RNA–Protein interactions for RNA: ENST00000524784.1

PACS1-202, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-202ENST00000524784 ALCAMQ13740 583 aa11.69□□□□□ -0.54
PACS1-202ENST00000524784 MFSD10Q14728 455 aa11.69□□□□□ -0.54
PACS1-202ENST00000524784 PPP2R5AQ15172 486 aa11.69□□□□□ -0.54
PACS1-202ENST00000524784 SPATA1Q5VX52 437 aa11.69□□□□□ -0.54
PACS1-202ENST00000524784 IER5Q5VY09 327 aa11.69□□□□□ -0.54
PACS1-202ENST00000524784 ZNF720Q7Z2F6 126 aa11.69□□□□□ -0.54
PACS1-202ENST00000524784 DAW1Q8N136 415 aa11.69□□□□□ -0.54
PACS1-202ENST00000524784 P2RX5Q93086 422 aa11.69□□□□□ -0.54
PACS1-202ENST00000524784 TSG101Q99816 390 aa11.69□□□□□ -0.54
PACS1-202ENST00000524784 POLR3FQ9H1D9 316 aaPredicted RBP11.69□□□□□ -0.54
PACS1-202ENST00000524784 GPRC5CQ9NQ84 441 aa11.69□□□□□ -0.54
PACS1-202ENST00000524784 XPNPEP1Q9NQW7 623 aa11.69□□□□□ -0.54
PACS1-202ENST00000524784 PTPN22Q9Y2R2 807 aa11.69□□□□□ -0.54
PACS1-202ENST00000524784 MYH9P35579 1960 aaKnown RBP11.68□□□□□ -0.54
PACS1-202ENST00000524784 K7ENM7 598 aa11.68□□□□□ -0.54
PACS1-202ENST00000524784 EIF3DO15371 548 aaKnown RBP eCLIP11.68□□□□□ -0.54
PACS1-202ENST00000524784 FGFR1OPO95684 399 aaKnown RBP11.68□□□□□ -0.54
PACS1-202ENST00000524784 F2P00734 622 aa11.68□□□□□ -0.54
PACS1-202ENST00000524784 KLRC1P26715 233 aa11.68□□□□□ -0.54
PACS1-202ENST00000524784 TMOD1P28289 359 aa11.68□□□□□ -0.54
PACS1-202ENST00000524784 NMT1P30419 496 aaKnown RBP11.68□□□□□ -0.54
PACS1-202ENST00000524784 ABCD1P33897 745 aa11.68□□□□□ -0.54
PACS1-202ENST00000524784 PSEN2P49810 448 aa11.68□□□□□ -0.54
PACS1-202ENST00000524784 NKX3-2P78367 333 aa11.68□□□□□ -0.54
PACS1-202ENST00000524784 PLCB2Q00722 1185 aa11.68□□□□□ -0.54
PACS1-202ENST00000524784 KIAA0753Q2KHM9 967 aa11.68□□□□□ -0.54
PACS1-202ENST00000524784 RNF180Q86T96 592 aa11.68□□□□□ -0.54
PACS1-202ENST00000524784 METTL13Q8N6R0 699 aa11.68□□□□□ -0.54
PACS1-202ENST00000524784 PCSK9Q8NBP7 692 aaKnown RBP11.68□□□□□ -0.54
PACS1-202ENST00000524784 SCFD1Q8WVM8 642 aa11.68□□□□□ -0.54
PACS1-202ENST00000524784 SPIRE2Q8WWL2 714 aa11.68□□□□□ -0.54
PACS1-202ENST00000524784 TMEM143Q96AN5 459 aa11.68□□□□□ -0.54
PACS1-202ENST00000524784 CEP89Q96ST8 783 aa11.68□□□□□ -0.54
PACS1-202ENST00000524784 MTG1Q9BT17 334 aaPredicted RBP11.68□□□□□ -0.54
PACS1-202ENST00000524784 KMT5AQ9NQR1 393 aa11.68□□□□□ -0.54
PACS1-202ENST00000524784 UBE4BO95155 1302 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 NRCAMQ92823 1304 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 SLC16A4O15374 487 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 ASAP2O43150 1006 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 PRPF6O94906 941 aaKnown RBP11.67□□□□□ -0.54
PACS1-202ENST00000524784 MYBP10242 640 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 GNAT1P11488 350 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 CDK11BP21127 795 aaKnown RBP11.67□□□□□ -0.54
PACS1-202ENST00000524784 SCP2P22307 547 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 ARL2P36404 184 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 PURAQ00577 322 aaKnown RBP11.67□□□□□ -0.54
PACS1-202ENST00000524784 TFDP1Q14186 410 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 MXD4Q14582 209 aaPredicted RBP11.67□□□□□ -0.54
PACS1-202ENST00000524784 NCAPHQ15003 741 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 GRIK4Q16099 956 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 KNOP1Q1ED39 458 aaKnown RBP11.67□□□□□ -0.54
PACS1-202ENST00000524784 CENPPQ6IPU0 288 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 EFCAB12Q6NXP0 572 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 EPM2AIP1Q7L775 607 aaPredicted RBP11.67□□□□□ -0.54
PACS1-202ENST00000524784 HAUS6Q7Z4H7 955 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 NELFCDQ8IXH7 590 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 SYCP3Q8IZU3 236 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 DEPTORQ8TB45 409 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 ZNF507Q8TCN5 953 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 NOC3LQ8WTT2 800 aaKnown RBP11.67□□□□□ -0.54
PACS1-202ENST00000524784 PSPC1Q8WXF1 523 aaKnown RBP11.67□□□□□ -0.54
PACS1-202ENST00000524784 KAT2BQ92831 832 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 NTPCRQ9BSD7 190 aaKnown RBP11.67□□□□□ -0.54
PACS1-202ENST00000524784 TMEM206Q9H813 350 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 FANCLQ9NW38 375 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 SUCLA2Q9P2R7 463 aaPredicted RBP11.67□□□□□ -0.54
PACS1-202ENST00000524784 EXOC7Q9UPT5 735 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 NFE2L3Q9Y4A8 694 aa11.67□□□□□ -0.54
PACS1-202ENST00000524784 IGKV6-21A0A0C4DH24 114 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 MYADML2A6NDP7 307 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 ZBTB42B2RXF5 422 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 HAS3O00219 553 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 CALUO43852 315 aaPredicted RBP11.66□□□□□ -0.54
PACS1-202ENST00000524784 ADAMTS4O75173 837 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 C22orf31O95567 290 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 SMIM10L2AP0DMW4 78 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 SMIM10L2BP0DMW5 78 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 CST5P28325 142 aaPredicted RBP11.66□□□□□ -0.54
PACS1-202ENST00000524784 NAMPTP43490 491 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 NPTX2P47972 431 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 CASP5P51878 434 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 SOX10P56693 466 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 IRX5P78411 483 aaPredicted RBP11.66□□□□□ -0.54
PACS1-202ENST00000524784 LRRC63Q05C16 580 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 BMT2Q1RMZ1 405 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 SLC9C1Q4G0N8 1177 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 ZC2HC1CQ53FD0 456 aaPredicted RBP11.66□□□□□ -0.54
PACS1-202ENST00000524784 ANKRD40Q6AI12 368 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 FOXR2Q6PJQ5 311 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 MTHFD1LQ6UB35 978 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 CXCL17Q6UXB2 119 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 PPP4R3CPQ6ZMV5 832 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 CSGALNACT2Q8N6G5 542 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 C7orf31Q8N865 590 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 ARRDC4Q8NCT1 418 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 GLIS3Q8NEA6 775 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 KLHDC9Q8NEP7 349 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 ANKRD20A12PQ8NF67 263 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 SH3TC2Q8TF17 1288 aa11.66□□□□□ -0.54
PACS1-202ENST00000524784 TRAPPC12Q8WVT3 735 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms