RNA–Protein interactions for RNA: ENST00000522878.5

ARFGEF1-208, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-208ENST00000522878 EAF1Q96JC9 268 aaPredicted RBP6.32□□□□□ -1.4
ARFGEF1-208ENST00000522878 CEP89Q96ST8 783 aa6.32□□□□□ -1.4
ARFGEF1-208ENST00000522878 TBC1D17Q9HA65 648 aa6.32□□□□□ -1.4
ARFGEF1-208ENST00000522878 TYW1Q9NV66 732 aaKnown RBP6.32□□□□□ -1.4
ARFGEF1-208ENST00000522878 PGPEP1Q9NXJ5 209 aa6.32□□□□□ -1.4
ARFGEF1-208ENST00000522878 SLC5A4Q9NY91 659 aa6.32□□□□□ -1.4
ARFGEF1-208ENST00000522878 FAM184BQ9ULE4 1060 aa6.32□□□□□ -1.4
ARFGEF1-208ENST00000522878 STAB1Q9NY15 2570 aa6.32□□□□□ -1.4
ARFGEF1-208ENST00000522878 ABHD14A-ACY1A0A1B0GW23 586 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 C19orf81C9J6K1 198 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 CABYRO75952 493 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 CSPG5O95196 566 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 GDF11O95390 407 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 SNAI1O95863 264 aaPredicted RBP6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 CXCL10P02778 98 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 PDGFRBP09619 1106 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 RLBP1P12271 317 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 DNAJB1P25685 340 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 ADD1P35611 737 aaKnown RBP6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 GYG1P46976 350 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 NRIP1P48552 1158 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 GYS2P54840 703 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 RALBP1Q15311 655 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 ZNF792Q3KQV3 632 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 TNNI3KQ59H18 835 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 PDE12Q6L8Q7 609 aaKnown RBP6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 SYCE2Q6PIF2 218 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 PCSK4Q6UW60 755 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 ZDHHC14Q8IZN3 488 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 STAG1Q8WVM7 1258 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 PMM1Q92871 262 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 TMEM74Q96NL1 305 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 CDK15Q96Q40 435 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 DNAJC7Q99615 494 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 NT5C1AQ9BXI3 368 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 IDI2Q9BXS1 227 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 NIFKQ9BYG3 293 aaKnown RBP6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 UBA5Q9GZZ9 404 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 CCDC113Q9H0I3 377 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 POMKQ9H5K3 350 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 AS3MTQ9HBK9 375 aa6.31□□□□□ -1.4
ARFGEF1-208ENST00000522878 ESYT3A0FGR9 886 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 F6X3S4 739 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 WDR46O15213 610 aaKnown RBP6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 FOXD2O60548 495 aaPredicted RBP6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 LRRN2O75325 713 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 ENTPD3O75355 529 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 POLR3DP05423 398 aaPredicted RBP6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 RB1P06400 928 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 CTNNB1P35222 781 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 GRM5P41594 1212 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 CSRP3P50461 194 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 CENPCQ03188 943 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 KCNC3Q14003 757 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 UBE4AQ14139 1066 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 SHROOM1Q2M3G4 852 aaPredicted RBP6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 KIAA1211LQ6NV74 962 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 MRPL14Q6P1L8 145 aaKnown RBP6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 APBB1IPQ7Z5R6 666 aaPredicted RBP6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 MORC1Q86VD1 984 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 FMNL3Q8IVF7 1028 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 TEX2Q8IWB9 1127 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 CCDC146Q8IYE0 955 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 FAM181AQ8N9Y4 354 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 C11orf84Q9BUA3 381 aaPredicted RBP6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 SRRTQ9BXP5 876 aaKnown RBP6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 SIL1Q9H173 461 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 SUV39H2Q9H5I1 410 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 DDX4Q9NQI0 724 aaKnown RBP6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 MBIPQ9NS73 344 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 HSPBP1Q9NZL4 362 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 GABBR1Q9UBS5 961 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 FBXL21Q9UKT6 434 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 RAXQ9Y2V3 346 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 PAXBP1Q9Y5B6 917 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 HRH3Q9Y5N1 445 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 HCFC2Q9Y5Z7 792 aa6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 FNDC1Q4ZHG4 1894 aaPredicted RBP6.3□□□□□ -1.4
ARFGEF1-208ENST00000522878 LCTP09848 1927 aa6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 TGFBR3LH3BV60 316 aa6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 CREB3O43889 395 aa6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 NBNO60934 754 aa6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 FRAT2O75474 233 aaPredicted RBP6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 SUPT20HL2P0C7V6 817 aa6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 ITGA6P23229 1130 aa6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 PRKAR2BP31323 418 aa6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 CFHR1Q03591 330 aa6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 CSTF1Q05048 431 aaKnown RBP6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 SCAPQ12770 1279 aa6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 CLN3Q13286 438 aa6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 SF3A2Q15428 464 aaKnown RBP6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 C4orf17Q53FE4 359 aa6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 ODR4Q5SWX8 454 aa6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 CATSPERGQ6ZRH7 1159 aa6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 C16orf86Q6ZW13 317 aa6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 KIAA0907Q7Z7F0 614 aaPredicted RBP6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 FERMT3Q86UX7 667 aa6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 LILRB2Q8N423 598 aa6.29□□□□□ -1.4
ARFGEF1-208ENST00000522878 CCDC191Q8NCU4 936 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms