RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 KLRC4O43908 158 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 EIF3JO75822 258 aaKnown RBP7.85□□□□□ -1.15
VPS11-201ENST00000524454 TUBB4AP04350 444 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 ZNF286BP0CG31 522 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 RPA1P27694 616 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 TECP42680 631 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 TXKP42681 527 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 AFMP43652 599 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 CPT1AP50416 773 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 CDK7P50613 346 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 FXR1P51114 621 aaKnown RBP eCLIP7.85□□□□□ -1.15
VPS11-201ENST00000524454 NKX3-2P78367 333 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 MRPS9P82933 396 aaKnown RBP7.85□□□□□ -1.15
VPS11-201ENST00000524454 SP2Q02086 613 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 EHHADHQ08426 723 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 SPIRE1Q08AE8 756 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 GRB10Q13322 594 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 PPP2R5CQ13362 524 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 ITGA7Q13683 1181 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 TRIM14Q14142 442 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 PWP2Q15269 919 aaKnown RBP7.85□□□□□ -1.15
VPS11-201ENST00000524454 FAM47CQ5HY64 1035 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 UNC13DQ70J99 1090 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 VSTM4Q8IW00 320 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 FAM114A1Q8IWE2 563 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 DRC7Q8IY82 874 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 KIAA1524Q8TCG1 905 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 SNX29Q8TEQ0 813 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 RAD54LQ92698 747 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 ERCC4Q92889 916 aaPredicted RBP7.85□□□□□ -1.15
VPS11-201ENST00000524454 LRCH3Q96II8 777 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 RIT2Q99578 217 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 LBHD1Q9BQE6 289 aaPredicted RBP7.85□□□□□ -1.15
VPS11-201ENST00000524454 TRPV6Q9H1D0 765 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 THAP9Q9H5L6 903 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 SLC24A3Q9HC58 644 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 TMEM39AQ9NV64 488 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 EXOC1Q9NV70 894 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 PKD2L1Q9P0L9 805 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 DDX41Q9UJV9 622 aaKnown RBP7.85□□□□□ -1.15
VPS11-201ENST00000524454 Q9Y3F1 56 aa7.85□□□□□ -1.15
VPS11-201ENST00000524454 UMODL1Q5DID0 1318 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 FRMD3A2A2Y4 597 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 DCDC2CA8MYV0 355 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 MAFGO15525 162 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 CCP110O43303 1012 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 ZEB2O60315 1214 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 MARCH6O60337 910 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 B4GALT4O60513 344 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 STAM2O75886 525 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 FGFR1OPO95684 399 aaKnown RBP7.84□□□□□ -1.15
VPS11-201ENST00000524454 GGPS1O95749 300 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 SERPINC1P01008 464 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 GH1P01241 217 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 MMP3P08254 477 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 RAG1P15918 1043 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 UBA1P22314 1058 aaKnown RBP7.84□□□□□ -1.15
VPS11-201ENST00000524454 EPHB4P54760 987 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 UBASH3AP57075 661 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 SP4Q02446 784 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 LRRC63Q05C16 580 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 NBPF20Q3BBV1 942 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 FILIP1LQ4L180 1135 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 CEP55Q53EZ4 464 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 C9orf50Q5SZB4 431 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 C1orf53Q5VUE5 145 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 SPECC1LQ69YQ0 1117 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 ANKRD33Q7Z3H0 272 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 VSIG10LQ86VR7 867 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 LRRC8AQ8IWT6 810 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 FAM126BQ8IXS8 530 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 DHX37Q8IY37 1157 aaKnown RBP7.84□□□□□ -1.15
VPS11-201ENST00000524454 GRAMD1CQ8IYS0 662 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 GUF1Q8N442 669 aaKnown RBP7.84□□□□□ -1.15
VPS11-201ENST00000524454 SLC5A5Q92911 643 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 UIMC1Q96RL1 719 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 MTG1Q9BT17 334 aaPredicted RBP7.84□□□□□ -1.15
VPS11-201ENST00000524454 XPO4Q9C0E2 1151 aaKnown RBP7.84□□□□□ -1.15
VPS11-201ENST00000524454 TUFT1Q9NNX1 390 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 RRAGDQ9NQL2 400 aaPredicted RBP7.84□□□□□ -1.15
VPS11-201ENST00000524454 BLOC1S4Q9NUP1 217 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 TRMT13Q9NUP7 481 aaKnown RBP7.84□□□□□ -1.15
VPS11-201ENST00000524454 FANCLQ9NW38 375 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 IFNKQ9P0W0 207 aa7.84□□□□□ -1.15
VPS11-201ENST00000524454 LIMA1Q9UHB6 759 aaKnown RBP7.84□□□□□ -1.15
VPS11-201ENST00000524454 TRIP12Q14669 1992 aaPredicted RBP7.84□□□□□ -1.15
VPS11-201ENST00000524454 TANC1Q9C0D5 1861 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 A0A1W2PQC6 194 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 A6NJR5 290 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 PP2D1A8MPX8 630 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 FAM86B1E9PN63 330 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 KIF2AO00139 706 aaPredicted RBP7.83□□□□□ -1.16
VPS11-201ENST00000524454 MEIS1O00470 390 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 KIAA0355O15063 1070 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 NKRFO15226 690 aaKnown RBP eCLIP7.83□□□□□ -1.16
VPS11-201ENST00000524454 OFD1O75665 1012 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 CD4P01730 458 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 FAM86B2P0C5J1 330 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 CYP2C9P11712 490 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 SFPQP23246 707 aaKnown RBP eCLIP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms