RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-231ENST00000521941 PAN2Q504Q3 1202 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 FAM173BQ6P4H8 233 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 DTHD1Q6ZMT9 781 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 BRAPQ7Z569 592 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 CATSPER3Q86XQ3 398 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 MICALL1Q8N3F8 863 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 C4orf32Q8N8J7 132 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 PSPC1Q8WXF1 523 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 ARNTL2Q8WYA1 636 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 SNX21Q969T3 373 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 INTS4Q96HW7 963 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 GAS2L1Q99501 681 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 RAD9AQ99638 391 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 ADAM2Q99965 735 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 HSD17B14Q9BPX1 270 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 JPH2Q9BR39 696 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 FDXACB1Q9BRP7 624 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 RAB34Q9BZG1 259 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 TMX1Q9H3N1 280 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 DHX33Q9H6R0 707 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 ERVK-5Q9HDB9 667 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 TUFT1Q9NNX1 390 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 COL4A3BPQ9Y5P4 624 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 MYO9BQ13459 2157 aa9.33□□□□□ -0.92
CTNNA1-231ENST00000521941 IGKV6-21A0A0C4DH24 114 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 RFXAPO00287 272 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 ENPP3O14638 875 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 GPR182O15218 404 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 SRGAP2CP0DJJ0 459 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 SPATA31C1P0DKV0 1188 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 IGFBP4P22692 258 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 EIF4BP23588 611 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 CDC25AP30304 524 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 RARRES1P49788 294 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 ATP2C1P98194 919 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 TAP1Q03518 808 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 CEBPZQ03701 1054 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 RESTQ13127 1097 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 ODR4Q5SWX8 454 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 RNF169Q8NCN4 708 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 TOP1MTQ969P6 601 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 PLIN2Q99541 437 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 FTHL17Q9BXU8 183 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 GCOM2Q9BZD3 368 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 ADAMTS10Q9H324 1103 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 ATP6V0A4Q9HBG4 840 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 XPNPEP1Q9NQW7 623 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 ANKEF1Q9NU02 776 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 DDX19AQ9NUU7 478 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 LRFN2Q9ULH4 789 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 SQORQ9Y6N5 450 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 KIAA1671Q9BY89 1806 aa9.32□□□□□ -0.92
CTNNA1-231ENST00000521941 TTC3P53804 2025 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 LINC01553A4QN01 128 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 ARHGEF35A5YM69 484 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 EPOPA6NHQ4 379 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 LAD1O00515 517 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 STX6O43752 255 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 CSPG5O95196 566 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 LYPLA2O95372 231 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 DARSP14868 501 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 ZSCAN20P17040 1043 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 RPA1P27694 616 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 PRPHP41219 470 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 GATMP50440 423 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 LAMTOR4Q0VGL1 99 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 SF3A1Q15459 793 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 IL17AQ16552 155 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 ECM1Q16610 540 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 FOXD4L6Q3SYB3 417 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 KRT79Q5XKE5 535 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 FOXD4L3Q6VB84 417 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 CATSPER4Q7RTX7 472 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 RTN4RL1Q86UN2 441 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 ZNF410Q86VK4 478 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 RNF149Q8NC42 400 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 RASSF8Q8NHQ8 419 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 GDPD5Q8WTR4 605 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 TCP11Q8WWU5 503 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 PRPF31Q8WWY3 499 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 PPM1EQ8WY54 764 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 CDK5RAP3Q96JB5 506 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 NACC1Q96RE7 527 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 POLR3CQ9BUI4 534 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 POLR3FQ9H1D9 316 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 TSPYL2Q9H2G4 693 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 GPRC5CQ9NQ84 441 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 KIAA1024Q9UPX6 916 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 MTMR6Q9Y217 621 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 PIN4Q9Y237 131 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 STXBP5LQ9Y2K9 1186 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 PPME1Q9Y570 386 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 INSL6Q9Y581 213 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 CLIC4Q9Y696 253 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 ADGRA3Q8IWK6 1321 aa9.31□□□□□ -0.92
CTNNA1-231ENST00000521941 RALGAPA2Q2PPJ7 1873 aa9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 LRRIQ4A6NIV6 560 aa9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 GAS2O43903 313 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 DGAT1O75907 488 aa9.3□□□□□ -0.92
CTNNA1-231ENST00000521941 SSBP05455 408 aaKnown RBP eCLIP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms