RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 LRRC43Q8N309 656 aa29.35■■■□□ 2.29
PVT1-219ENST00000523427 ASIC4Q96FT7 647 aa29.35■■■□□ 2.29
PVT1-219ENST00000523427 MAGEB2O15479 319 aa29.34■■■□□ 2.29
PVT1-219ENST00000523427 PDGFBP01127 241 aaPredicted RBP29.34■■■□□ 2.29
PVT1-219ENST00000523427 FGFR4P22455 802 aa29.34■■■□□ 2.29
PVT1-219ENST00000523427 TMOD1P28289 359 aa29.34■■■□□ 2.29
PVT1-219ENST00000523427 AVPR2P30518 371 aa29.34■■■□□ 2.29
PVT1-219ENST00000523427 ECHDC2Q86YB7 292 aa29.34■■■□□ 2.29
PVT1-219ENST00000523427 RASGRP4Q8TDF6 673 aa29.34■■■□□ 2.29
PVT1-219ENST00000523427 CRYGNQ8WXF5 182 aa29.34■■■□□ 2.29
PVT1-219ENST00000523427 C6orf50Q9HD87 102 aa29.34■■■□□ 2.29
PVT1-219ENST00000523427 SPG21Q9NZD8 308 aa29.34■■■□□ 2.29
PVT1-219ENST00000523427 SETQ01105 290 aaPredicted RBP29.33■■■□□ 2.29
PVT1-219ENST00000523427 SKAP1Q86WV1 359 aa29.33■■■□□ 2.29
PVT1-219ENST00000523427 SMAP1Q8IYB5 467 aaPredicted RBP29.33■■■□□ 2.29
PVT1-219ENST00000523427 REXO1Q8N1G1 1221 aaKnown RBP29.33■■■□□ 2.29
PVT1-219ENST00000523427 ADAMTS10Q9H324 1103 aa29.33■■■□□ 2.29
PVT1-219ENST00000523427 NT5C1B-RDH14C9J2C7 533 aa29.32■■■□□ 2.28
PVT1-219ENST00000523427 CPA1P15085 419 aa29.32■■■□□ 2.28
PVT1-219ENST00000523427 EIF4BP23588 611 aaKnown RBP29.32■■■□□ 2.28
PVT1-219ENST00000523427 PPM1AP35813 382 aa29.32■■■□□ 2.28
PVT1-219ENST00000523427 METAP2P50579 478 aaKnown RBP eCLIP29.32■■■□□ 2.28
PVT1-219ENST00000523427 HELQQ8TDG4 1101 aa29.32■■■□□ 2.28
PVT1-219ENST00000523427 ATOH1Q92858 354 aaPredicted RBP29.32■■■□□ 2.28
PVT1-219ENST00000523427 CHMP2AO43633 222 aa29.31■■■□□ 2.28
PVT1-219ENST00000523427 CSDE1O75534 798 aaKnown RBP29.31■■■□□ 2.28
PVT1-219ENST00000523427 HOXB8P17481 243 aaPredicted RBP29.31■■■□□ 2.28
PVT1-219ENST00000523427 CLLU1OSQ5K130 101 aa29.31■■■□□ 2.28
PVT1-219ENST00000523427 CASP10Q92851 521 aa29.31■■■□□ 2.28
PVT1-219ENST00000523427 FAM167AQ96KS9 214 aa29.31■■■□□ 2.28
PVT1-219ENST00000523427 ZMYND12Q9H0C1 365 aa29.31■■■□□ 2.28
PVT1-219ENST00000523427 NRBP2Q9NSY0 501 aa29.31■■■□□ 2.28
PVT1-219ENST00000523427 MYH9P35579 1960 aaKnown RBP29.31■■■□□ 2.28
PVT1-219ENST00000523427 WEE2P0C1S8 567 aa29.3■■■□□ 2.28
PVT1-219ENST00000523427 SMC1AQ14683 1233 aaKnown RBP29.3■■■□□ 2.28
PVT1-219ENST00000523427 CES5AQ6NT32 575 aa29.3■■■□□ 2.28
PVT1-219ENST00000523427 KREMEN2Q8NCW0 462 aa29.3■■■□□ 2.28
PVT1-219ENST00000523427 NLRP7Q8WX94 980 aa29.3■■■□□ 2.28
PVT1-219ENST00000523427 DISC1Q9NRI5 854 aa29.3■■■□□ 2.28
PVT1-219ENST00000523427 HCFC2Q9Y5Z7 792 aa29.3■■■□□ 2.28
PVT1-219ENST00000523427 ZFHX2Q9C0A1 2572 aaPredicted RBP29.3■■■□□ 2.28
PVT1-219ENST00000523427 WDR64B1ANS9 1081 aa29.29■■■□□ 2.28
PVT1-219ENST00000523427 ZNF862O60290 1169 aa29.29■■■□□ 2.28
PVT1-219ENST00000523427 OATP04181 439 aa29.29■■■□□ 2.28
PVT1-219ENST00000523427 TPRNQ4KMQ1 711 aa29.29■■■□□ 2.28
PVT1-219ENST00000523427 MRPL43Q8N983 215 aaKnown RBP29.29■■■□□ 2.28
PVT1-219ENST00000523427 CCDC12Q8WUD4 166 aaPredicted RBP29.29■■■□□ 2.28
PVT1-219ENST00000523427 POMKQ9H5K3 350 aa29.29■■■□□ 2.28
PVT1-219ENST00000523427 NR2E1Q9Y466 385 aa29.29■■■□□ 2.28
PVT1-219ENST00000523427 C2orf71A6NGG8 1288 aa29.28■■■□□ 2.28
PVT1-219ENST00000523427 H0Y858 1186 aa29.28■■■□□ 2.28
PVT1-219ENST00000523427 GFRA3O60609 400 aa29.28■■■□□ 2.28
PVT1-219ENST00000523427 GPC3P51654 580 aa29.28■■■□□ 2.28
PVT1-219ENST00000523427 PRKCEQ02156 737 aa29.28■■■□□ 2.28
PVT1-219ENST00000523427 LONRF3Q496Y0 759 aa29.28■■■□□ 2.28
PVT1-219ENST00000523427 SLC39A11Q8N1S5 342 aa29.28■■■□□ 2.28
PVT1-219ENST00000523427 LINC01465Q8N7H1 131 aa29.28■■■□□ 2.28
PVT1-219ENST00000523427 C12orf76Q8N812 135 aaPredicted RBP29.28■■■□□ 2.28
PVT1-219ENST00000523427 TMEM87AQ8NBN3 555 aa29.28■■■□□ 2.28
PVT1-219ENST00000523427 PHKBQ93100 1093 aa29.28■■■□□ 2.28
PVT1-219ENST00000523427 RIPOR3Q96MK2 946 aa29.28■■■□□ 2.28
PVT1-219ENST00000523427 CACNA1HO95180 2353 aa29.28■■■□□ 2.28
PVT1-219ENST00000523427 CCDC196A0A1B0GTZ2 297 aa29.27■■■□□ 2.28
PVT1-219ENST00000523427 ESYT2A0FGR8 921 aa29.27■■■□□ 2.28
PVT1-219ENST00000523427 C2CD4DB7Z1M9 353 aa29.27■■■□□ 2.28
PVT1-219ENST00000523427 CXCL14O95715 111 aa29.27■■■□□ 2.28
PVT1-219ENST00000523427 DARSP14868 501 aaKnown RBP29.27■■■□□ 2.28
PVT1-219ENST00000523427 UGCGQ16739 394 aa29.27■■■□□ 2.28
PVT1-219ENST00000523427 MCTP2Q6DN12 878 aa29.27■■■□□ 2.28
PVT1-219ENST00000523427 GJA10Q969M2 543 aa29.27■■■□□ 2.28
PVT1-219ENST00000523427 KMT2EQ8IZD2 1858 aa29.27■■■□□ 2.28
PVT1-219ENST00000523427 ST18O60284 1047 aa29.26■■■□□ 2.27
PVT1-219ENST00000523427 CLASP2O75122 1294 aaKnown RBP29.26■■■□□ 2.27
PVT1-219ENST00000523427 GNA11P29992 359 aa29.26■■■□□ 2.27
PVT1-219ENST00000523427 ALDH7A1P49419 539 aaKnown RBP29.26■■■□□ 2.27
PVT1-219ENST00000523427 AKAP17AQ02040 695 aaKnown RBP29.26■■■□□ 2.27
PVT1-219ENST00000523427 TBC1D8BQ0IIM8 1120 aa29.26■■■□□ 2.27
PVT1-219ENST00000523427 KRT32Q14532 448 aa29.26■■■□□ 2.27
PVT1-219ENST00000523427 RARS2Q5T160 578 aaKnown RBP29.26■■■□□ 2.27
PVT1-219ENST00000523427 KANK3Q6NY19 840 aa29.26■■■□□ 2.27
PVT1-219ENST00000523427 Q6ZUG5 572 aa29.26■■■□□ 2.27
PVT1-219ENST00000523427 AUTS2Q8WXX7 1259 aa29.26■■■□□ 2.27
PVT1-219ENST00000523427 ADAM7Q9H2U9 754 aa29.26■■■□□ 2.27
PVT1-219ENST00000523427 SMOC2Q9H3U7 446 aa29.26■■■□□ 2.27
PVT1-219ENST00000523427 A0A0U1RQF3 1178 aa29.25■■■□□ 2.27
PVT1-219ENST00000523427 BCAR1P56945 870 aa29.25■■■□□ 2.27
PVT1-219ENST00000523427 DRP2Q13474 957 aa29.25■■■□□ 2.27
PVT1-219ENST00000523427 TSGA10IPQ3SY00 556 aa29.25■■■□□ 2.27
PVT1-219ENST00000523427 BRF1Q92994 677 aa29.25■■■□□ 2.27
PVT1-219ENST00000523427 LENG9Q96B70 501 aa29.25■■■□□ 2.27
PVT1-219ENST00000523427 TMEM169Q96HH4 297 aa29.25■■■□□ 2.27
PVT1-219ENST00000523427 MSH4O15457 936 aa29.24■■■□□ 2.27
PVT1-219ENST00000523427 GAS7O60861 476 aa29.24■■■□□ 2.27
PVT1-219ENST00000523427 ZC3H11AO75152 810 aaKnown RBP eCLIP29.24■■■□□ 2.27
PVT1-219ENST00000523427 BRD1O95696 1058 aa29.24■■■□□ 2.27
PVT1-219ENST00000523427 CIITAP33076 1130 aa29.24■■■□□ 2.27
PVT1-219ENST00000523427 LPPQ93052 612 aa29.24■■■□□ 2.27
PVT1-219ENST00000523427 CCDC136Q96JN2 1154 aa29.24■■■□□ 2.27
PVT1-219ENST00000523427 SH2D3AQ9BRG2 576 aa29.24■■■□□ 2.27
PVT1-219ENST00000523427 DACT1Q9NYF0 836 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms