000527680 HCSTQ9UBK5 93 aa25.21■■□□□ 1.63
TRAPPC4-208ENST00000527680 SEPT9Q9UHD8 586 aaPredicted RBP25.21■■□□□ 1.63
TRAPPC4-208ENST00000527680 PUF60Q9UHX1 559 aaKnown RBP25.21■■□□□ 1.63
TRAPPC4-208ENST00000527680 PLXNA4Q9HCM2 1894 aa25.2■■□□□ 1.62
TRAPPC4-208ENST00000527680 PSMD10O75832 226 aa25.2■■□□□ 1.62
TRAPPC4-208ENST00000527680 TDP2O95551 362 aa25.2■■□□□ 1.62
TRAPPC4-208ENST00000527680 LAG3P18627 525 aa25.2■■□□□ 1.62
TRAPPC4-208ENST00000527680 MTERF2Q49AM1 385 aa25.2■■□□□ 1.62
TRAPPC4-208ENST00000527680 LINC01465Q8N7H1 131 aa25.2■■□□□ 1.62
TRAPPC4-208ENST00000527680 RDM1Q8NG50 284 aa25.2■■□□□ 1.62
TRAPPC4-208ENST00000527680 TM6SF1Q9BZW5 370 aa25.2■■□□□ 1.62
TRAPPC4-208ENST00000527680 DDX11L8A8MPP1 907 aa25.19■■□□□ 1.62
TRAPPC4-208ENST00000527680 DNM2P50570 870 aa25.19■■□□□ 1.62
TRAPPC4-208ENST00000527680 GPC3P51654 580 aa25.19■■□□□ 1.62
TRAPPC4-208ENST00000527680 ERVFC1P60507 584 aa25.19■■□□□ 1.62
TRAPPC4-208ENST00000527680 NONOQ15233 471 aaKnown RBP eCLIP25.19■■□□□ 1.62
TRAPPC4-208ENST00000527680 XKR3Q5GH77 459 aa25.19■■□□□ 1.62
TRAPPC4-208ENST00000527680 GALNT17Q6IS24 598 aa25.19■■□□□ 1.62
TRAPPC4-208ENST00000527680 MSLNLQ96KJ4 702 aa25.19■■□□□ 1.62
TRAPPC4-208ENST00000527680 AIFM3Q96NN9 605 aa25.19■■□□□ 1.62
TRAPPC4-208ENST00000527680 CWH43Q9H720 699 aa25.19■■□□□ 1.62
TRAPPC4-208ENST00000527680 CLEC1BQ9P126 229 aa25.19■■□□□ 1.62
TRAPPC4-208ENST00000527680 ARIH1Q9Y4X5 557 aaPredicted RBP25.19■■□□□ 1.62
TRAPPC4-208ENST00000527680 CYP3A7-CYP3A51PA0A087WV96 503 aa25.18■■□□□ 1.62
TRAPPC4-208ENST00000527680 DARSP14868 501 aaKnown RBP25.18■■□□□ 1.62
TRAPPC4-208ENST00000527680 FGFR4P22455 802 aa25.18■■□□□ 1.62
TRAPPC4-208ENST00000527680 CYP3A7P24462 503 aa25.18■■□□□ 1.62
TRAPPC4-208ENST00000527680 PDE12Q6L8Q7 609 aaKnown RBP25.18■■□□□ 1.62
TRAPPC4-208ENST00000527680 ECHDC2Q86YB7 292 aa25.18■■□□□ 1.62
TRAPPC4-208ENST00000527680 CASD1Q96PB1 797 aa25.18■■□□□ 1.62
TRAPPC4-208ENST00000527680 SLKQ9H2G2 1235 aaPredicted RBP25.18■■□□□ 1.62
TRAPPC4-208ENST00000527680 BARX2Q9UMQ3 279 aaPredicted RBP25.18■■□□□ 1.62
TRAPPC4-208ENST00000527680 CSDE1O75534 798 aaKnown RBP25.17■■□□□ 1.62
TRAPPC4-208ENST00000527680 EYA4O95677 639 aa25.17■■□□□ 1.62
TRAPPC4-208ENST00000527680 CDC42EP1Q00587 391 aa25.17■■□□□ 1.62
TRAPPC4-208ENST00000527680 KRT17Q04695 432 aa25.17■■□□□ 1.62
TRAPPC4-208ENST00000527680 INF2Q27J81 1249 aa25.17■■□□□ 1.62
TRAPPC4-208ENST00000527680 SH2D3AQ9BRG2 576 aa25.17■■□□□ 1.62
TRAPPC4-208ENST00000527680 NIFKQ9BYG3 293 aaKnown RBP25.17■■□□□ 1.62
TRAPPC4-208ENST00000527680 GCOM2Q9BZD3 368 aaPredicted RBP25.17■■□□□ 1.62
TRAPPC4-208ENST00000527680 DDX25Q9UHL0 483 aaKnown RBP25.17■■□□□ 1.62
TRAPPC4-208ENST00000527680 KCNJ14Q9UNX9 436 aa25.17■■□□□ 1.62
TRAPPC4-208ENST00000527680 COASYQ13057 564 aa25.16■■□□□ 1.62
TRAPPC4-208ENST00000527680 TARBP2Q15633 366 aaKnown RBP25.16■■□□□ 1.62
TRAPPC4-208ENST00000527680 LETM2Q2VYF4 491 aa25.16■■□□□ 1.62
TRAPPC4-208ENST00000527680 PLPP4Q5VZY2 271 aa25.16■■□□□ 1.62
TRAPPC4-208ENST00000527680 KCNT2Q6UVM3 1135 aa25.16■■□□□ 1.62
TRAPPC4-208ENST00000527680 LRRC55Q6ZSA7 311 aa25.16■■□□□ 1.62
TRAPPC4-208ENST00000527680 KRT25Q7Z3Z0 450 aa25.16■■□□□ 1.62
TRAPPC4-208ENST00000527680 RNF135Q8IUD6 432 aa25.16■■□□□ 1.62
TRAPPC4-208ENST00000527680 DAGLBQ8NCG7 672 aa25.16■■□□□ 1.62
TRAPPC4-208ENST00000527680 MRPS27Q92552 414 aaKnown RBP25.16■■□□□ 1.62
TRAPPC4-208ENST00000527680 ZNF558Q96NG5 402 aa25.16■■□□□ 1.62
TRAPPC4-208ENST00000527680 ENTPD7Q9NQZ7 604 aa25.16■■□□□ 1.62
TRAPPC4-208ENST00000527680 DACT1Q9NYF0 836 aa25.16■■□□□ 1.62
TRAPPC4-208ENST00000527680 CCDC194A0A1B0GVG4 234 aa25.15■■□□□ 1.62
TRAPPC4-208ENST00000527680 TMEM150BA6NC51 233 aa25.15■■□□□ 1.62
TRAPPC4-208ENST00000527680 M0R2N6 131 aa25.15■■□□□ 1.62
TRAPPC4-208ENST00000527680 CDKL5O76039 1030 aa25.15■■□□□ 1.62
TRAPPC4-208ENST00000527680 XBP1P17861 261 aa25.15■■□□□ 1.62
TRAPPC4-208ENST00000527680 DRP2Q13474 957 aa25.15■■□□□ 1.62
TRAPPC4-208ENST00000527680 FAM177A1Q8N128 213 aaPredicted RBP25.15■■□□□ 1.62
TRAPPC4-208ENST00000527680 LRRC43Q8N309 656 aa25.15■■□□□ 1.62
TRAPPC4-208ENST00000527680 SMRP1Q8NCR6 262 aa25.15■■□□□ 1.62
TRAPPC4-208ENST00000527680 CDCA3Q99618 268 aaPredicted RBP25.15■■□□□ 1.62
TRAPPC4-208ENST00000527680 MUTYHQ9UIF7 546 aa25.15■■□□□ 1.62
TRAPPC4-208ENST00000527680 A0A0U1RQF3 1178 aa25.14■■□□□ 1.62
TRAPPC4-208ENST00000527680 FSD2A1L4K1 749 aa25.14■■□□□ 1.62
TRAPPC4-208ENST00000527680 MARCH6O60337 910 aa25.14■■□□□ 1.62
TRAPPC4-208ENST00000527680 GLP2RO95838 553 aa25.14■■□□□ 1.62
TRAPPC4-208ENST00000527680 EOMESO95936 686 aa25.14■■□□□ 1.62
TRAPPC4-208ENST00000527680 PLCB3Q01970 1234 aa25.14■■□□□ 1.62
TRAPPC4-208ENST00000527680 DUSP6Q16828 381 aa25.14■■□□□ 1.62
TRAPPC4-208ENST00000527680 MOXD1Q6UVY6 613 aa25.14■■□□□ 1.62
TRAPPC4-208ENST00000527680 RHPN2Q8IUC4 686 aa25.14■■□□□ 1.62
TRAPPC4-208ENST00000527680 ETNPPLQ8TBG4 499 aa25.14■■□□□ 1.62
TRAPPC4-208ENST00000527680 TCF25Q9BQ70 676 aa25.14■■□□□ 1.62
TRAPPC4-208ENST00000527680 RNF19AQ9NV58 838 aa25.14■■□□□ 1.62
TRAPPC4-208ENST00000527680 SPG21Q9NZD8 308 aa25.14■■□□□ 1.62
TRAPPC4-208ENST00000527680 SUCLA2Q9P2R7 463 aaPredicted RBP25.14■■□□□ 1.62
TRAPPC4-208ENST00000527680 LZTS1Q9Y250 596 aa25.14■■□□□ 1.62
TRAPPC4-208ENST00000527680 C5orf42Q9H799 3197 aa25.13■■□□□ 1.61
TRAPPC4-208ENST00000527680 A0A087WZ62 844 aa25.13■■□□□ 1.61
TRAPPC4-208ENST00000527680 NEFLP07196 543 aa25.13■■□□□ 1.61
TRAPPC4-208ENST00000527680 SRGAP2BP0DMP2 458 aa25.13■■□□□ 1.61
TRAPPC4-208ENST00000527680 PPM1AP35813 382 aa25.13■■□□□ 1.61
TRAPPC4-208ENST00000527680 PBX3P40426 434 aa25.13■■□□□ 1.61
TRAPPC4-208ENST00000527680 PSMC5P62195 406 aa25.13■■□□□ 1.61
TRAPPC4-208ENST00000527680 RBM10P98175 930 aaKnown RBP25.13■■□□□ 1.61
TRAPPC4-208ENST00000527680 TMC7Q7Z402 723 aa25.13■■□□□ 1.61
TRAPPC4-208ENST00000527680 HELQQ8TDG4 1101 aa25.13■■□□□ 1.61
TRAPPC4-208ENST00000527680 FDXACB1Q9BRP7 624 aaPredicted RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms