RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 RFX1P22670 979 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 DNA2P51530 1060 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 NPEPPSP55786 919 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 MYL7Q01449 175 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 MAPK7Q13164 816 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 GJB7Q6PEY0 223 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 LEKR1Q6ZMV7 388 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 SYCE1Q8N0S2 351 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 LRRC57Q8N9N7 239 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 USP38Q8NB14 1042 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 AFAP1L1Q8TED9 768 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 CLEC4DQ8WXI8 215 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 INTS2Q9H0H0 1204 aaKnown RBP17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 IKZF4Q9H2S9 585 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 TMEM206Q9H813 350 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 GDF3Q9NR23 364 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 LARSQ9P2J5 1176 aaKnown RBP17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 DNAJC12Q9UKB3 198 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 DDX39AO00148 427 aaKnown RBP17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 DDX3XO00571 662 aaKnown RBP eCLIP17.98■□□□□ 0.472e-15■■■■■ 36.8
CCDC90B-203ENST00000525503 KCNK3O14649 394 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 EXOC3O60645 756 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 CLSTN1O94985 981 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 KRT13P13646 458 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 CAPN2P17655 700 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 HNRNPH2P55795 449 aaKnown RBP17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 EN1Q05925 392 aaPredicted RBP17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 MUM1L1Q5H9M0 696 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 ALS2CLQ60I27 953 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 PCNX4Q63HM2 1172 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 TPCN2Q8NHX9 752 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 U2AF1L4Q8WU68 220 aaKnown RBP17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 ZBTB9Q96C00 473 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 AGO4Q9HCK5 861 aaKnown RBP17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 GINM1Q9NU53 330 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 PNMA2Q9UL42 364 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 UBIAD1Q9Y5Z9 338 aa17.98■□□□□ 0.47
CCDC90B-203ENST00000525503 K7ENM7 598 aa17.97■□□□□ 0.47
CCDC90B-203ENST00000525503 EVI5O60447 810 aa17.97■□□□□ 0.47
CCDC90B-203ENST00000525503 DPEP1P16444 411 aa17.97■□□□□ 0.47
CCDC90B-203ENST00000525503 ACTN2P35609 894 aa17.97■□□□□ 0.47
CCDC90B-203ENST00000525503 PAK2Q13177 524 aa17.97■□□□□ 0.47
CCDC90B-203ENST00000525503 ZSCAN26Q16670 478 aa17.97■□□□□ 0.47
CCDC90B-203ENST00000525503 TKFCQ3LXA3 575 aa17.97■□□□□ 0.47
CCDC90B-203ENST00000525503 DAW1Q8N136 415 aa17.97■□□□□ 0.47
CCDC90B-203ENST00000525503 TMEM174Q8WUU8 243 aa17.97■□□□□ 0.47
CCDC90B-203ENST00000525503 HINFPQ9BQA5 517 aa17.97■□□□□ 0.47
CCDC90B-203ENST00000525503 TBC1D22BQ9NU19 505 aa17.97■□□□□ 0.47
CCDC90B-203ENST00000525503 COL20A1Q9P218 1284 aa17.97■□□□□ 0.47
CCDC90B-203ENST00000525503 APEX2Q9UBZ4 518 aa17.97■□□□□ 0.47
CCDC90B-203ENST00000525503 PACSIN2Q9UNF0 486 aaPredicted RBP17.97■□□□□ 0.47
CCDC90B-203ENST00000525503 MYH10P35580 1976 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 PHF20L1A8MW92 1017 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 AGPSO00116 658 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 NFIBO00712 420 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 WNT10BO00744 389 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 DHX15O43143 795 aaKnown RBP17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 OPA1O60313 960 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 HEXIM1O94992 359 aaKnown RBP17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 LYPLA2O95372 231 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 KCNA3P22001 575 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 MRPS25P82663 173 aaKnown RBP17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 BFSP1Q12934 665 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 DRAP1Q14919 205 aaPredicted RBP17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 SLC30A5Q8TAD4 765 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 VTI1AQ96AJ9 217 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 ACCSQ96QU6 501 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 KRT12Q99456 494 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 TIPINQ9BVW5 301 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 KIAA1683Q9H0B3 1180 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 CWC15Q9P013 229 aaKnown RBP17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 SMCHD1A6NHR9 2005 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 QARSP47897 775 aaKnown RBP17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 CXCL9Q07325 125 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 NBPF9Q3BBW0 867 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 CBWD6Q4V339 395 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 CBWD3Q5JTY5 395 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 CBWD5Q5RIA9 395 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 SLFN11Q7Z7L1 901 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 ACTRT1Q8TDG2 376 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 MYOZ2Q9NPC6 264 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 PKD2L1Q9P0L9 805 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 SUCLA2Q9P2R7 463 aaPredicted RBP17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 TMEM59LQ9UK28 342 aa17.96■□□□□ 0.47
CCDC90B-203ENST00000525503 LOXHD1Q8IVV2 1947 aa17.95■□□□□ 0.46
CCDC90B-203ENST00000525503 GOLGA8KD6RF30 607 aa17.95■□□□□ 0.46
CCDC90B-203ENST00000525503 HSF2BPO75031 334 aa17.95■□□□□ 0.46
CCDC90B-203ENST00000525503 RPS6KA5O75582 802 aa17.95■□□□□ 0.46
CCDC90B-203ENST00000525503 GLI1P08151 1106 aa17.95■□□□□ 0.46
CCDC90B-203ENST00000525503 TRIM49P0CI25 452 aa17.95■□□□□ 0.46
CCDC90B-203ENST00000525503 TRIM49CP0CI26 452 aa17.95■□□□□ 0.46
CCDC90B-203ENST00000525503 ALAS1P13196 640 aa17.95■□□□□ 0.46
CCDC90B-203ENST00000525503 PLS3P13797 630 aa17.95■□□□□ 0.46
CCDC90B-203ENST00000525503 SNRPFP62306 86 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-203ENST00000525503 CETN1Q12798 172 aa17.95■□□□□ 0.46
CCDC90B-203ENST00000525503 MTMR1Q13613 665 aa17.95■□□□□ 0.46
CCDC90B-203ENST00000525503 INTS8Q75QN2 995 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-203ENST00000525503 PEX26Q7Z412 305 aa17.95■□□□□ 0.46
CCDC90B-203ENST00000525503 C12orf56Q8IXR9 622 aa17.95■□□□□ 0.46
CCDC90B-203ENST00000525503 IL31RAQ8NI17 732 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms