RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 TRIM8Q9BZR9 551 aa6.03□□□□□ -1.44
CD44-215ENST00000525241 PUS7LQ9H0K6 701 aaKnown RBP6.03□□□□□ -1.44
CD44-215ENST00000525241 DUSP10Q9Y6W6 482 aa6.03□□□□□ -1.44
CD44-215ENST00000525241 MYPNQ86TC9 1320 aa6.02□□□□□ -1.45
CD44-215ENST00000525241 ADAMTS20P59510 1910 aa6.02□□□□□ -1.45
CD44-215ENST00000525241 K7ESF4 209 aa6.02□□□□□ -1.45
CD44-215ENST00000525241 OPHN1O60890 802 aa6.02□□□□□ -1.45
CD44-215ENST00000525241 CLEC2LP0C7M8 214 aa6.02□□□□□ -1.45
CD44-215ENST00000525241 NCLP19338 710 aaKnown RBP6.02□□□□□ -1.45
CD44-215ENST00000525241 STAT5BP51692 787 aa6.02□□□□□ -1.45
CD44-215ENST00000525241 ERVK-21P61565 698 aa6.02□□□□□ -1.45
CD44-215ENST00000525241 USP10Q14694 798 aaKnown RBP6.02□□□□□ -1.45
CD44-215ENST00000525241 LYSMD2Q8IV50 215 aa6.02□□□□□ -1.45
CD44-215ENST00000525241 RPUSD2Q8IZ73 545 aaKnown RBP6.02□□□□□ -1.45
CD44-215ENST00000525241 LMBR1Q8WVP7 490 aa6.02□□□□□ -1.45
CD44-215ENST00000525241 FERMT2Q96AC1 680 aa6.02□□□□□ -1.45
CD44-215ENST00000525241 AHCYL2Q96HN2 611 aaKnown RBP6.02□□□□□ -1.45
CD44-215ENST00000525241 WNT8AQ9H1J5 351 aa6.02□□□□□ -1.45
CD44-215ENST00000525241 PRDM12Q9H4Q4 367 aa6.02□□□□□ -1.45
CD44-215ENST00000525241 USP40Q9NVE5 1235 aa6.02□□□□□ -1.45
CD44-215ENST00000525241 C14orf119Q9NWQ9 140 aa6.02□□□□□ -1.45
CD44-215ENST00000525241 KCNG1Q9UIX4 513 aa6.02□□□□□ -1.45
CD44-215ENST00000525241 NUMBLQ9Y6R0 609 aa6.02□□□□□ -1.45
CD44-215ENST00000525241 PCDH8O95206 1070 aa6.01□□□□□ -1.45
CD44-215ENST00000525241 GUCY2FP51841 1108 aa6.01□□□□□ -1.45
CD44-215ENST00000525241 PCOLCEQ15113 449 aa6.01□□□□□ -1.45
CD44-215ENST00000525241 CT83Q5H943 113 aa6.01□□□□□ -1.45
CD44-215ENST00000525241 BORAQ6PGQ7 559 aa6.01□□□□□ -1.45
CD44-215ENST00000525241 FRMD5Q7Z6J6 570 aa6.01□□□□□ -1.45
CD44-215ENST00000525241 RALYLQ86SE5 291 aaKnown RBP6.01□□□□□ -1.45
CD44-215ENST00000525241 LGI4Q8N135 537 aa6.01□□□□□ -1.45
CD44-215ENST00000525241 CNTD1Q8N815 330 aa6.01□□□□□ -1.45
CD44-215ENST00000525241 NKD2Q969F2 451 aaPredicted RBP6.01□□□□□ -1.45
CD44-215ENST00000525241 SAE1Q9UBE0 346 aaPredicted RBP6.01□□□□□ -1.45
CD44-215ENST00000525241 A0A0A6YYK5 440 aaPredicted RBP6□□□□□ -1.45
CD44-215ENST00000525241 ST20-MTHFSA0A0A6YYL1 179 aa6□□□□□ -1.45
CD44-215ENST00000525241 GOLGA8AA7E2F4 631 aa6□□□□□ -1.45
CD44-215ENST00000525241 GOLGA8BA8MQT2 603 aa6□□□□□ -1.45
CD44-215ENST00000525241 ALG1L2C9J202 215 aa6□□□□□ -1.45
CD44-215ENST00000525241 MAFGO15525 162 aa6□□□□□ -1.45
CD44-215ENST00000525241 B4GALT4O60513 344 aa6□□□□□ -1.45
CD44-215ENST00000525241 INHBBP09529 407 aa6□□□□□ -1.45
CD44-215ENST00000525241 RRADP55042 308 aa6□□□□□ -1.45
CD44-215ENST00000525241 SCAND1P57086 179 aa6□□□□□ -1.45
CD44-215ENST00000525241 MTMR1Q13613 665 aa6□□□□□ -1.45
CD44-215ENST00000525241 TRIM25Q14258 630 aaKnown RBP6□□□□□ -1.45
CD44-215ENST00000525241 FAM50AQ14320 339 aaKnown RBP6□□□□□ -1.45
CD44-215ENST00000525241 FSCN1Q16658 493 aaKnown RBP6□□□□□ -1.45
CD44-215ENST00000525241 PITRM1Q5JRX3 1037 aa6□□□□□ -1.45
CD44-215ENST00000525241 CCDC62Q6P9F0 684 aa6□□□□□ -1.45
CD44-215ENST00000525241 SLC41A1Q8IVJ1 513 aa6□□□□□ -1.45
CD44-215ENST00000525241 DYDC2Q96IM9 177 aa6□□□□□ -1.45
CD44-215ENST00000525241 ACAP3Q96P50 834 aa6□□□□□ -1.45
CD44-215ENST00000525241 ORAI2Q96SN7 254 aa6□□□□□ -1.45
CD44-215ENST00000525241 NOL10Q9BSC4 688 aaKnown RBP6□□□□□ -1.45
CD44-215ENST00000525241 SOX7Q9BT81 388 aa6□□□□□ -1.45
CD44-215ENST00000525241 MENTQ9BUN1 341 aa6□□□□□ -1.45
CD44-215ENST00000525241 KIAA1683Q9H0B3 1180 aa6□□□□□ -1.45
CD44-215ENST00000525241 INVSQ9Y283 1065 aa6□□□□□ -1.45
CD44-215ENST00000525241 VWA7Q9Y334 891 aa6□□□□□ -1.45
CD44-215ENST00000525241 SLC4A7Q9Y6M7 1214 aa6□□□□□ -1.45
CD44-215ENST00000525241 WASHC2CQ9Y4E1 1318 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 hCG_2014768A0A024R1R8 64 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 KATNA1O75449 491 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 CELA3BP08861 270 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 HOXA5P20719 270 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 ENPP1P22413 925 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 CNR2P34972 360 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 GPR3P46089 330 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 MRE11P49959 708 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 TBR1Q16650 682 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 INAVAQ3KP66 663 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 ZFYVE27Q5T4F4 411 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 TTLL10Q6ZVT0 673 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 RTKN2Q8IZC4 609 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 CBARPQ8N350 705 aaPredicted RBP5.99□□□□□ -1.45
CD44-215ENST00000525241 PPP1R14CQ8TAE6 165 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 EAF2Q96CJ1 260 aaPredicted RBP5.99□□□□□ -1.45
CD44-215ENST00000525241 ADAM7Q9H2U9 754 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 POLR3BQ9NW08 1133 aaPredicted RBP5.99□□□□□ -1.45
CD44-215ENST00000525241 PRSS50Q9UI38 385 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 DNAI1Q9UI46 699 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 PCDHB6Q9Y5E3 794 aa5.99□□□□□ -1.45
CD44-215ENST00000525241 A0A0G2JLL6 359 aaPredicted RBP5.98□□□□□ -1.45
CD44-215ENST00000525241 PRICKLE3O43900 615 aaPredicted RBP5.98□□□□□ -1.45
CD44-215ENST00000525241 CNOT4O95628 575 aaKnown RBP5.98□□□□□ -1.45
CD44-215ENST00000525241 LPLP06858 475 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 MEOX1P50221 254 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 ANAPC15P60006 121 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 IGBP1P78318 339 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 UGT8Q16880 541 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 FBLN7Q53RD9 439 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 ZMAT1Q5H9K5 638 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 AGBL4Q5VU57 503 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 KLHDC10Q6PID8 442 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 FERMT3Q86UX7 667 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 CDYL2Q8N8U2 506 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 TGFBRAP1Q8WUH2 860 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 GAB3Q8WWW8 586 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms