RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 ZDBF2Q9HCK1 2354 aa13.02□□□□□ -0.32
MRPS28-206ENST00000520946 C2CD4DB7Z1M9 353 aa13.02□□□□□ -0.33
MRPS28-206ENST00000520946 GPR32O75388 356 aa13.02□□□□□ -0.33
MRPS28-206ENST00000520946 C22orf31O95567 290 aa13.02□□□□□ -0.33
MRPS28-206ENST00000520946 RFX1P22670 979 aa13.02□□□□□ -0.33
MRPS28-206ENST00000520946 CLCN3P51790 818 aa13.02□□□□□ -0.33
MRPS28-206ENST00000520946 SETQ01105 290 aaPredicted RBP13.02□□□□□ -0.33
MRPS28-206ENST00000520946 CREB3L3Q68CJ9 461 aa13.02□□□□□ -0.33
MRPS28-206ENST00000520946 MCTP2Q6DN12 878 aa13.02□□□□□ -0.33
MRPS28-206ENST00000520946 ZNF746Q6NUN9 644 aaPredicted RBP13.02□□□□□ -0.33
MRPS28-206ENST00000520946 ECHDC2Q86YB7 292 aa13.02□□□□□ -0.33
MRPS28-206ENST00000520946 NLRP7Q8WX94 980 aa13.02□□□□□ -0.33
MRPS28-206ENST00000520946 POMKQ9H5K3 350 aa13.02□□□□□ -0.33
MRPS28-206ENST00000520946 LIMD1Q9UGP4 676 aa13.02□□□□□ -0.33
MRPS28-206ENST00000520946 HCFC2Q9Y5Z7 792 aa13.02□□□□□ -0.33
MRPS28-206ENST00000520946 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.01□□□□□ -0.33
MRPS28-206ENST00000520946 CARNS1A5YM72 827 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 C2orf71A6NGG8 1288 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 GOLGA8AA7E2F4 631 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 GOLGA8BA8MQT2 603 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 STK25O00506 426 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 BRD1O95696 1058 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 EOMESO95936 686 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 WEE2P0C1S8 567 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 EIF4BP23588 611 aaKnown RBP13.01□□□□□ -0.33
MRPS28-206ENST00000520946 RNASELQ05823 741 aaKnown RBP13.01□□□□□ -0.33
MRPS28-206ENST00000520946 GIT2Q14161 759 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 ASTLQ6HA08 431 aaPredicted RBP13.01□□□□□ -0.33
MRPS28-206ENST00000520946 LRRC55Q6ZSA7 311 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 CABP7Q86V35 215 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 SGMS1Q86VZ5 419 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 VPS52Q8N1B4 723 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 FLCNQ8NFG4 579 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 HELQQ8TDG4 1101 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 CCDC12Q8WUD4 166 aaPredicted RBP13.01□□□□□ -0.33
MRPS28-206ENST00000520946 ACSF2Q96CM8 615 aaPredicted RBP13.01□□□□□ -0.33
MRPS28-206ENST00000520946 ZNF668Q96K58 619 aaPredicted RBP13.01□□□□□ -0.33
MRPS28-206ENST00000520946 C6orf50Q9HD87 102 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 DZANK1Q9NVP4 752 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 BARHL2Q9NY43 387 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 FBXL21Q9UKT6 434 aa13.01□□□□□ -0.33
MRPS28-206ENST00000520946 FNDC1Q4ZHG4 1894 aaPredicted RBP13.01□□□□□ -0.33
MRPS28-206ENST00000520946 EVPLQ92817 2033 aa13□□□□□ -0.33
MRPS28-206ENST00000520946 CNTNAP5Q8WYK1 1306 aa13□□□□□ -0.33
MRPS28-206ENST00000520946 NT5C1B-RDH14C9J2C7 533 aa13□□□□□ -0.33
MRPS28-206ENST00000520946 FAM86B1E9PN63 330 aa13□□□□□ -0.33
MRPS28-206ENST00000520946 CLASP2O75122 1294 aaKnown RBP13□□□□□ -0.33
MRPS28-206ENST00000520946 ZC3H11AO75152 810 aaKnown RBP eCLIP13□□□□□ -0.33
MRPS28-206ENST00000520946 ASGR2P07307 311 aa13□□□□□ -0.33
MRPS28-206ENST00000520946 FAM86B2P0C5J1 330 aa13□□□□□ -0.33
MRPS28-206ENST00000520946 DNM2P50570 870 aa13□□□□□ -0.33
MRPS28-206ENST00000520946 BCAR1P56945 870 aa13□□□□□ -0.33
MRPS28-206ENST00000520946 AKAP17AQ02040 695 aaKnown RBP13□□□□□ -0.33
MRPS28-206ENST00000520946 TBC1D8BQ0IIM8 1120 aa13□□□□□ -0.33
MRPS28-206ENST00000520946 KCNC3Q14003 757 aa13□□□□□ -0.33
MRPS28-206ENST00000520946 DSC3Q14574 896 aa13□□□□□ -0.33
MRPS28-206ENST00000520946 PRR16Q569H4 304 aa13□□□□□ -0.33
MRPS28-206ENST00000520946 APOA5Q6Q788 366 aa13□□□□□ -0.33
MRPS28-206ENST00000520946 SLC39A11Q8N1S5 342 aa13□□□□□ -0.33
MRPS28-206ENST00000520946 LRRC71Q8N4P6 559 aa13□□□□□ -0.33
MRPS28-206ENST00000520946 NKD2Q969F2 451 aaPredicted RBP13□□□□□ -0.33
MRPS28-206ENST00000520946 GCOM2Q9BZD3 368 aaPredicted RBP13□□□□□ -0.33
MRPS28-206ENST00000520946 CDH22Q9UJ99 828 aa13□□□□□ -0.33
MRPS28-206ENST00000520946 MAFBQ9Y5Q3 323 aaPredicted RBP13□□□□□ -0.33
MRPS28-206ENST00000520946 CCDC196A0A1B0GTZ2 297 aa12.99□□□□□ -0.33
MRPS28-206ENST00000520946 WDR64B1ANS9 1081 aa12.99□□□□□ -0.33
MRPS28-206ENST00000520946 ZBTB42B2RXF5 422 aa12.99□□□□□ -0.33
MRPS28-206ENST00000520946 SKIP12755 728 aa12.99□□□□□ -0.33
MRPS28-206ENST00000520946 ATP4AP20648 1035 aa12.99□□□□□ -0.33
MRPS28-206ENST00000520946 GNA11P29992 359 aa12.99□□□□□ -0.33
MRPS28-206ENST00000520946 CDC42EP1Q00587 391 aa12.99□□□□□ -0.33
MRPS28-206ENST00000520946 TWF2Q6IBS0 349 aaKnown RBP12.99□□□□□ -0.33
MRPS28-206ENST00000520946 TYW1BQ6NUM6 668 aa12.99□□□□□ -0.33
MRPS28-206ENST00000520946 PPFIBP1Q86W92 1011 aa12.99□□□□□ -0.33
MRPS28-206ENST00000520946 ZDHHC14Q8IZN3 488 aa12.99□□□□□ -0.33
MRPS28-206ENST00000520946 C12orf76Q8N812 135 aaPredicted RBP12.99□□□□□ -0.33
MRPS28-206ENST00000520946 KCNG4Q8TDN1 519 aa12.99□□□□□ -0.33
MRPS28-206ENST00000520946 LSG1Q9H089 658 aaKnown RBP12.99□□□□□ -0.33
MRPS28-206ENST00000520946 CYP26B1Q9NR63 512 aa12.99□□□□□ -0.33
MRPS28-206ENST00000520946 PTPRZ1P23471 2315 aaPredicted RBP12.99□□□□□ -0.33
MRPS28-206ENST00000520946 KMT2EQ8IZD2 1858 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 A0A0U1RQF3 1178 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 KLF18A0A0U1RQI7 1052 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 PROB1E7EW31 1015 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 DHX15O43143 795 aaKnown RBP12.98□□□□□ -0.33
MRPS28-206ENST00000520946 CHMP2AO43633 222 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 OATP04181 439 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 CYP3A4P08684 503 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 DARSP14868 501 aaKnown RBP12.98□□□□□ -0.33
MRPS28-206ENST00000520946 FGFR4P22455 802 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 SFPQP23246 707 aaKnown RBP eCLIP12.98□□□□□ -0.33
MRPS28-206ENST00000520946 CLCN5P51795 746 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 CLLU1OSQ5K130 101 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 ELMSAN1Q6PJG2 1045 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 GLB1LQ6UWU2 654 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 TMC5Q6UXY8 1006 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 OTOP3Q7RTS5 596 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 ASCL5Q7RTU5 278 aa12.98□□□□□ -0.33
MRPS28-206ENST00000520946 REXO1Q8N1G1 1221 aaKnown RBP12.98□□□□□ -0.33
MRPS28-206ENST00000520946 TMEM105Q8N8V8 129 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms