RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 ST3GAL1Q11201 340 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 INF2Q27J81 1249 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 DPCR1Q3MIW9 517 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 AGBL2Q5U5Z8 902 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 ANO7Q6IWH7 933 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 GET4Q7L5D6 327 aaPredicted RBP9.41□□□□□ -0.9
SHPRH-208ENST00000520752 ZNF554Q86TJ5 538 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 PPFIBP1Q86W92 1011 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 CNGA4Q8IV77 575 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 IQCKQ8N0W5 287 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 KCNG4Q8TDN1 519 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 PTPRN2Q92932 1015 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 AZIN2Q96A70 460 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 DHTKD1Q96HY7 919 aaPredicted RBP9.41□□□□□ -0.9
SHPRH-208ENST00000520752 CATSPER2Q96P56 530 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 NRSN2Q9GZP1 204 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 TAF1DQ9H5J8 278 aaPredicted RBP9.41□□□□□ -0.9
SHPRH-208ENST00000520752 CNOT10Q9H9A5 744 aaKnown RBP9.41□□□□□ -0.9
SHPRH-208ENST00000520752 PREBQ9HCU5 417 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 DDX21Q9NR30 783 aaKnown RBP eCLIP9.41□□□□□ -0.9
SHPRH-208ENST00000520752 RMND1Q9NWS8 449 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 IL1RAPL1Q9NZN1 696 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 MAPK8IP1Q9UQF2 711 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 LEMD3Q9Y2U8 911 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 L3MBTL1Q9Y468 752 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 SAR1BQ9Y6B6 198 aa9.41□□□□□ -0.9
SHPRH-208ENST00000520752 COL3A1P02461 1466 aaPredicted RBP9.4□□□□□ -0.9
SHPRH-208ENST00000520752 JCADQ9P266 1359 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 ITIH6Q6UXX5 1313 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 H3BQV1 296 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 LARGE1O95461 756 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 YEATS4O95619 227 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 CLTAP09496 248 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 PRLRP16471 622 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 NME2P22392 152 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 PCK1P35558 622 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 ZNF76P36508 570 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 STAT6P42226 847 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 CD97P48960 835 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 AP3B2Q13367 1082 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 LSAMPQ13449 338 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 MTX1Q13505 466 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 TRIM14Q14142 442 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 MAP7Q14244 749 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 ADRM1Q16186 407 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 WDR78Q5VTH9 848 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 KLC3Q6P597 504 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 RUFY4Q6ZNE9 571 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 FERMT3Q86UX7 667 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 ALYREFQ86V81 257 aaKnown RBP9.4□□□□□ -0.9
SHPRH-208ENST00000520752 CNTROBQ8N137 903 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 IFT81Q8WYA0 676 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 ARL8AQ96BM9 186 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 RAB3IPQ96QF0 476 aaPredicted RBP9.4□□□□□ -0.9
SHPRH-208ENST00000520752 HAPLN3Q96S86 360 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 CGREF1Q99674 301 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 TRIM56Q9BRZ2 755 aaKnown RBP9.4□□□□□ -0.9
SHPRH-208ENST00000520752 HSD3B7Q9H2F3 369 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 HAUS4Q9H6D7 363 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 ATP8A2Q9NTI2 1148 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 EXOC1Q9NV70 894 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 MIS18AQ9NYP9 233 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.4□□□□□ -0.9
SHPRH-208ENST00000520752 NDUFA13Q9P0J0 144 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 TTLL3Q9Y4R7 772 aa9.4□□□□□ -0.9
SHPRH-208ENST00000520752 CARMIL2Q6F5E8 1435 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 CRYBG1Q9Y4K1 1723 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 SLC27A2O14975 620 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 ORC4O43929 436 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 ZBED4O75132 1171 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 RAB11FIP3O75154 756 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 LMNAP02545 664 aaKnown RBP9.39□□□□□ -0.91
SHPRH-208ENST00000520752 CYP11A1P05108 521 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 CELA3AP09093 270 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 SPATA31C1P0DKV0 1188 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 ALOX15P16050 662 aaPredicted RBP9.39□□□□□ -0.91
SHPRH-208ENST00000520752 COL8A1P27658 744 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 SKIV2L2P42285 1042 aaKnown RBP9.39□□□□□ -0.91
SHPRH-208ENST00000520752 CCT8P50990 548 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 POLE2P56282 527 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 ATP8B2P98198 1209 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 PDE1BQ01064 536 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 ITGB3BPQ13352 177 aaPredicted RBP9.39□□□□□ -0.91
SHPRH-208ENST00000520752 CCDC153Q494R4 210 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 THOC7Q6I9Y2 204 aaKnown RBP9.39□□□□□ -0.91
SHPRH-208ENST00000520752 OR52E8Q6IFG1 317 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 IGF2-ASQ6U949 168 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 CCDC129Q6ZRS4 1044 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 CATIPQ7Z7H3 387 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 PEX5LQ8IYB4 626 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 PDILTQ8N807 584 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 TRPC4APQ8TEL6 797 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 ATP8B4Q8TF62 1192 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 WDR60Q8WVS4 1066 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 RILPL2Q969X0 211 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 ZMAT2Q96NC0 199 aaKnown RBP9.39□□□□□ -0.91
SHPRH-208ENST00000520752 CDC5LQ99459 802 aaKnown RBP9.39□□□□□ -0.91
SHPRH-208ENST00000520752 SLF1Q9BQI6 1058 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.39□□□□□ -0.912e-7■■□□□ 14.2
SHPRH-208ENST00000520752 RSRP1Q9BUV0 290 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms