RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 TRIP12Q14669 1992 aaPredicted RBP13.75□□□□□ -0.21
CCS-202ENST00000525435 A0A087WWV3 80 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 ABHD14A-ACY1A0A1B0GW23 586 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 E9PMD0 336 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 BAIAP3O94812 1187 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 VTNP04004 478 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 CTSHP09668 335 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 PLA2G4BP0C869 781 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 EIF4BP23588 611 aaKnown RBP13.75□□□□□ -0.21
CCS-202ENST00000525435 CMA1P23946 247 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 GPC3P51654 580 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 SLC12A3P55017 1021 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 PCBP1Q15365 356 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCS-202ENST00000525435 SPECC1Q5M775 1068 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 RRAGBQ5VZM2 374 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 CNKSR3Q6P9H4 555 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 TSHZ1Q6ZSZ6 1077 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 C1orf186Q6ZWK4 172 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 USP49Q70CQ1 688 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 ZNF365Q70YC5 407 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 KIFAP3Q92845 792 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 TMEM143Q96AN5 459 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 GCOM2Q9BZD3 368 aaPredicted RBP13.75□□□□□ -0.21
CCS-202ENST00000525435 C17orf75Q9HAS0 396 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 COL4A3BPQ9Y5P4 624 aa13.75□□□□□ -0.21
CCS-202ENST00000525435 GPR182O15218 404 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 PLCG1P19174 1290 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 GUCY2CP25092 1073 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 EPHB4P54760 987 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 TMEM62Q0P6H9 643 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 LAMTOR4Q0VGL1 99 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 DRP2Q13474 957 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 IKBKEQ14164 716 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 TFDP1Q14186 410 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 LPIN1Q14693 890 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 KARSQ15046 597 aaKnown RBP13.74□□□□□ -0.21
CCS-202ENST00000525435 KIZQ2M2Z5 673 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 RASIP1Q5U651 963 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 RESP18Q5W5W9 173 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 RINT1Q6NUQ1 792 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 SHC4Q6S5L8 630 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 KCNK18Q7Z418 384 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 SRGAP1Q7Z6B7 1085 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 DEFB128Q7Z7B8 93 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 RHPN2Q8IUC4 686 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 TDHQ8IZJ6 230 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 RAD54LQ92698 747 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 FTHL17Q9BXU8 183 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 NFKBIZQ9BYH8 718 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 IFIH1Q9BYX4 1025 aaKnown RBP13.74□□□□□ -0.21
CCS-202ENST00000525435 CUEDC2Q9H467 287 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 FAM13BQ9NYF5 915 aa13.74□□□□□ -0.21
CCS-202ENST00000525435 A0A1W2PQ27 194 aa13.73□□□□□ -0.21
CCS-202ENST00000525435 A0A1W2PQ64 194 aa13.73□□□□□ -0.21
CCS-202ENST00000525435 A0A1W2PQD8 194 aa13.73□□□□□ -0.21
CCS-202ENST00000525435 USO1O60763 962 aaKnown RBP13.73□□□□□ -0.21
CCS-202ENST00000525435 RPS6KA5O75582 802 aa13.73□□□□□ -0.21
CCS-202ENST00000525435 ACRP10323 421 aa13.73□□□□□ -0.21
CCS-202ENST00000525435 DARSP14868 501 aaKnown RBP13.73□□□□□ -0.21
CCS-202ENST00000525435 PPP2R5AQ15172 486 aa13.73□□□□□ -0.21
CCS-202ENST00000525435 CSPP1Q1MSJ5 1256 aa13.73□□□□□ -0.21
CCS-202ENST00000525435 IFNLR1Q8IU57 520 aaPredicted RBP13.73□□□□□ -0.21
CCS-202ENST00000525435 IQUBQ8NA54 791 aa13.73□□□□□ -0.21
CCS-202ENST00000525435 DBF4BQ8NFT6 615 aa13.73□□□□□ -0.21
CCS-202ENST00000525435 NLRP7Q8WX94 980 aa13.73□□□□□ -0.21
CCS-202ENST00000525435 LARP4BQ92615 738 aaKnown RBP13.73□□□□□ -0.21
CCS-202ENST00000525435 DRC1Q96MC2 740 aa13.73□□□□□ -0.21
CCS-202ENST00000525435 PLIN2Q99541 437 aa13.73□□□□□ -0.21
CCS-202ENST00000525435 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.73□□□□□ -0.217e-9■■■■□ 23
CCS-202ENST00000525435 LRRC27Q9C0I9 530 aa13.73□□□□□ -0.21
CCS-202ENST00000525435 CDHR5Q9HBB8 845 aa13.73□□□□□ -0.21
CCS-202ENST00000525435 BLOC1S4Q9NUP1 217 aa13.73□□□□□ -0.21
CCS-202ENST00000525435 WDR81Q562E7 1941 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 FAM237AA0A1B0GTK4 181 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 SRGAP2CP0DJJ0 459 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 GHRP10912 638 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 SCP2P22307 547 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 PTENP60484 403 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 SHHQ15465 462 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 FAM102BQ5T8I3 360 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 SV2BQ7L1I2 683 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 PHOSPHO2Q8TCD6 241 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 IFT74Q96LB3 600 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 SCLT1Q96NL6 688 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 OSMRQ99650 979 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 NTPCRQ9BSD7 190 aaKnown RBP13.72□□□□□ -0.21
CCS-202ENST00000525435 AGO3Q9H9G7 860 aaKnown RBP13.72□□□□□ -0.21
CCS-202ENST00000525435 MAGEF1Q9HAY2 307 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 IFT122Q9HBG6 1241 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 CHST12Q9NRB3 414 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 BMP2KQ9NSY1 1161 aaPredicted RBP13.72□□□□□ -0.21
CCS-202ENST00000525435 USP25Q9UHP3 1055 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 ODF2LQ9ULJ1 636 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 PADI3Q9ULW8 664 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 COLQQ9Y215 455 aaPredicted RBP13.72□□□□□ -0.21
CCS-202ENST00000525435 GINS2Q9Y248 185 aa13.72□□□□□ -0.21
CCS-202ENST00000525435 A0A087WZ62 844 aa13.71□□□□□ -0.21
CCS-202ENST00000525435 SSBP05455 408 aaKnown RBP eCLIP13.71□□□□□ -0.21
CCS-202ENST00000525435 SFPQP23246 707 aaKnown RBP eCLIP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms