RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 HCSTQ9UBK5 93 aa22.14■■□□□ 1.13
PABPC1-215ENST00000520804 CD207Q9UJ71 328 aa22.14■■□□□ 1.13
PABPC1-215ENST00000520804 ZSCAN20P17040 1043 aaPredicted RBP22.13■■□□□ 1.13
PABPC1-215ENST00000520804 NRIP1P48552 1158 aa22.13■■□□□ 1.13
PABPC1-215ENST00000520804 TBC1D8BQ0IIM8 1120 aa22.13■■□□□ 1.13
PABPC1-215ENST00000520804 CSPP1Q1MSJ5 1256 aa22.13■■□□□ 1.13
PABPC1-215ENST00000520804 COLGALT1Q8NBJ5 622 aa22.13■■□□□ 1.13
PABPC1-215ENST00000520804 ETNPPLQ8TBG4 499 aa22.13■■□□□ 1.13
PABPC1-215ENST00000520804 ZNF668Q96K58 619 aaPredicted RBP22.13■■□□□ 1.13
PABPC1-215ENST00000520804 MSLNLQ96KJ4 702 aa22.13■■□□□ 1.13
PABPC1-215ENST00000520804 NIFKQ9BYG3 293 aaKnown RBP22.13■■□□□ 1.13
PABPC1-215ENST00000520804 CWH43Q9H720 699 aa22.13■■□□□ 1.13
PABPC1-215ENST00000520804 HCN4Q9Y3Q4 1203 aa22.13■■□□□ 1.13
PABPC1-215ENST00000520804 PCDHGC5Q9Y5F6 944 aa22.13■■□□□ 1.13
PABPC1-215ENST00000520804 FGF18O76093 207 aa22.12■■□□□ 1.13
PABPC1-215ENST00000520804 STBD1O95210 358 aa22.12■■□□□ 1.13
PABPC1-215ENST00000520804 DARSP14868 501 aaKnown RBP22.12■■□□□ 1.13
PABPC1-215ENST00000520804 LAG3P18627 525 aa22.12■■□□□ 1.13
PABPC1-215ENST00000520804 PLA2G5P39877 138 aa22.12■■□□□ 1.13
PABPC1-215ENST00000520804 NONOQ15233 471 aaKnown RBP eCLIP22.12■■□□□ 1.13
PABPC1-215ENST00000520804 XKR3Q5GH77 459 aa22.12■■□□□ 1.13
PABPC1-215ENST00000520804 TMEM117Q9H0C3 514 aa22.12■■□□□ 1.13
PABPC1-215ENST00000520804 TLR9Q9NR96 1032 aa22.12■■□□□ 1.13
PABPC1-215ENST00000520804 RNF19AQ9NV58 838 aa22.12■■□□□ 1.13
PABPC1-215ENST00000520804 CLEC1BQ9P126 229 aa22.12■■□□□ 1.13
PABPC1-215ENST00000520804 SEPT9Q9UHD8 586 aaPredicted RBP22.12■■□□□ 1.13
PABPC1-215ENST00000520804 ARIH1Q9Y4X5 557 aaPredicted RBP22.12■■□□□ 1.13
PABPC1-215ENST00000520804 HOXA2O43364 376 aa22.11■■□□□ 1.13
PABPC1-215ENST00000520804 DCXO43602 365 aa22.11■■□□□ 1.13
PABPC1-215ENST00000520804 EYA4O95677 639 aa22.11■■□□□ 1.13
PABPC1-215ENST00000520804 DRP2Q13474 957 aa22.11■■□□□ 1.13
PABPC1-215ENST00000520804 RBM23Q86U06 439 aaKnown RBP22.11■■□□□ 1.13
PABPC1-215ENST00000520804 ECHDC2Q86YB7 292 aa22.11■■□□□ 1.13
PABPC1-215ENST00000520804 THNSL1Q8IYQ7 743 aa22.11■■□□□ 1.13
PABPC1-215ENST00000520804 MICAL1Q8TDZ2 1067 aa22.11■■□□□ 1.13
PABPC1-215ENST00000520804 FAM122AQ96E09 287 aa22.11■■□□□ 1.13
PABPC1-215ENST00000520804 CASD1Q96PB1 797 aa22.11■■□□□ 1.13
PABPC1-215ENST00000520804 CEP89Q96ST8 783 aa22.11■■□□□ 1.13
PABPC1-215ENST00000520804 POP1Q99575 1024 aaKnown RBP22.11■■□□□ 1.13
PABPC1-215ENST00000520804 DDX25Q9UHL0 483 aaKnown RBP22.11■■□□□ 1.13
PABPC1-215ENST00000520804 PRR33A8MZF0 331 aa22.1■■□□□ 1.13
PABPC1-215ENST00000520804 CDKL5O76039 1030 aa22.1■■□□□ 1.13
PABPC1-215ENST00000520804 GLP2RO95838 553 aa22.1■■□□□ 1.13
PABPC1-215ENST00000520804 SCRN1Q12765 414 aa22.1■■□□□ 1.13
PABPC1-215ENST00000520804 COASYQ13057 564 aa22.1■■□□□ 1.13
PABPC1-215ENST00000520804 INF2Q27J81 1249 aa22.1■■□□□ 1.13
PABPC1-215ENST00000520804 MTERF2Q49AM1 385 aa22.1■■□□□ 1.13
PABPC1-215ENST00000520804 LRRC55Q6ZSA7 311 aa22.1■■□□□ 1.13
PABPC1-215ENST00000520804 KRT25Q7Z3Z0 450 aa22.1■■□□□ 1.13
PABPC1-215ENST00000520804 NLRP7Q8WX94 980 aa22.1■■□□□ 1.13
PABPC1-215ENST00000520804 SCLT1Q96NL6 688 aa22.1■■□□□ 1.13
PABPC1-215ENST00000520804 PHF20Q9BVI0 1012 aa22.1■■□□□ 1.13
PABPC1-215ENST00000520804 TLE6Q9H808 572 aa22.1■■□□□ 1.13
PABPC1-215ENST00000520804 KCNJ14Q9UNX9 436 aa22.1■■□□□ 1.13
PABPC1-215ENST00000520804 IGKV6-21A0A0C4DH24 114 aa22.09■■□□□ 1.13
PABPC1-215ENST00000520804 TMEM150BA6NC51 233 aa22.09■■□□□ 1.13
PABPC1-215ENST00000520804 SLC37A4O43826 429 aa22.09■■□□□ 1.13
PABPC1-215ENST00000520804 FGFR4P22455 802 aa22.09■■□□□ 1.13
PABPC1-215ENST00000520804 ERVFC1P60507 584 aa22.09■■□□□ 1.13
PABPC1-215ENST00000520804 CDC42EP1Q00587 391 aa22.09■■□□□ 1.13
PABPC1-215ENST00000520804 PLCB3Q01970 1234 aa22.09■■□□□ 1.13
PABPC1-215ENST00000520804 PDE12Q6L8Q7 609 aaKnown RBP22.09■■□□□ 1.13
PABPC1-215ENST00000520804 ABI1Q8IZP0 508 aa22.09■■□□□ 1.13
PABPC1-215ENST00000520804 LRRC43Q8N309 656 aa22.09■■□□□ 1.13
PABPC1-215ENST00000520804 SMRP1Q8NCR6 262 aa22.09■■□□□ 1.13
PABPC1-215ENST00000520804 LZTS1Q9Y250 596 aa22.09■■□□□ 1.13
PABPC1-215ENST00000520804 STK36Q9NRP7 1315 aa22.08■■□□□ 1.13
PABPC1-215ENST00000520804 A0A0U1RQF3 1178 aa22.08■■□□□ 1.13
PABPC1-215ENST00000520804 FSCN2O14926 492 aa22.08■■□□□ 1.13
PABPC1-215ENST00000520804 LETM2Q2VYF4 491 aa22.08■■□□□ 1.13
PABPC1-215ENST00000520804 MRPS27Q92552 414 aaKnown RBP22.08■■□□□ 1.13
PABPC1-215ENST00000520804 SH2D3AQ9BRG2 576 aa22.08■■□□□ 1.13
PABPC1-215ENST00000520804 GCOM2Q9BZD3 368 aaPredicted RBP22.08■■□□□ 1.13
PABPC1-215ENST00000520804 SLKQ9H2G2 1235 aaPredicted RBP22.08■■□□□ 1.13
PABPC1-215ENST00000520804 BARX2Q9UMQ3 279 aaPredicted RBP22.08■■□□□ 1.13
PABPC1-215ENST00000520804 CCDC194A0A1B0GVG4 234 aa22.07■■□□□ 1.12
PABPC1-215ENST00000520804 PER2O15055 1255 aa22.07■■□□□ 1.12
PABPC1-215ENST00000520804 DNM2P50570 870 aa22.07■■□□□ 1.12
PABPC1-215ENST00000520804 PSMC5P62195 406 aa22.07■■□□□ 1.12
PABPC1-215ENST00000520804 DUSP6Q16828 381 aa22.07■■□□□ 1.12
PABPC1-215ENST00000520804 CLLU1OSQ5K130 101 aa22.07■■□□□ 1.12
PABPC1-215ENST00000520804 KCNT2Q6UVM3 1135 aa22.07■■□□□ 1.12
PABPC1-215ENST00000520804 ZNF598Q86UK7 904 aaKnown RBP22.07■■□□□ 1.12
PABPC1-215ENST00000520804 RNF169Q8NCN4 708 aa22.07■■□□□ 1.12
PABPC1-215ENST00000520804 CDCA3Q99618 268 aaPredicted RBP22.07■■□□□ 1.12
PABPC1-215ENST00000520804 DACT1Q9NYF0 836 aa22.07■■□□□ 1.12
PABPC1-215ENST00000520804 PUF60Q9UHX1 559 aaKnown RBP22.07■■□□□ 1.12
PABPC1-215ENST00000520804 TPCN1Q9ULQ1 816 aa22.07■■□□□ 1.12
PABPC1-215ENST00000520804 FSD2A1L4K1 749 aa22.06■■□□□ 1.12
PABPC1-215ENST00000520804 DDX11L8A8MPP1 907 aa22.06■■□□□ 1.12
PABPC1-215ENST00000520804 EML1O00423 815 aa22.06■■□□□ 1.12
PABPC1-215ENST00000520804 PFKFB2O60825 505 aa22.06■■□□□ 1.12
PABPC1-215ENST00000520804 MAFO75444 373 aaPredicted RBP22.06■■□□□ 1.12
PABPC1-215ENST00000520804 CSDE1O75534 798 aaKnown RBP22.06■■□□□ 1.12
PABPC1-215ENST00000520804 EOMESO95936 686 aa22.06■■□□□ 1.12
PABPC1-215ENST00000520804 XBP1P17861 261 aa22.06■■□□□ 1.12
PABPC1-215ENST00000520804 PPP2R5CQ13362 524 aa22.06■■□□□ 1.12
PABPC1-215ENST00000520804 PPP4R3AQ6IN85 833 aa22.06■■□□□ 1.12
PABPC1-215ENST00000520804 ANO5Q75V66 913 aa22.06■■□□□ 1.12
PABPC1-215ENST00000520804 NEK8Q86SG6 692 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms