RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 AKT3Q9Y243 479 aa23.06■■□□□ 1.28
CD44-222ENST00000526025 CDY2AQ9Y6F7 541 aa23.06■■□□□ 1.28
CD44-222ENST00000526025 GPR32O75388 356 aa23.05■■□□□ 1.28
CD44-222ENST00000526025 GUCY2CP25092 1073 aa23.05■■□□□ 1.28
CD44-222ENST00000526025 ARL2P36404 184 aa23.05■■□□□ 1.28
CD44-222ENST00000526025 STAT6P42226 847 aa23.05■■□□□ 1.28
CD44-222ENST00000526025 CRYBB1P53674 252 aaPredicted RBP23.05■■□□□ 1.28
CD44-222ENST00000526025 CCL23P55773 120 aa23.05■■□□□ 1.28
CD44-222ENST00000526025 DRP2Q13474 957 aa23.05■■□□□ 1.28
CD44-222ENST00000526025 RINT1Q6NUQ1 792 aa23.05■■□□□ 1.28
CD44-222ENST00000526025 C1orf186Q6ZWK4 172 aa23.05■■□□□ 1.28
CD44-222ENST00000526025 RPUSD2Q8IZ73 545 aaKnown RBP23.05■■□□□ 1.28
CD44-222ENST00000526025 TMEM87AQ8NBN3 555 aa23.05■■□□□ 1.28
CD44-222ENST00000526025 MAGEF1Q9HAY2 307 aa23.05■■□□□ 1.28
CD44-222ENST00000526025 GDPD2Q9HCC8 539 aa23.05■■□□□ 1.28
CD44-222ENST00000526025 A0A087X0B3 334 aa23.04■■□□□ 1.28
CD44-222ENST00000526025 CTSHP09668 335 aa23.04■■□□□ 1.28
CD44-222ENST00000526025 GPC3P51654 580 aa23.04■■□□□ 1.28
CD44-222ENST00000526025 POU5F1BQ06416 359 aa23.04■■□□□ 1.28
CD44-222ENST00000526025 MBTPS1Q14703 1052 aa23.04■■□□□ 1.28
CD44-222ENST00000526025 E2F4Q16254 413 aa23.04■■□□□ 1.28
CD44-222ENST00000526025 IQUBQ8NA54 791 aa23.04■■□□□ 1.28
CD44-222ENST00000526025 KIFAP3Q92845 792 aa23.04■■□□□ 1.28
CD44-222ENST00000526025 TMEM143Q96AN5 459 aa23.04■■□□□ 1.28
CD44-222ENST00000526025 GDF15Q99988 308 aa23.04■■□□□ 1.28
CD44-222ENST00000526025 ADAMTS10Q9H324 1103 aa23.04■■□□□ 1.28
CD44-222ENST00000526025 IL23AQ9NPF7 189 aa23.04■■□□□ 1.28
CD44-222ENST00000526025 HPSEQ9Y251 543 aa23.04■■□□□ 1.28
CD44-222ENST00000526025 COL4A3BPQ9Y5P4 624 aa23.04■■□□□ 1.28
CD44-222ENST00000526025 VTNP04004 478 aa23.03■■□□□ 1.28
CD44-222ENST00000526025 CSF2RAP15509 400 aa23.03■■□□□ 1.28
CD44-222ENST00000526025 MAGEA10P43363 369 aaPredicted RBP23.03■■□□□ 1.28
CD44-222ENST00000526025 FBXO47Q5MNV8 452 aa23.03■■□□□ 1.28
CD44-222ENST00000526025 PRPF31Q8WWY3 499 aaKnown RBP23.03■■□□□ 1.28
CD44-222ENST00000526025 SCLYQ96I15 445 aa23.03■■□□□ 1.28
CD44-222ENST00000526025 RUSC1Q9BVN2 902 aa23.03■■□□□ 1.28
CD44-222ENST00000526025 USP25Q9UHP3 1055 aa23.03■■□□□ 1.28
CD44-222ENST00000526025 KCNH3Q9ULD8 1083 aa23.03■■□□□ 1.28
CD44-222ENST00000526025 NBNO60934 754 aa23.02■■□□□ 1.28
CD44-222ENST00000526025 BMP8BP34820 402 aa23.02■■□□□ 1.28
CD44-222ENST00000526025 NLRP11P59045 1033 aaKnown RBP23.02■■□□□ 1.28
CD44-222ENST00000526025 LAMTOR4Q0VGL1 99 aa23.02■■□□□ 1.28
CD44-222ENST00000526025 MCM6Q14566 821 aa23.02■■□□□ 1.28
CD44-222ENST00000526025 GPNMBQ14956 572 aa23.02■■□□□ 1.28
CD44-222ENST00000526025 RHPN2Q8IUC4 686 aa23.02■■□□□ 1.28
CD44-222ENST00000526025 MRPS27Q92552 414 aaKnown RBP23.02■■□□□ 1.28
CD44-222ENST00000526025 DRC1Q96MC2 740 aa23.02■■□□□ 1.28
CD44-222ENST00000526025 NFKBIZQ9BYH8 718 aa23.02■■□□□ 1.28
CD44-222ENST00000526025 POLR3FQ9H1D9 316 aaPredicted RBP23.02■■□□□ 1.28
CD44-222ENST00000526025 C17orf75Q9HAS0 396 aa23.02■■□□□ 1.28
CD44-222ENST00000526025 MICAL3Q7RTP6 2002 aa23.01■■□□□ 1.27
CD44-222ENST00000526025 SSBP05455 408 aaKnown RBP eCLIP23.01■■□□□ 1.27
CD44-222ENST00000526025 PFKFB1P16118 471 aa23.01■■□□□ 1.27
CD44-222ENST00000526025 MDM2Q00987 491 aaPredicted RBP23.01■■□□□ 1.27
CD44-222ENST00000526025 TMEM62Q0P6H9 643 aa23.01■■□□□ 1.27
CD44-222ENST00000526025 TFDP1Q14186 410 aa23.01■■□□□ 1.27
CD44-222ENST00000526025 KIZQ2M2Z5 673 aa23.01■■□□□ 1.27
CD44-222ENST00000526025 ODR4Q5SWX8 454 aa23.01■■□□□ 1.27
CD44-222ENST00000526025 PSRC1Q6PGN9 363 aaPredicted RBP23.01■■□□□ 1.27
CD44-222ENST00000526025 TSHZ1Q6ZSZ6 1077 aa23.01■■□□□ 1.27
CD44-222ENST00000526025 SV2BQ7L1I2 683 aa23.01■■□□□ 1.27
CD44-222ENST00000526025 IFNLR1Q8IU57 520 aaPredicted RBP23.01■■□□□ 1.27
CD44-222ENST00000526025 PDILTQ8N807 584 aa23.01■■□□□ 1.27
CD44-222ENST00000526025 VWCEQ96DN2 955 aa23.01■■□□□ 1.27
CD44-222ENST00000526025 TNMDQ9H2S6 317 aa23.01■■□□□ 1.27
CD44-222ENST00000526025 BMP2KQ9NSY1 1161 aaPredicted RBP23.01■■□□□ 1.27
CD44-222ENST00000526025 KCNG1Q9UIX4 513 aa23.01■■□□□ 1.27
CD44-222ENST00000526025 ODF2LQ9ULJ1 636 aa23.01■■□□□ 1.27
CD44-222ENST00000526025 GOLGA6L4A6NEF3 574 aa23■■□□□ 1.27
CD44-222ENST00000526025 POLR2DO15514 142 aaKnown RBP23■■□□□ 1.27
CD44-222ENST00000526025 GLRA2P23416 452 aa23■■□□□ 1.27
CD44-222ENST00000526025 LPIN1Q14693 890 aa23■■□□□ 1.27
CD44-222ENST00000526025 PPP2R5AQ15172 486 aa23■■□□□ 1.27
CD44-222ENST00000526025 PLEKHG4Q58EX7 1191 aa23■■□□□ 1.27
CD44-222ENST00000526025 ARSHQ5FYA8 562 aa23■■□□□ 1.27
CD44-222ENST00000526025 FAM102BQ5T8I3 360 aa23■■□□□ 1.27
CD44-222ENST00000526025 GPBP1Q86WP2 473 aa23■■□□□ 1.27
CD44-222ENST00000526025 APBB2Q92870 758 aa23■■□□□ 1.27
CD44-222ENST00000526025 GCOM2Q9BZD3 368 aaPredicted RBP23■■□□□ 1.27
CD44-222ENST00000526025 INO80BQ9C086 356 aaPredicted RBP23■■□□□ 1.27
CD44-222ENST00000526025 LRRC27Q9C0I9 530 aa23■■□□□ 1.27
CD44-222ENST00000526025 KBTBD4Q9NVX7 518 aa23■■□□□ 1.27
CD44-222ENST00000526025 DARSP14868 501 aaKnown RBP22.99■■□□□ 1.27
CD44-222ENST00000526025 EIF4BP23588 611 aaKnown RBP22.99■■□□□ 1.27
CD44-222ENST00000526025 MAPK7Q13164 816 aa22.99■■□□□ 1.27
CD44-222ENST00000526025 PCBP1Q15365 356 aaKnown RBP eCLIP22.99■■□□□ 1.27
CD44-222ENST00000526025 PRPF38BQ5VTL8 546 aaKnown RBP22.99■■□□□ 1.27
CD44-222ENST00000526025 CNKSR3Q6P9H4 555 aa22.99■■□□□ 1.27
CD44-222ENST00000526025 FSIP1Q8NA03 581 aa22.99■■□□□ 1.27
CD44-222ENST00000526025 ASAP3Q8TDY4 903 aa22.99■■□□□ 1.27
CD44-222ENST00000526025 NLRP7Q8WX94 980 aa22.99■■□□□ 1.27
CD44-222ENST00000526025 DHX58Q96C10 678 aa22.99■■□□□ 1.27
CD44-222ENST00000526025 OSMRQ99650 979 aa22.99■■□□□ 1.27
CD44-222ENST00000526025 PANK2Q9BZ23 570 aa22.99■■□□□ 1.27
CD44-222ENST00000526025 GPRC5CQ9NQ84 441 aa22.99■■□□□ 1.27
CD44-222ENST00000526025 A0A1B0GVL5 298 aa22.98■■□□□ 1.27
CD44-222ENST00000526025 HIP1RO75146 1068 aa22.98■■□□□ 1.27
CD44-222ENST00000526025 SYKP43405 635 aa22.98■■□□□ 1.27
CD44-222ENST00000526025 NAMPTP43490 491 aa22.98■■□□□ 1.27
CD44-222ENST00000526025 CAPSQ13938 189 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms