RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 ACTR2P61160 394 aa12.68□□□□□ -0.38
CSMD1-210ENST00000521646 NLRX1Q86UT6 975 aa12.68□□□□□ -0.38
CSMD1-210ENST00000521646 PRSS33Q8NF86 280 aa12.68□□□□□ -0.38
CSMD1-210ENST00000521646 GLG1Q92896 1179 aa12.68□□□□□ -0.38
CSMD1-210ENST00000521646 C11orf84Q9BUA3 381 aaPredicted RBP12.68□□□□□ -0.38
CSMD1-210ENST00000521646 PRKAG3Q9UGI9 489 aa12.68□□□□□ -0.38
CSMD1-210ENST00000521646 BRPF3Q9ULD4 1205 aa12.68□□□□□ -0.38
CSMD1-210ENST00000521646 EVPLQ92817 2033 aa12.67□□□□□ -0.38
CSMD1-210ENST00000521646 IGKV6D-21A0A0A0MT36 114 aa12.67□□□□□ -0.38
CSMD1-210ENST00000521646 EDIL3O43854 480 aa12.67□□□□□ -0.38
CSMD1-210ENST00000521646 EYA4O95677 639 aa12.67□□□□□ -0.38
CSMD1-210ENST00000521646 ALADP13716 330 aa12.67□□□□□ -0.38
CSMD1-210ENST00000521646 MRE11P49959 708 aa12.67□□□□□ -0.38
CSMD1-210ENST00000521646 SMAD4Q13485 552 aaKnown RBP12.67□□□□□ -0.38
CSMD1-210ENST00000521646 NECTIN1Q15223 517 aa12.67□□□□□ -0.38
CSMD1-210ENST00000521646 HERC4Q5GLZ8 1057 aaPredicted RBP12.67□□□□□ -0.38
CSMD1-210ENST00000521646 FAM102BQ5T8I3 360 aa12.67□□□□□ -0.38
CSMD1-210ENST00000521646 RBM23Q86U06 439 aaKnown RBP12.67□□□□□ -0.38
CSMD1-210ENST00000521646 SMRP1Q8NCR6 262 aa12.67□□□□□ -0.38
CSMD1-210ENST00000521646 CTCFLQ8NI51 663 aaPredicted RBP12.67□□□□□ -0.38
CSMD1-210ENST00000521646 POF1BQ8WVV4 589 aa12.67□□□□□ -0.38
CSMD1-210ENST00000521646 PPP1R16BQ96T49 567 aa12.67□□□□□ -0.38
CSMD1-210ENST00000521646 MXRA8Q9BRK3 442 aa12.67□□□□□ -0.38
CSMD1-210ENST00000521646 LMAN2LQ9H0V9 348 aa12.67□□□□□ -0.38
CSMD1-210ENST00000521646 SMARCAD1Q9H4L7 1026 aa12.67□□□□□ -0.38
CSMD1-210ENST00000521646 JPH1Q9HDC5 661 aaPredicted RBP12.67□□□□□ -0.38
CSMD1-210ENST00000521646 RNF19AQ9NV58 838 aa12.67□□□□□ -0.38
CSMD1-210ENST00000521646 NOC2LQ9Y3T9 749 aaKnown RBP12.67□□□□□ -0.38
CSMD1-210ENST00000521646 TRPV2Q9Y5S1 764 aa12.67□□□□□ -0.38
CSMD1-210ENST00000521646 FAM86B1E9PN63 330 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 PER2O15055 1255 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 DHX15O43143 795 aaKnown RBP12.66□□□□□ -0.38
CSMD1-210ENST00000521646 ATG7O95352 703 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 FAM86B2P0C5J1 330 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 ERVFC1P60507 584 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 SART3Q15020 963 aaKnown RBP12.66□□□□□ -0.38
CSMD1-210ENST00000521646 ADCK5Q3MIX3 580 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 CREB3L3Q68CJ9 461 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 MTHFD1LQ6UB35 978 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 HEATR3Q7Z4Q2 680 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 MICU3Q86XE3 530 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 CCDC60Q8IWA6 550 aaPredicted RBP12.66□□□□□ -0.38
CSMD1-210ENST00000521646 CMTR2Q8IYT2 770 aaKnown RBP12.66□□□□□ -0.38
CSMD1-210ENST00000521646 KIAA0319LQ8IZA0 1049 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 FANCBQ8NB91 859 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 CRYGNQ8WXF5 182 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 CUL5Q93034 780 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 CELF4Q9BZC1 486 aaKnown RBP12.66□□□□□ -0.38
CSMD1-210ENST00000521646 AGO4Q9HCK5 861 aaKnown RBP12.66□□□□□ -0.38
CSMD1-210ENST00000521646 ERVK-5Q9HDB9 667 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 MAP10Q9P2G4 905 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 SLC9A2Q9UBY0 812 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 CD207Q9UJ71 328 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 PCDHA2Q9Y5H9 948 aa12.66□□□□□ -0.38
CSMD1-210ENST00000521646 LOC730098B7Z3J9 87 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 DDX39AO00148 427 aaKnown RBP12.65□□□□□ -0.38
CSMD1-210ENST00000521646 STXBP3O00186 592 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 PPFIA3O75145 1194 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 SCG2P13521 617 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 IBSPP21815 317 aaPredicted RBP12.65□□□□□ -0.38
CSMD1-210ENST00000521646 CDC27P30260 824 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 LIFRP42702 1097 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 NRIP1P48552 1158 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 TRAF1Q13077 416 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 KCNC3Q14003 757 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 LRRC55Q6ZSA7 311 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 NPAS4Q8IUM7 802 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 EFHBQ8N7U6 833 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 ZNF511Q8NB15 262 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 RUFY2Q8WXA3 655 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 P2RX5Q93086 422 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 PLVAPQ9BX97 442 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 SEC63Q9UGP8 760 aaKnown RBP12.65□□□□□ -0.38
CSMD1-210ENST00000521646 USP15Q9Y4E8 981 aaPredicted RBP12.65□□□□□ -0.38
CSMD1-210ENST00000521646 DCHS1Q96JQ0 3298 aa12.65□□□□□ -0.38
CSMD1-210ENST00000521646 KDM3AQ9Y4C1 1321 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 WDR81Q562E7 1941 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 WDR87Q6ZQQ6 2873 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 CACNA1HO95180 2353 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 IGLV3-22A0A075B6J6 115 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 C9IYK1 514 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 MEIS1O00470 390 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 SIAH2O43255 324 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 FGFR1P11362 822 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 KLRC1P26715 233 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 KIF5BP33176 963 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 MCM5P33992 734 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 PBX3P40426 434 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 EXOSC10Q01780 885 aaKnown RBP12.64□□□□□ -0.39
CSMD1-210ENST00000521646 APOBRQ0VD83 1088 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 COASYQ13057 564 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 APOA5Q6Q788 366 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 ABHD15Q6UXT9 468 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 NFXL1Q6ZNB6 911 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 SGMS1Q86VZ5 419 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 GIMAP8Q8ND71 665 aaPredicted RBP12.64□□□□□ -0.39
CSMD1-210ENST00000521646 ATP8B4Q8TF62 1192 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 LZTS2Q9BRK4 669 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 ESYT1Q9BSJ8 1104 aa12.64□□□□□ -0.39
CSMD1-210ENST00000521646 ANO3Q9BYT9 981 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms