RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 VPS36Q86VN1 386 aa22.2■■□□□ 1.15
SMIM3-201ENST00000526627 LDHDQ86WU2 507 aa22.2■■□□□ 1.15
SMIM3-201ENST00000526627 LXNQ9BS40 222 aa22.2■■□□□ 1.15
SMIM3-201ENST00000526627 GLIS2Q9BZE0 524 aaPredicted RBP22.2■■□□□ 1.15
SMIM3-201ENST00000526627 DNAJC12Q9UKB3 198 aa22.2■■□□□ 1.15
SMIM3-201ENST00000526627 BHMG1C9JSJ3 638 aaPredicted RBP22.2■■□□□ 1.14
SMIM3-201ENST00000526627 CEP104O60308 925 aa22.2■■□□□ 1.14
SMIM3-201ENST00000526627 GALCP54803 685 aa22.2■■□□□ 1.14
SMIM3-201ENST00000526627 SETQ01105 290 aaPredicted RBP22.2■■□□□ 1.14
SMIM3-201ENST00000526627 DRAP1Q14919 205 aaPredicted RBP22.2■■□□□ 1.14
SMIM3-201ENST00000526627 ODR4Q5SWX8 454 aa22.2■■□□□ 1.14
SMIM3-201ENST00000526627 CCDC43Q96MW1 224 aaKnown RBP22.2■■□□□ 1.14
SMIM3-201ENST00000526627 TEKT3Q9BXF9 490 aa22.2■■□□□ 1.14
SMIM3-201ENST00000526627 EHMT1Q9H9B1 1298 aa22.2■■□□□ 1.14
SMIM3-201ENST00000526627 MYH11P35749 1972 aa22.2■■□□□ 1.14
SMIM3-201ENST00000526627 C21orf2O43822 256 aa22.19■■□□□ 1.14
SMIM3-201ENST00000526627 PPP1R12BO60237 982 aaPredicted RBP22.19■■□□□ 1.14
SMIM3-201ENST00000526627 TRIM49P0CI25 452 aa22.19■■□□□ 1.14
SMIM3-201ENST00000526627 TRIM49CP0CI26 452 aa22.19■■□□□ 1.14
SMIM3-201ENST00000526627 SPDYE2Q495Y8 402 aa22.19■■□□□ 1.14
SMIM3-201ENST00000526627 HS2ST1Q7LGA3 356 aa22.19■■□□□ 1.14
SMIM3-201ENST00000526627 DEFB129Q9H1M3 183 aa22.19■■□□□ 1.14
SMIM3-201ENST00000526627 IPO5O00410 1097 aaKnown RBP22.19■■□□□ 1.14
SMIM3-201ENST00000526627 ITGB5P18084 799 aa22.19■■□□□ 1.14
SMIM3-201ENST00000526627 NPEPPSP55786 919 aa22.19■■□□□ 1.14
SMIM3-201ENST00000526627 ERVK-9P63128 1117 aa22.19■■□□□ 1.14
SMIM3-201ENST00000526627 NT5DC3Q86UY8 548 aa22.19■■□□□ 1.14
SMIM3-201ENST00000526627 FAM160B2Q86V87 743 aa22.19■■□□□ 1.14
SMIM3-201ENST00000526627 MXRA8Q9BRK3 442 aa22.19■■□□□ 1.14
SMIM3-201ENST00000526627 INTS2Q9H0H0 1204 aaKnown RBP22.19■■□□□ 1.14
SMIM3-201ENST00000526627 SUCLA2Q9P2R7 463 aaPredicted RBP22.19■■□□□ 1.14
SMIM3-201ENST00000526627 HIP1RO75146 1068 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 PPFIA4O75335 1185 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 ECHS1P30084 290 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 IRAK1P51617 712 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 GUCY2FP51841 1108 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 PPP2R5AQ15172 486 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 DLGAP5Q15398 846 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 SLC9A9Q8IVB4 645 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 GLYCTKQ8IVS8 523 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 RASGEF1CQ8N431 466 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 RRP15Q9Y3B9 282 aaKnown RBP22.18■■□□□ 1.14
SMIM3-201ENST00000526627 NOC2LQ9Y3T9 749 aaKnown RBP22.18■■□□□ 1.14
SMIM3-201ENST00000526627 ZNF233A6NK53 670 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 RAD17O75943 681 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 SAMD1Q6SPF0 538 aaPredicted RBP22.18■■□□□ 1.14
SMIM3-201ENST00000526627 STXBP4Q6ZWJ1 553 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 PEX26Q7Z412 305 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 CALR3Q96L12 384 aaKnown RBP22.18■■□□□ 1.14
SMIM3-201ENST00000526627 RIT2Q99578 217 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.18■■□□□ 1.141e-8■■■■■ 51.9
SMIM3-201ENST00000526627 COL20A1Q9P218 1284 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 FRMD4BQ9Y2L6 1034 aa22.18■■□□□ 1.14
SMIM3-201ENST00000526627 COL4A5P29400 1685 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 NCANO14594 1321 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 HSD17B4P51659 736 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 MIGA2Q7L4E1 593 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 LMO3Q8TAP4 145 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 WHAMMQ8TF30 809 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 HES6Q96HZ4 224 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 AP1M1Q9BXS5 423 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 TMEM39BQ9GZU3 492 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 FEM1BQ9UK73 627 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 GRIN2DO15399 1336 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 IGSF9BQ9UPX0 1349 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 ARHGEF35A5YM69 484 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 PGRMC1O00264 195 aaKnown RBP22.17■■□□□ 1.14
SMIM3-201ENST00000526627 TBC1D12O60347 775 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 KRT14P02533 472 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 LMBR1Q8WVP7 490 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 RUFY1Q96T51 708 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 ISCUQ9H1K1 167 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 OSGEPQ9NPF4 335 aa22.17■■□□□ 1.14
SMIM3-201ENST00000526627 LOXHD1Q8IVV2 1947 aa22.16■■□□□ 1.14
SMIM3-201ENST00000526627 ZNF536O15090 1300 aa22.16■■□□□ 1.14
SMIM3-201ENST00000526627 RPTORQ8N122 1335 aa22.16■■□□□ 1.14
SMIM3-201ENST00000526627 DDX39AO00148 427 aaKnown RBP22.16■■□□□ 1.14
SMIM3-201ENST00000526627 MYO1CO00159 1063 aa22.16■■□□□ 1.14
SMIM3-201ENST00000526627 LMNB1P20700 586 aa22.16■■□□□ 1.14
SMIM3-201ENST00000526627 CAP2P40123 477 aa22.16■■□□□ 1.14
SMIM3-201ENST00000526627 PTGER2P43116 358 aa22.16■■□□□ 1.14
SMIM3-201ENST00000526627 CFAP58Q5T655 872 aa22.16■■□□□ 1.14
SMIM3-201ENST00000526627 CD302Q8IX05 232 aa22.16■■□□□ 1.14
SMIM3-201ENST00000526627 EIF1ADQ8N9N8 165 aaKnown RBP22.16■■□□□ 1.14
SMIM3-201ENST00000526627 AGBL1Q96MI9 1066 aa22.16■■□□□ 1.14
SMIM3-201ENST00000526627 TAF1DQ9H5J8 278 aaPredicted RBP22.16■■□□□ 1.14
SMIM3-201ENST00000526627 APEX2Q9UBZ4 518 aa22.16■■□□□ 1.14
SMIM3-201ENST00000526627 ZBTB12Q9Y330 459 aaPredicted RBP22.16■■□□□ 1.14
SMIM3-201ENST00000526627 TMCO5BA8MYB1 307 aa22.15■■□□□ 1.14
SMIM3-201ENST00000526627 SKOR1P84550 965 aa22.15■■□□□ 1.14
SMIM3-201ENST00000526627 MYL7Q01449 175 aa22.15■■□□□ 1.14
SMIM3-201ENST00000526627 BFSP1Q12934 665 aa22.15■■□□□ 1.14
SMIM3-201ENST00000526627 IL31RAQ8NI17 732 aa22.15■■□□□ 1.14
SMIM3-201ENST00000526627 CAPS2Q9BXY5 557 aa22.15■■□□□ 1.14
SMIM3-201ENST00000526627 PGAP2Q9UHJ9 254 aa22.15■■□□□ 1.14
SMIM3-201ENST00000526627 DHX15O43143 795 aaKnown RBP22.15■■□□□ 1.14
SMIM3-201ENST00000526627 TMEM253P0C7T8 217 aa22.15■■□□□ 1.14
SMIM3-201ENST00000526627 ITGA4P13612 1032 aa22.15■■□□□ 1.14
SMIM3-201ENST00000526627 HSPA9P38646 679 aaKnown RBP22.15■■□□□ 1.14
SMIM3-201ENST00000526627 PPATQ06203 517 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms