RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 CFAP73A6NFT4 308 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 HIP1RO75146 1068 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 AKAP3O75969 853 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 GHRP10912 638 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 CYP11B2P19099 503 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 PPP2R5EQ16537 467 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 COBLL1Q53SF7 1204 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 BARGINQ6ZT62 677 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 LRRC57Q8N9N7 239 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 RBM46Q8TBY0 533 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 METTL14Q9HCE5 456 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 COL1A1P02452 1464 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 TRIM49P0CI25 452 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 TRIM49CP0CI26 452 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 MMP14P50281 582 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 DDB1Q16531 1140 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 EMC10Q5UCC4 262 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 ARHGAP27Q6ZUM4 889 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 DHX36Q9H2U1 1008 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.85□□□□□ -0.191e-6■■■■□ 26.4
TRAPPC9-208ENST00000520857 H0Y3Z8 333 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 MGRN1O60291 552 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 NQO1P15559 274 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 ALDH5A1P51649 535 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 ZCWPW2Q504Y3 356 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 LACTB2Q53H82 288 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 CCDC137Q6PK04 289 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 NEDD1Q8NHV4 660 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 TRPC6Q9Y210 931 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 C15orf41Q9Y2V0 281 aa13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 USP15Q9Y4E8 981 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC9-208ENST00000520857 RSPH10B2B2RC85 870 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 RSPH10BP0C881 870 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 GJC1P36383 396 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 USH1GQ495M9 461 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 PPP4R3CPQ6ZMV5 832 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 EIF1ADQ8N9N8 165 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 FBF1Q8TES7 1133 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 THAP2Q9H0W7 228 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 ERVK-5Q9HDB9 667 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 SPATS2LQ9NUQ6 558 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 FRMD4BQ9Y2L6 1034 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 PPIP5K2O43314 1243 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 AGTP01019 485 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 SATB1Q01826 763 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 SETDB1Q15047 1291 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 GRIK5Q16478 980 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 CCHCR1Q8TD31 782 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 RNF25Q96BH1 459 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 KIF9Q9HAQ2 790 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 ETNK1Q9HBU6 452 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 PARP2Q9UGN5 583 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 TMEM120BA0PK00 339 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 C5orf60A6NFR6 353 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 A8MUI8 341 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 CES2O00748 559 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 EXOC3O60645 756 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 MYBL1P10243 752 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 SESN3P58005 492 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 MAPK7Q13164 816 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 ITPK1Q13572 414 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 TMEM119Q4V9L6 283 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 ZNF804AQ7Z570 1209 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 FRMD5Q7Z6J6 570 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 CROCCP2Q86T23 111 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 SPICE1Q8N0Z3 855 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 ARMC2Q8NEN0 867 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 REEP2Q9BRK0 252 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 MTFR1LQ9H019 292 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 SLAIN2Q9P270 581 aa13.84□□□□□ -0.19
TRAPPC9-208ENST00000520857 NUP188Q5SRE5 1749 aa13.83□□□□□ -0.19
TRAPPC9-208ENST00000520857 COL5A2P05997 1499 aaPredicted RBP13.83□□□□□ -0.19
TRAPPC9-208ENST00000520857 USP17L10C9JJH3 530 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 PTENP60484 403 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 PIGOQ8TEQ8 1089 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 SAAL1Q96ER3 474 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 LBHD1Q9BQE6 289 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 TRIM33Q9UPN9 1127 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 PCDHA1Q9Y5I3 950 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 FAM187AA6NFU0 413 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 PPFIA2O75334 1257 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 MED24O75448 989 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 UPP2O95045 317 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 SNAP25P60880 206 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 PSMC6P62333 389 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 EDRF1Q3B7T1 1238 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 CAPN12Q6ZSI9 719 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 SRRM1Q8IYB3 904 aaKnown RBP13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 IKZF4Q9H2S9 585 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 ALG6Q9Y672 507 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 FOXO6A8MYZ6 492 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 THAP12O43422 761 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 PDHA1P08559 390 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 RFC4P35249 363 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 SOX5P35711 763 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 KCNA1Q09470 495 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 BIRC2Q13490 618 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 ITIH4Q14624 930 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 ZNF449Q6P9G9 518 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 TPTE2Q6XPS3 522 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms