RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 DDR1Q08345 913 aa7.55□□□□□ -1.2
LINC00534-203ENST00000523406 HSP90AA2PQ14568 343 aaPredicted RBP7.55□□□□□ -1.2
LINC00534-203ENST00000523406 ZNF827Q17R98 1081 aa7.55□□□□□ -1.2
LINC00534-203ENST00000523406 COL23A1Q86Y22 540 aaPredicted RBP7.55□□□□□ -1.2
LINC00534-203ENST00000523406 MIGA1Q8NAN2 632 aa7.55□□□□□ -1.2
LINC00534-203ENST00000523406 FAM184AQ8NB25 1140 aa7.55□□□□□ -1.2
LINC00534-203ENST00000523406 UBE2FQ969M7 185 aa7.55□□□□□ -1.2
LINC00534-203ENST00000523406 ZDHHC15Q96MV8 337 aa7.55□□□□□ -1.2
LINC00534-203ENST00000523406 CRAMP1Q96RY5 1269 aa7.55□□□□□ -1.2
LINC00534-203ENST00000523406 AARSD1Q9BTE6 412 aaKnown RBP7.55□□□□□ -1.2
LINC00534-203ENST00000523406 RNF112Q9ULX5 631 aa7.55□□□□□ -1.2
LINC00534-203ENST00000523406 KIF3AQ9Y496 699 aa7.55□□□□□ -1.2
LINC00534-203ENST00000523406 PTCH2Q9Y6C5 1203 aa7.55□□□□□ -1.2
LINC00534-203ENST00000523406 DDX49Q9Y6V7 483 aaKnown RBP7.55□□□□□ -1.2
LINC00534-203ENST00000523406 TAF1LQ8IZX4 1826 aa7.55□□□□□ -1.2
LINC00534-203ENST00000523406 PDS5AQ29RF7 1337 aaKnown RBP7.54□□□□□ -1.2
LINC00534-203ENST00000523406 PNPLA7Q6ZV29 1317 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 TRAV20A0A0B4J274 112 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 A0A0G2JLW4 131 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 ESYT3A0FGR9 886 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 PFKFB2O60825 505 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 UFL1O94874 794 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 KCNH1O95259 989 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 KLRK1P26718 216 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 BMP8BP34820 402 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 GRIA2P42262 883 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 GPSM2P81274 684 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 PRKCQQ04759 706 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 CRY2Q49AN0 593 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 ZC3H12BQ5HYM0 836 aaKnown RBP7.54□□□□□ -1.2
LINC00534-203ENST00000523406 FOXB2Q5VYV0 432 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 GTF2IRD2BQ6EKJ0 949 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 TMED8Q6PL24 325 aaPredicted RBP7.54□□□□□ -1.2
LINC00534-203ENST00000523406 CRTC3Q6UUV7 619 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 MFSD6Q6ZSS7 791 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 CHST3Q7LGC8 479 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 GTF2IRD2Q86UP8 949 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 DZIP1Q86YF9 867 aaKnown RBP7.54□□□□□ -1.2
LINC00534-203ENST00000523406 IFNL3Q8IZI9 196 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 LCORLQ8N3X6 602 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 WDR66Q8TBY9 1149 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 BTN2A2Q8WVV5 523 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 GTF3C6Q969F1 213 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 HRASLS5Q96KN8 279 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 BRIP1Q9BX63 1249 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 RNF41Q9H4P4 317 aaPredicted RBP7.54□□□□□ -1.2
LINC00534-203ENST00000523406 TOMM22Q9NS69 142 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 STK32BQ9NY57 414 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 VAV3Q9UKW4 847 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 BRWD3Q6RI45 1802 aa7.54□□□□□ -1.2
LINC00534-203ENST00000523406 WDR19Q8NEZ3 1342 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 COL24A1Q17RW2 1714 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 AKAP11Q9UKA4 1901 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 GSG1L2A8MUP6 293 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 H3BQV1 296 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 FOXP2O15409 715 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 PRKAB2O43741 272 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 DHX16O60231 1041 aaKnown RBP7.53□□□□□ -1.2
LINC00534-203ENST00000523406 MMP10P09238 476 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 FGFR1P11362 822 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 NPR1P16066 1061 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 PDE6BP35913 854 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 GRIK1P39086 918 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 GSTO1P78417 241 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 TMEM67Q5HYA8 995 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 RRP12Q5JTH9 1297 aaKnown RBP7.53□□□□□ -1.2
LINC00534-203ENST00000523406 YOD1Q5VVQ6 348 aaPredicted RBP7.53□□□□□ -1.2
LINC00534-203ENST00000523406 NFXL1Q6ZNB6 911 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 TMPRSS7Q7RTY8 843 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 MB21D2Q8IYB1 491 aaPredicted RBP7.53□□□□□ -1.2
LINC00534-203ENST00000523406 ZSWIM2Q8NEG5 633 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 DDX11Q96FC9 970 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 ZNF274Q96GC6 653 aaPredicted RBP7.53□□□□□ -1.2
LINC00534-203ENST00000523406 LLPHQ9BRT6 129 aaKnown RBP7.53□□□□□ -1.2
LINC00534-203ENST00000523406 NOL10Q9BSC4 688 aaKnown RBP7.53□□□□□ -1.2
LINC00534-203ENST00000523406 MCMBPQ9BTE3 642 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 KRT23Q9C075 422 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 NKX2-4Q9H2Z4 354 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 ATP13A1Q9HD20 1204 aa7.53□□□□□ -1.2
LINC00534-203ENST00000523406 ZMYM6O95789 1325 aa7.52□□□□□ -1.2
LINC00534-203ENST00000523406 ARAP2Q8WZ64 1704 aa7.52□□□□□ -1.2
LINC00534-203ENST00000523406 KLF18A0A0U1RQI7 1052 aa7.52□□□□□ -1.21
LINC00534-203ENST00000523406 KLRG2A4D1S0 409 aaPredicted RBP7.52□□□□□ -1.21
LINC00534-203ENST00000523406 GOLGA8BA8MQT2 603 aa7.52□□□□□ -1.21
LINC00534-203ENST00000523406 CPLX1O14810 134 aa7.52□□□□□ -1.21
LINC00534-203ENST00000523406 COBLO75128 1261 aa7.52□□□□□ -1.21
LINC00534-203ENST00000523406 ZNF205O95201 554 aa7.52□□□□□ -1.21
LINC00534-203ENST00000523406 ESR1P03372 595 aa7.52□□□□□ -1.21
LINC00534-203ENST00000523406 LDHCP07864 332 aa7.52□□□□□ -1.21
LINC00534-203ENST00000523406 SLC3A2P08195 630 aaKnown RBP7.52□□□□□ -1.21
LINC00534-203ENST00000523406 VAV1P15498 845 aa7.52□□□□□ -1.21
LINC00534-203ENST00000523406 HSD3B2P26439 372 aa7.52□□□□□ -1.21
LINC00534-203ENST00000523406 PDIA3P30101 505 aaKnown RBP7.52□□□□□ -1.21
LINC00534-203ENST00000523406 ALDH1B1P30837 517 aa7.52□□□□□ -1.21
LINC00534-203ENST00000523406 CCT2P78371 535 aaKnown RBP7.52□□□□□ -1.21
LINC00534-203ENST00000523406 HMGN5P82970 282 aaKnown RBP7.52□□□□□ -1.21
LINC00534-203ENST00000523406 AMPD2Q01433 879 aa7.52□□□□□ -1.21
LINC00534-203ENST00000523406 POU4F1Q01851 419 aa7.52□□□□□ -1.21
LINC00534-203ENST00000523406 MECOMQ03112 1051 aa7.52□□□□□ -1.21
LINC00534-203ENST00000523406 CYP4F3Q08477 520 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms