RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 MNTQ99583 582 aa4.46□□□□□ -1.7
ECHDC1-219ENST00000526299 ADARB2Q9NS39 739 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-219ENST00000526299 ASB1Q9Y576 335 aa4.46□□□□□ -1.7
ECHDC1-219ENST00000526299 TRBV23-1A0A0A0MS06 115 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 ZAR1LA6NP61 321 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 GOLGA8BA8MQT2 603 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 GOLGA6L22H0YM25 854 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 H2AFYO75367 372 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 C6orf222P0C671 652 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 ZNF37AP17032 561 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 NAT1P18440 290 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 SMAD3P84022 425 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 MAP3K12Q12852 859 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 PTPAQ15257 358 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 LY6G5CQ5SRR4 150 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 FKBP15Q5T1M5 1219 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 C1QL3Q5VWW1 255 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 SYCE2Q6PIF2 218 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 SPATC1Q76KD6 591 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 MB21D1Q8N884 522 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 CALML6Q8TD86 181 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 ATXN2LQ8WWM7 1075 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 GCDHQ92947 438 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 TCF25Q9BQ70 676 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 KCNH7Q9NS40 1196 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 FZD1Q9UP38 647 aa4.45□□□□□ -1.7
ECHDC1-219ENST00000526299 GRXCR1A8MXD5 290 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 GOLGA6L6A8MZA4 724 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 MAFO75444 373 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 CRTAMO95727 393 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 ABHD16AO95870 558 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 ITGB1P05556 798 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 SESN2P58004 480 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 SUMO1P63165 101 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 TCIRG1Q13488 830 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 RAB33AQ14088 237 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 TMEM132BQ14DG7 1078 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 COLEC12Q5KU26 742 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 FOXB2Q5VYV0 432 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 KCNV1Q6PIU1 500 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 HTR3DQ70Z44 454 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 ADGRG3Q86Y34 549 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 ERCC4Q92889 916 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 TINF2Q9BSI4 451 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 SYNPO2LQ9H987 977 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 IL23AQ9NPF7 189 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 SAE1Q9UBE0 346 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 PFDN2Q9UHV9 154 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 DENND2AQ9ULE3 1009 aa4.44□□□□□ -1.7
ECHDC1-219ENST00000526299 COL4A3Q01955 1670 aa4.43□□□□□ -1.7
ECHDC1-219ENST00000526299 ANTXR2P58335 489 aa4.43□□□□□ -1.7
ECHDC1-219ENST00000526299 GABREP78334 506 aa4.43□□□□□ -1.7
ECHDC1-219ENST00000526299 HECTD2Q5U5R9 776 aa4.43□□□□□ -1.7
ECHDC1-219ENST00000526299 OLFML1Q6UWY5 402 aa4.43□□□□□ -1.7
ECHDC1-219ENST00000526299 ZBTB38Q8NAP3 1195 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-219ENST00000526299 THAP3Q8WTV1 239 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-219ENST00000526299 GFM2Q969S9 779 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-219ENST00000526299 ZNF669Q96BR6 464 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-219ENST00000526299 TRIM55Q9BYV6 548 aa4.43□□□□□ -1.7
ECHDC1-219ENST00000526299 KIAA0355O15063 1070 aa4.42□□□□□ -1.7
ECHDC1-219ENST00000526299 ADCY3O60266 1144 aa4.42□□□□□ -1.7
ECHDC1-219ENST00000526299 RASGRP1O95267 797 aa4.42□□□□□ -1.7
ECHDC1-219ENST00000526299 SDHAP31040 664 aa4.42□□□□□ -1.7
ECHDC1-219ENST00000526299 ALDH6A1Q02252 535 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-219ENST00000526299 CATSPEREQ5SY80 951 aa4.42□□□□□ -1.7
ECHDC1-219ENST00000526299 STRIP1Q5VSL9 837 aa4.42□□□□□ -1.7
ECHDC1-219ENST00000526299 LRRC55Q6ZSA7 311 aa4.42□□□□□ -1.7
ECHDC1-219ENST00000526299 BEND2Q8NDZ0 799 aa4.42□□□□□ -1.7
ECHDC1-219ENST00000526299 DLG3Q92796 817 aa4.42□□□□□ -1.7
ECHDC1-219ENST00000526299 RCAN3Q9UKA8 241 aa4.42□□□□□ -1.7
ECHDC1-219ENST00000526299 B3GALT1Q9Y5Z6 326 aa4.42□□□□□ -1.7
ECHDC1-219ENST00000526299 HS3ST4Q9Y661 456 aa4.42□□□□□ -1.7
ECHDC1-219ENST00000526299 PDPK1O15530 556 aa4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 B3GALT2O43825 422 aa4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 MFAP3LO75121 409 aa4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 ZFP36P26651 326 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 CLK3P49761 638 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 KRTAP10-9P60411 292 aa4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 SSRP1Q08945 709 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 NBPF6Q5VWK0 638 aa4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 RTN4RL1Q86UN2 441 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 CXorf67Q86X51 503 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 PLA2G15Q8NCC3 412 aa4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 MDGA1Q8NFP4 955 aa4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 OR5AN1Q8NGI8 311 aa4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 FOXRED1Q96CU9 486 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 NBPF4Q96M43 638 aa4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 ZNF512Q96ME7 567 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 DHRS4Q9BTZ2 278 aa4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 TOR3AQ9H497 397 aa4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 SORCS3Q9UPU3 1222 aa4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 COQ6Q9Y2Z9 468 aa4.41□□□□□ -1.7
ECHDC1-219ENST00000526299 CCDC85CA6NKD9 419 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 KRTAP29-1A8MX34 341 aaPredicted RBP4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 TOX4O94842 621 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 APPP05067 770 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 FAM153BP0C7A2 387 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 TCF3P15923 654 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 CD38P28907 300 aa4.4□□□□□ -1.71
ECHDC1-219ENST00000526299 RGS3P49796 1198 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms