RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 LILRA2Q8N149 483 aa4.9□□□□□ -1.63
VPS13B-208ENST00000521037 CCDC191Q8NCU4 936 aa4.9□□□□□ -1.63
VPS13B-208ENST00000521037 NPLOC4Q8TAT6 608 aa4.9□□□□□ -1.63
VPS13B-208ENST00000521037 FAM151AQ8WW52 585 aa4.9□□□□□ -1.63
VPS13B-208ENST00000521037 FAM84BQ96KN1 310 aaPredicted RBP4.9□□□□□ -1.63
VPS13B-208ENST00000521037 CDC5LQ99459 802 aaKnown RBP4.9□□□□□ -1.63
VPS13B-208ENST00000521037 POLR3GLQ9BT43 218 aa4.9□□□□□ -1.63
VPS13B-208ENST00000521037 MRIQ9BWK5 157 aa4.9□□□□□ -1.63
VPS13B-208ENST00000521037 XYLT2Q9H1B5 865 aa4.9□□□□□ -1.63
VPS13B-208ENST00000521037 ASCC2Q9H1I8 757 aaPredicted RBP4.9□□□□□ -1.63
VPS13B-208ENST00000521037 TJP2Q9UDY2 1190 aa4.9□□□□□ -1.63
VPS13B-208ENST00000521037 RALYQ9UKM9 306 aaKnown RBP4.9□□□□□ -1.63
VPS13B-208ENST00000521037 ZNF281Q9Y2X9 895 aa4.9□□□□□ -1.63
VPS13B-208ENST00000521037 SMG1Q96Q15 3661 aaKnown RBP4.9□□□□□ -1.63
VPS13B-208ENST00000521037 LOC400499M0QZD8 3231 aa4.9□□□□□ -1.63
VPS13B-208ENST00000521037 UTYO14607 1347 aa4.9□□□□□ -1.63
VPS13B-208ENST00000521037 KMT2EQ8IZD2 1858 aa4.9□□□□□ -1.63
VPS13B-208ENST00000521037 UNC79Q9P2D8 2635 aa4.9□□□□□ -1.63
VPS13B-208ENST00000521037 ANKRD11Q6UB99 2663 aaPredicted RBP4.9□□□□□ -1.63
VPS13B-208ENST00000521037 TECTAO75443 2155 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 BPTFQ12830 3046 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 PROB1E7EW31 1015 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 PRPF40AO75400 957 aaKnown RBP4.89□□□□□ -1.63
VPS13B-208ENST00000521037 CLTBP09497 229 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 HOXC6P09630 235 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 IL9P15248 144 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 NCLP19338 710 aaKnown RBP4.89□□□□□ -1.63
VPS13B-208ENST00000521037 CYP7A1P22680 504 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 TPP2P29144 1249 aaPredicted RBP4.89□□□□□ -1.63
VPS13B-208ENST00000521037 ADCYAP1R1P41586 468 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 RBM5P52756 815 aaKnown RBP eCLIP4.89□□□□□ -1.63
VPS13B-208ENST00000521037 ETF1P62495 437 aaKnown RBP4.89□□□□□ -1.63
VPS13B-208ENST00000521037 PLCB3Q01970 1234 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 SKOR2Q2VWA4 1001 aaPredicted RBP4.89□□□□□ -1.63
VPS13B-208ENST00000521037 CCSAPQ6IQ19 270 aaPredicted RBP4.89□□□□□ -1.63
VPS13B-208ENST00000521037 FASTKD5Q7L8L6 764 aaKnown RBP4.89□□□□□ -1.63
VPS13B-208ENST00000521037 ANKRD33Q7Z3H0 272 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 GGNQ86UU5 652 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 CREG2Q8IUH2 290 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 MRPL41Q8IXM3 137 aaKnown RBP4.89□□□□□ -1.63
VPS13B-208ENST00000521037 CXorf38Q8TB03 319 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 PPP1R13LQ8WUF5 828 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 MYD88Q99836 296 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 PLA2G12BQ9BX93 195 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 GPR62Q9BZJ7 368 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 ZCCHC4Q9H5U6 513 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 FAM86C1Q9NVL1 165 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 BABAM1Q9NWV8 329 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 RTEL1Q9NZ71 1219 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 TSPYL4Q9UJ04 414 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 TACC3Q9Y6A5 838 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 CACNA1HO95180 2353 aa4.89□□□□□ -1.63
VPS13B-208ENST00000521037 NOTOA8MTQ0 251 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 TIMP1P01033 207 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 ACRP10323 421 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 ZKSCAN1P17029 563 aaPredicted RBP4.88□□□□□ -1.63
VPS13B-208ENST00000521037 CYP2C19P33261 490 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 GYG1P46976 350 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 GCLCP48506 637 aaPredicted RBP4.88□□□□□ -1.63
VPS13B-208ENST00000521037 TNNI2P48788 182 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 RABGGTBP53611 331 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 FOXO4P98177 505 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 FPGSQ05932 587 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 COL9A2Q14055 689 aaPredicted RBP4.88□□□□□ -1.63
VPS13B-208ENST00000521037 KCTD2Q14681 263 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 LRRC41Q15345 812 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 AAK1Q2M2I8 961 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 WIPI1Q5MNZ9 446 aaPredicted RBP4.88□□□□□ -1.63
VPS13B-208ENST00000521037 ANO1Q5XXA6 986 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 CDC42EP5Q6NZY7 148 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 DBX2Q6ZNG2 339 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 GADL1Q6ZQY3 521 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 ZNF365Q70YC5 407 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 GPR142Q7Z601 462 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 METTL16Q86W50 562 aaKnown RBP4.88□□□□□ -1.63
VPS13B-208ENST00000521037 SLC43A3Q8NBI5 491 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 APBA2Q99767 749 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 TINF2Q9BSI4 451 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 SGPP1Q9BX95 441 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 ANKRD2Q9GZV1 360 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 SLC6A17Q9H1V8 727 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 CWC22Q9HCG8 908 aaKnown RBP4.88□□□□□ -1.63
VPS13B-208ENST00000521037 CWC25Q9NXE8 425 aaPredicted RBP4.88□□□□□ -1.63
VPS13B-208ENST00000521037 COG5Q9UP83 839 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 DOCK1Q14185 1865 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 BRWD1Q9NSI6 2320 aa4.88□□□□□ -1.63
VPS13B-208ENST00000521037 DDTLA6NHG4 134 aaPredicted RBP4.87□□□□□ -1.63
VPS13B-208ENST00000521037 TRIM75PA6NK02 468 aa4.87□□□□□ -1.63
VPS13B-208ENST00000521037 GIPC1O14908 333 aa4.87□□□□□ -1.63
VPS13B-208ENST00000521037 DCXO43602 365 aa4.87□□□□□ -1.63
VPS13B-208ENST00000521037 EFEMP2O95967 443 aa4.87□□□□□ -1.63
VPS13B-208ENST00000521037 CSF2RAP15509 400 aa4.87□□□□□ -1.63
VPS13B-208ENST00000521037 CDK7P50613 346 aa4.87□□□□□ -1.63
VPS13B-208ENST00000521037 SSPNQ14714 243 aa4.87□□□□□ -1.63
VPS13B-208ENST00000521037 SHROOM1Q2M3G4 852 aaPredicted RBP4.87□□□□□ -1.63
VPS13B-208ENST00000521037 LEXMQ3ZCV2 418 aa4.87□□□□□ -1.63
VPS13B-208ENST00000521037 EPHA10Q5JZY3 1008 aa4.87□□□□□ -1.63
VPS13B-208ENST00000521037 DCAF15Q66K64 600 aa4.87□□□□□ -1.63
VPS13B-208ENST00000521037 MFSD5Q6N075 450 aa4.87□□□□□ -1.63
VPS13B-208ENST00000521037 BMP8AQ7Z5Y6 402 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms