RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 SH2D3AQ9BRG2 576 aa18.2■□□□□ 0.5
CLN8-206ENST00000523237 LLPHQ9BRT6 129 aaKnown RBP18.2■□□□□ 0.5
CLN8-206ENST00000523237 LMAN2LQ9H0V9 348 aa18.2■□□□□ 0.5
CLN8-206ENST00000523237 ARID2Q68CP9 1835 aa18.19■□□□□ 0.5
CLN8-206ENST00000523237 ZSCAN20P17040 1043 aaPredicted RBP18.19■□□□□ 0.5
CLN8-206ENST00000523237 DRP2Q13474 957 aa18.19■□□□□ 0.5
CLN8-206ENST00000523237 DSC3Q14574 896 aa18.19■□□□□ 0.5
CLN8-206ENST00000523237 SAFBQ15424 915 aaKnown RBP eCLIP18.19■□□□□ 0.5
CLN8-206ENST00000523237 NAALADL2Q58DX5 795 aa18.19■□□□□ 0.5
CLN8-206ENST00000523237 PLA2G4FQ68DD2 849 aa18.19■□□□□ 0.5
CLN8-206ENST00000523237 P2RX5Q93086 422 aa18.19■□□□□ 0.5
CLN8-206ENST00000523237 UHRF1Q96T88 793 aaPredicted RBP18.19■□□□□ 0.5
CLN8-206ENST00000523237 GCOM2Q9BZD3 368 aaPredicted RBP18.19■□□□□ 0.5
CLN8-206ENST00000523237 NSUN3Q9H649 340 aaKnown RBP18.19■□□□□ 0.5
CLN8-206ENST00000523237 ELAC1Q9H777 363 aaKnown RBP18.19■□□□□ 0.5
CLN8-206ENST00000523237 CYP26B1Q9NR63 512 aa18.19■□□□□ 0.5
CLN8-206ENST00000523237 TMEM161AQ9NX61 479 aa18.19■□□□□ 0.5
CLN8-206ENST00000523237 TNFRSF10AO00220 468 aa18.18■□□□□ 0.5
CLN8-206ENST00000523237 GRM6O15303 877 aa18.18■□□□□ 0.5
CLN8-206ENST00000523237 MAFO75444 373 aaPredicted RBP18.18■□□□□ 0.5
CLN8-206ENST00000523237 GATMP50440 423 aa18.18■□□□□ 0.5
CLN8-206ENST00000523237 FAM189BP81408 668 aa18.18■□□□□ 0.5
CLN8-206ENST00000523237 SPIRE1Q08AE8 756 aa18.18■□□□□ 0.5
CLN8-206ENST00000523237 CALCRLQ16602 461 aa18.18■□□□□ 0.5
CLN8-206ENST00000523237 C4orf19Q8IY42 314 aa18.18■□□□□ 0.5
CLN8-206ENST00000523237 EXOC8Q8IYI6 725 aa18.18■□□□□ 0.5
CLN8-206ENST00000523237 SLC7A3Q8WY07 619 aa18.18■□□□□ 0.5
CLN8-206ENST00000523237 KIF2CQ99661 725 aa18.18■□□□□ 0.5
CLN8-206ENST00000523237 LXNQ9BS40 222 aa18.18■□□□□ 0.5
CLN8-206ENST00000523237 UBE2ZQ9H832 354 aaPredicted RBP18.18■□□□□ 0.5
CLN8-206ENST00000523237 ATP6V0A4Q9HBG4 840 aa18.18■□□□□ 0.5
CLN8-206ENST00000523237 SH2B1Q9NRF2 756 aaPredicted RBP18.18■□□□□ 0.5
CLN8-206ENST00000523237 SUCLA2Q9P2R7 463 aaPredicted RBP18.18■□□□□ 0.5
CLN8-206ENST00000523237 PCDHA12Q9UN75 941 aa18.18■□□□□ 0.5
CLN8-206ENST00000523237 PPME1Q9Y570 386 aa18.18■□□□□ 0.5
CLN8-206ENST00000523237 XIRP2A4UGR9 3374 aa18.18■□□□□ 0.5
CLN8-206ENST00000523237 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.17■□□□□ 0.5
CLN8-206ENST00000523237 TBKBP1A7MCY6 615 aa18.17■□□□□ 0.5
CLN8-206ENST00000523237 NEMFO60524 1076 aa18.17■□□□□ 0.5
CLN8-206ENST00000523237 TCEAL5Q5H9L2 206 aa18.17■□□□□ 0.5
CLN8-206ENST00000523237 OTUD6AQ7L8S5 288 aa18.17■□□□□ 0.5
CLN8-206ENST00000523237 ZNF410Q86VK4 478 aa18.17■□□□□ 0.5
CLN8-206ENST00000523237 C8orf76Q96K31 380 aa18.17■□□□□ 0.5
CLN8-206ENST00000523237 CEP170P1Q96L14 293 aa18.17■□□□□ 0.5
CLN8-206ENST00000523237 INO80BQ9C086 356 aaPredicted RBP18.17■□□□□ 0.5
CLN8-206ENST00000523237 ZSWIM4Q9H7M6 989 aa18.17■□□□□ 0.5
CLN8-206ENST00000523237 WRAP73Q9P2S5 460 aaPredicted RBP18.17■□□□□ 0.5
CLN8-206ENST00000523237 PLAGL2Q9UPG8 496 aa18.17■□□□□ 0.5
CLN8-206ENST00000523237 PLXNA4Q9HCM2 1894 aa18.16■□□□□ 0.5
CLN8-206ENST00000523237 SPTBN5Q9NRC6 3674 aaKnown RBP18.16■□□□□ 0.5
CLN8-206ENST00000523237 A0A087WZ62 844 aa18.16■□□□□ 0.5
CLN8-206ENST00000523237 HOXA2O43364 376 aa18.16■□□□□ 0.5
CLN8-206ENST00000523237 YWHABP31946 246 aaKnown RBP18.16■□□□□ 0.5
CLN8-206ENST00000523237 RBM25P49756 843 aaKnown RBP18.16■□□□□ 0.5
CLN8-206ENST00000523237 POLGP54098 1239 aaPredicted RBP18.16■□□□□ 0.5
CLN8-206ENST00000523237 NPEPPSP55786 919 aa18.16■□□□□ 0.5
CLN8-206ENST00000523237 HMGN5P82970 282 aaKnown RBP18.16■□□□□ 0.5
CLN8-206ENST00000523237 GUCY1B3Q02153 619 aa18.16■□□□□ 0.5
CLN8-206ENST00000523237 SPOUT1Q5T280 376 aaKnown RBP18.16■□□□□ 0.5
CLN8-206ENST00000523237 FAM102BQ5T8I3 360 aa18.16■□□□□ 0.5
CLN8-206ENST00000523237 RHPN2Q8IUC4 686 aa18.16■□□□□ 0.5
CLN8-206ENST00000523237 DYDC2Q96IM9 177 aa18.16■□□□□ 0.5
CLN8-206ENST00000523237 FDXACB1Q9BRP7 624 aaPredicted RBP18.16■□□□□ 0.5
CLN8-206ENST00000523237 TTC12Q9H892 705 aaPredicted RBP18.16■□□□□ 0.5
CLN8-206ENST00000523237 ALG13Q9NP73 1137 aaKnown RBP18.16■□□□□ 0.5
CLN8-206ENST00000523237 AAASQ9NRG9 546 aa18.16■□□□□ 0.5
CLN8-206ENST00000523237 RGL1Q9NZL6 768 aa18.16■□□□□ 0.5
CLN8-206ENST00000523237 BRWD1Q9NSI6 2320 aa18.16■□□□□ 0.5
CLN8-206ENST00000523237 TTC28Q96AY4 2481 aa18.15■□□□□ 0.5
CLN8-206ENST00000523237 FGFR1P11362 822 aa18.15■□□□□ 0.5
CLN8-206ENST00000523237 FGFR4P22455 802 aa18.15■□□□□ 0.5
CLN8-206ENST00000523237 KCNA5P22460 613 aa18.15■□□□□ 0.5
CLN8-206ENST00000523237 SFPQP23246 707 aaKnown RBP eCLIP18.15■□□□□ 0.5
CLN8-206ENST00000523237 RFC5P40937 340 aa18.15■□□□□ 0.5
CLN8-206ENST00000523237 CYP4A11Q02928 519 aa18.15■□□□□ 0.5
CLN8-206ENST00000523237 CTTNQ14247 550 aaKnown RBP18.15■□□□□ 0.5
CLN8-206ENST00000523237 TPH2Q8IWU9 490 aa18.15■□□□□ 0.5
CLN8-206ENST00000523237 KLHL23Q8NBE8 558 aa18.15■□□□□ 0.5
CLN8-206ENST00000523237 NEK9Q8TD19 979 aa18.15■□□□□ 0.5
CLN8-206ENST00000523237 NLRP4Q96MN2 994 aa18.15■□□□□ 0.5
CLN8-206ENST00000523237 DHX33Q9H6R0 707 aaKnown RBP18.15■□□□□ 0.5
CLN8-206ENST00000523237 DACT1Q9NYF0 836 aa18.15■□□□□ 0.5
CLN8-206ENST00000523237 PCDHB12Q9Y5F1 795 aa18.15■□□□□ 0.5
CLN8-206ENST00000523237 WNT7AO00755 349 aa18.14■□□□□ 0.49
CLN8-206ENST00000523237 NCK2O43639 380 aa18.14■□□□□ 0.49
CLN8-206ENST00000523237 GAS2O43903 313 aaKnown RBP18.14■□□□□ 0.49
CLN8-206ENST00000523237 CSDE1O75534 798 aaKnown RBP18.14■□□□□ 0.49
CLN8-206ENST00000523237 ITGB1P05556 798 aa18.14■□□□□ 0.49
CLN8-206ENST00000523237 TXKP42681 527 aa18.14■□□□□ 0.49
CLN8-206ENST00000523237 LEXMQ3ZCV2 418 aa18.14■□□□□ 0.49
CLN8-206ENST00000523237 ECHDC2Q86YB7 292 aa18.14■□□□□ 0.49
CLN8-206ENST00000523237 ABI1Q8IZP0 508 aa18.14■□□□□ 0.49
CLN8-206ENST00000523237 ZNF579Q8NAF0 562 aaKnown RBP18.14■□□□□ 0.49
CLN8-206ENST00000523237 FAM184AQ8NB25 1140 aa18.14■□□□□ 0.49
CLN8-206ENST00000523237 SPPL3Q8TCT6 385 aa18.14■□□□□ 0.49
CLN8-206ENST00000523237 PABPC5Q96DU9 382 aaKnown RBP18.14■□□□□ 0.49
CLN8-206ENST00000523237 EIF2AK1Q9BQI3 630 aaKnown RBP18.14■□□□□ 0.49
CLN8-206ENST00000523237 TMEM117Q9H0C3 514 aa18.14■□□□□ 0.49
CLN8-206ENST00000523237 FOXP1Q9H334 677 aaPredicted RBP18.14■□□□□ 0.49
CLN8-206ENST00000523237 CHST12Q9NRB3 414 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms