RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 SLC4A7Q9Y6M7 1214 aa7.6□□□□□ -1.19
CPNE3-207ENST00000523588 PRSS38A1L453 326 aa7.59□□□□□ -1.19
CPNE3-207ENST00000523588 KDM1AO60341 852 aa7.59□□□□□ -1.19
CPNE3-207ENST00000523588 OPHN1O60890 802 aa7.59□□□□□ -1.19
CPNE3-207ENST00000523588 RAB11FIP3O75154 756 aa7.59□□□□□ -1.19
CPNE3-207ENST00000523588 CNOT4O95628 575 aaKnown RBP7.59□□□□□ -1.19
CPNE3-207ENST00000523588 RRADP55042 308 aa7.59□□□□□ -1.19
CPNE3-207ENST00000523588 PCOLCEQ15113 449 aa7.59□□□□□ -1.19
CPNE3-207ENST00000523588 UBXN11Q5T124 520 aa7.59□□□□□ -1.19
CPNE3-207ENST00000523588 BMP8AQ7Z5Y6 402 aa7.59□□□□□ -1.19
CPNE3-207ENST00000523588 ATL2Q8NHH9 583 aa7.59□□□□□ -1.19
CPNE3-207ENST00000523588 MYPNQ86TC9 1320 aa7.58□□□□□ -1.2
CPNE3-207ENST00000523588 PFKMP08237 780 aa7.58□□□□□ -1.2
CPNE3-207ENST00000523588 MANFP55145 182 aaKnown RBP7.58□□□□□ -1.2
CPNE3-207ENST00000523588 PPP2CBP62714 309 aa7.58□□□□□ -1.2
CPNE3-207ENST00000523588 PPP2CAP67775 309 aa7.58□□□□□ -1.2
CPNE3-207ENST00000523588 NFIXQ14938 502 aa7.58□□□□□ -1.2
CPNE3-207ENST00000523588 TBR1Q16650 682 aa7.58□□□□□ -1.2
CPNE3-207ENST00000523588 TBC1D10BQ4KMP7 808 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-207ENST00000523588 RNF219Q5W0B1 726 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-207ENST00000523588 PLEKHH3Q7Z736 793 aa7.58□□□□□ -1.2
CPNE3-207ENST00000523588 NKD2Q969F2 451 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-207ENST00000523588 ANO3Q9BYT9 981 aa7.58□□□□□ -1.2
CPNE3-207ENST00000523588 SAE1Q9UBE0 346 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-207ENST00000523588 TMPRSS11EQ9UL52 423 aa7.58□□□□□ -1.2
CPNE3-207ENST00000523588 PPP2R3BQ9Y5P8 575 aa7.58□□□□□ -1.2
CPNE3-207ENST00000523588 A0A0A6YYK5 440 aaPredicted RBP7.57□□□□□ -1.2
CPNE3-207ENST00000523588 MRE11P49959 708 aa7.57□□□□□ -1.2
CPNE3-207ENST00000523588 EPHB4P54760 987 aa7.57□□□□□ -1.2
CPNE3-207ENST00000523588 SURF1Q15526 300 aa7.57□□□□□ -1.2
CPNE3-207ENST00000523588 RNF151Q2KHN1 245 aa7.57□□□□□ -1.2
CPNE3-207ENST00000523588 ZMAT1Q5H9K5 638 aa7.57□□□□□ -1.2
CPNE3-207ENST00000523588 AGBL4Q5VU57 503 aa7.57□□□□□ -1.2
CPNE3-207ENST00000523588 SPATS2Q86XZ4 545 aaKnown RBP7.57□□□□□ -1.2
CPNE3-207ENST00000523588 RTKN2Q8IZC4 609 aa7.57□□□□□ -1.2
CPNE3-207ENST00000523588 FERMT2Q96AC1 680 aa7.57□□□□□ -1.2
CPNE3-207ENST00000523588 SOX7Q9BT81 388 aa7.57□□□□□ -1.2
CPNE3-207ENST00000523588 MCM8Q9UJA3 840 aa7.57□□□□□ -1.2
CPNE3-207ENST00000523588 VWA7Q9Y334 891 aa7.57□□□□□ -1.2
CPNE3-207ENST00000523588 LAMTOR5O43504 91 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 PRKD3O94806 890 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 PCDH8O95206 1070 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 PLATP00750 562 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 MEOX1P50221 254 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 CTSWP56202 376 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 NFYCQ13952 458 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 LCE1DQ5T752 114 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 LCE4AQ5TA78 99 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 IQSEC1Q6DN90 963 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 ARHGEF18Q6ZSZ5 1173 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 LYSMD2Q8IV50 215 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 CMIPQ8IY22 773 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 COG1Q8WTW3 980 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 DYDC2Q96IM9 177 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 PTPN18Q99952 460 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 PRDM12Q9H4Q4 367 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 PCDH12Q9NPG4 1184 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 POLR3BQ9NW08 1133 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-207ENST00000523588 COL4A3BPQ9Y5P4 624 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 NUMBLQ9Y6R0 609 aa7.56□□□□□ -1.2
CPNE3-207ENST00000523588 ANKRD62A6NC57 917 aa7.55□□□□□ -1.2
CPNE3-207ENST00000523588 MATN2O00339 956 aa7.55□□□□□ -1.2
CPNE3-207ENST00000523588 CLEC2LP0C7M8 214 aa7.55□□□□□ -1.2
CPNE3-207ENST00000523588 CDKN1CP49918 316 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-207ENST00000523588 KLHDC10Q6PID8 442 aa7.55□□□□□ -1.2
CPNE3-207ENST00000523588 USP30Q70CQ3 517 aa7.55□□□□□ -1.2
CPNE3-207ENST00000523588 SLC41A1Q8IVJ1 513 aa7.55□□□□□ -1.2
CPNE3-207ENST00000523588 CXorf38Q8TB03 319 aa7.55□□□□□ -1.2
CPNE3-207ENST00000523588 GPATCH3Q96I76 525 aa7.55□□□□□ -1.2
CPNE3-207ENST00000523588 RBM15Q96T37 977 aaKnown RBP eCLIP7.55□□□□□ -1.2
CPNE3-207ENST00000523588 NOL10Q9BSC4 688 aaKnown RBP7.55□□□□□ -1.2
CPNE3-207ENST00000523588 SSBP3Q9BWW4 388 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-207ENST00000523588 KRTAP4-7Q9BYR0 210 aa7.55□□□□□ -1.2
CPNE3-207ENST00000523588 MEGF9Q9H1U4 602 aa7.55□□□□□ -1.2
CPNE3-207ENST00000523588 OR10A2Q9H208 303 aa7.55□□□□□ -1.2
CPNE3-207ENST00000523588 SEC61A2Q9H9S3 476 aa7.55□□□□□ -1.2
CPNE3-207ENST00000523588 PPP4R1LQ9P1A2 415 aa7.55□□□□□ -1.2
CPNE3-207ENST00000523588 CTDP1Q9Y5B0 961 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-207ENST00000523588 ST20-MTHFSA0A0A6YYL1 179 aa7.54□□□□□ -1.2
CPNE3-207ENST00000523588 MAFGO15525 162 aa7.54□□□□□ -1.2
CPNE3-207ENST00000523588 ARHGAP6O43182 974 aa7.54□□□□□ -1.2
CPNE3-207ENST00000523588 CELA3BP08861 270 aa7.54□□□□□ -1.2
CPNE3-207ENST00000523588 CDK11BP21127 795 aaKnown RBP7.54□□□□□ -1.2
CPNE3-207ENST00000523588 HGFACQ04756 655 aa7.54□□□□□ -1.2
CPNE3-207ENST00000523588 ADAM15Q13444 863 aa7.54□□□□□ -1.2
CPNE3-207ENST00000523588 PITRM1Q5JRX3 1037 aa7.54□□□□□ -1.2
CPNE3-207ENST00000523588 PPP1R14CQ8TAE6 165 aa7.54□□□□□ -1.2
CPNE3-207ENST00000523588 LMBR1Q8WVP7 490 aa7.54□□□□□ -1.2
CPNE3-207ENST00000523588 CFHR4Q92496 578 aa7.54□□□□□ -1.2
CPNE3-207ENST00000523588 WDR92Q96MX6 357 aa7.54□□□□□ -1.2
CPNE3-207ENST00000523588 WNT8AQ9H1J5 351 aa7.54□□□□□ -1.2
CPNE3-207ENST00000523588 DNAI1Q9UI46 699 aa7.54□□□□□ -1.2
CPNE3-207ENST00000523588 KCNG1Q9UIX4 513 aa7.54□□□□□ -1.2
CPNE3-207ENST00000523588 PCDHB6Q9Y5E3 794 aa7.54□□□□□ -1.2
CPNE3-207ENST00000523588 ITGB3P05106 788 aa7.53□□□□□ -1.2
CPNE3-207ENST00000523588 SESN2P58004 480 aaPredicted RBP7.53□□□□□ -1.2
CPNE3-207ENST00000523588 FAPQ12884 760 aa7.53□□□□□ -1.2
CPNE3-207ENST00000523588 TRIM25Q14258 630 aaKnown RBP7.53□□□□□ -1.2
CPNE3-207ENST00000523588 FSCN1Q16658 493 aaKnown RBP7.53□□□□□ -1.2
CPNE3-207ENST00000523588 PTPROQ16827 1216 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms