RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 MCTP1Q6DN14 999 aa12.84□□□□□ -0.35
CTTN-209ENST00000525276 MTHFD1LQ6UB35 978 aa12.84□□□□□ -0.35
CTTN-209ENST00000525276 TRMT1LQ7Z2T5 733 aaKnown RBP12.84□□□□□ -0.35
CTTN-209ENST00000525276 DNAJB3Q8WWF6 145 aa12.84□□□□□ -0.35
CTTN-209ENST00000525276 ZBTB10Q96DT7 871 aa12.84□□□□□ -0.35
CTTN-209ENST00000525276 YME1L1Q96TA2 773 aa12.84□□□□□ -0.35
CTTN-209ENST00000525276 FAM49AQ9H0Q0 323 aaPredicted RBP12.84□□□□□ -0.35
CTTN-209ENST00000525276 KIAA1671Q9BY89 1806 aa12.83□□□□□ -0.35
CTTN-209ENST00000525276 KAT6AQ92794 2004 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 SMIM35A0A1B0GVV1 85 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 ZBTB42B2RXF5 422 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 K7ELQ4 463 aaPredicted RBP12.83□□□□□ -0.36
CTTN-209ENST00000525276 LINC01565O15544 149 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 MBTPS2O43462 519 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 DKC1O60832 514 aaKnown RBP eCLIP12.83□□□□□ -0.36
CTTN-209ENST00000525276 TXKP42681 527 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 PSMC5P62195 406 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 EPHA7Q15375 998 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 ZNF174Q15697 407 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 CLUL1Q15846 466 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 CSPP1Q1MSJ5 1256 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 XKR3Q5GH77 459 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 IER5LQ5T953 404 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 IER5Q5VY09 327 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 LARP1BQ659C4 914 aaKnown RBP12.83□□□□□ -0.36
CTTN-209ENST00000525276 NCAPH2Q6IBW4 605 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 PRSS33Q8NF86 280 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 SEPT8Q92599 483 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 CLP1Q92989 425 aaKnown RBP12.83□□□□□ -0.36
CTTN-209ENST00000525276 SNX21Q969T3 373 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 MTMR9Q96QG7 549 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 TTC12Q9H892 705 aaPredicted RBP12.83□□□□□ -0.36
CTTN-209ENST00000525276 PCDHA12Q9UN75 941 aa12.83□□□□□ -0.36
CTTN-209ENST00000525276 KMT2EQ8IZD2 1858 aa12.82□□□□□ -0.36
CTTN-209ENST00000525276 M0QZ92 97 aa12.82□□□□□ -0.36
CTTN-209ENST00000525276 MAGEB2O15479 319 aa12.82□□□□□ -0.36
CTTN-209ENST00000525276 C22orf31O95567 290 aa12.82□□□□□ -0.36
CTTN-209ENST00000525276 CHRNA1P02708 482 aa12.82□□□□□ -0.36
CTTN-209ENST00000525276 P4HBP07237 508 aaKnown RBP12.82□□□□□ -0.36
CTTN-209ENST00000525276 OR52Z1P0C646 297 aa12.82□□□□□ -0.36
CTTN-209ENST00000525276 PDCP20941 246 aa12.82□□□□□ -0.36
CTTN-209ENST00000525276 QARSP47897 775 aaKnown RBP12.82□□□□□ -0.36
CTTN-209ENST00000525276 MRPS6P82932 125 aaKnown RBP12.82□□□□□ -0.36
CTTN-209ENST00000525276 SPIRE1Q08AE8 756 aa12.82□□□□□ -0.36
CTTN-209ENST00000525276 RNF135Q8IUD6 432 aa12.82□□□□□ -0.36
CTTN-209ENST00000525276 NME8Q8N427 588 aa12.82□□□□□ -0.36
CTTN-209ENST00000525276 INTS4Q96HW7 963 aaKnown RBP12.82□□□□□ -0.36
CTTN-209ENST00000525276 IFIH1Q9BYX4 1025 aaKnown RBP12.82□□□□□ -0.36
CTTN-209ENST00000525276 TMEM60Q9H2L4 133 aa12.82□□□□□ -0.36
CTTN-209ENST00000525276 SEPT9Q9UHD8 586 aaPredicted RBP12.82□□□□□ -0.36
CTTN-209ENST00000525276 CDY2AQ9Y6F7 541 aa12.82□□□□□ -0.36
CTTN-209ENST00000525276 DDX11L8A8MPP1 907 aa12.81□□□□□ -0.36
CTTN-209ENST00000525276 DNAJB1P25685 340 aa12.81□□□□□ -0.36
CTTN-209ENST00000525276 CTNNB1P35222 781 aa12.81□□□□□ -0.36
CTTN-209ENST00000525276 BMPR1AP36894 532 aa12.81□□□□□ -0.36
CTTN-209ENST00000525276 MGAT3Q09327 533 aa12.81□□□□□ -0.36
CTTN-209ENST00000525276 EP400NLQ6ZTU2 488 aa12.81□□□□□ -0.36
CTTN-209ENST00000525276 HSCBQ8IWL3 235 aa12.81□□□□□ -0.36
CTTN-209ENST00000525276 CRIPAKQ8N1N5 446 aa12.81□□□□□ -0.36
CTTN-209ENST00000525276 METTL13Q8N6R0 699 aa12.81□□□□□ -0.36
CTTN-209ENST00000525276 LINC01599Q8WXQ3 324 aa12.81□□□□□ -0.36
CTTN-209ENST00000525276 ZNF689Q96CS4 500 aaPredicted RBP12.81□□□□□ -0.36
CTTN-209ENST00000525276 MSLNLQ96KJ4 702 aa12.81□□□□□ -0.36
CTTN-209ENST00000525276 SNX27Q96L92 541 aa12.81□□□□□ -0.36
CTTN-209ENST00000525276 NIFKQ9BYG3 293 aaKnown RBP12.81□□□□□ -0.36
CTTN-209ENST00000525276 TRPV2Q9Y5S1 764 aa12.81□□□□□ -0.36
CTTN-209ENST00000525276 MYH9P35579 1960 aaKnown RBP12.8□□□□□ -0.36
CTTN-209ENST00000525276 STBD1O95210 358 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 GHRP10912 638 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 TMOD1P28289 359 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 TOB1P50616 345 aaPredicted RBP12.8□□□□□ -0.36
CTTN-209ENST00000525276 TBC1D8BQ0IIM8 1120 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 TMEM62Q0P6H9 643 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 SMAD4Q13485 552 aaKnown RBP12.8□□□□□ -0.36
CTTN-209ENST00000525276 NBR1Q14596 966 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 TARBP2Q15633 366 aaKnown RBP12.8□□□□□ -0.36
CTTN-209ENST00000525276 MTERF2Q49AM1 385 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 RILPL1Q5EBL4 403 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 C4orf19Q8IY42 314 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 KIAA0319LQ8IZA0 1049 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 DYDC2Q96IM9 177 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 MAP7D2Q96T17 732 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 EIF2AK1Q9BQI3 630 aaKnown RBP12.8□□□□□ -0.36
CTTN-209ENST00000525276 LXNQ9BS40 222 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 CELF4Q9BZC1 486 aaKnown RBP12.8□□□□□ -0.36
CTTN-209ENST00000525276 ZSWIM4Q9H7M6 989 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 RGL1Q9NZL6 768 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 CLEC1BQ9P126 229 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 ADGRA3Q8IWK6 1321 aa12.8□□□□□ -0.36
CTTN-209ENST00000525276 RIF1Q5UIP0 2472 aaKnown RBP12.79□□□□□ -0.36
CTTN-209ENST00000525276 VPS37CA5D8V6 355 aaPredicted RBP12.79□□□□□ -0.36
CTTN-209ENST00000525276 NCK2O43639 380 aa12.79□□□□□ -0.36
CTTN-209ENST00000525276 EYA4O95677 639 aa12.79□□□□□ -0.36
CTTN-209ENST00000525276 RB1P06400 928 aa12.79□□□□□ -0.36
CTTN-209ENST00000525276 CYP4A11Q02928 519 aa12.79□□□□□ -0.36
CTTN-209ENST00000525276 TCF15Q12870 199 aa12.79□□□□□ -0.36
CTTN-209ENST00000525276 ADAM15Q13444 863 aa12.79□□□□□ -0.36
CTTN-209ENST00000525276 CTTNQ14247 550 aaKnown RBP12.79□□□□□ -0.36
CTTN-209ENST00000525276 LPIN1Q14693 890 aa12.79□□□□□ -0.36
CTTN-209ENST00000525276 TMEM266Q2M3C6 531 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms