RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 TPM4P67936 248 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 IRX5P78411 483 aaPredicted RBP9.89□□□□□ -0.83
CSMD1-208ENST00000520561 MYL5Q02045 173 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 STK4Q13043 487 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 PKN2Q16513 984 aaKnown RBP9.89□□□□□ -0.83
CSMD1-208ENST00000520561 CXCL17Q6UXB2 119 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 GAS2L3Q86XJ1 694 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 MYOCDQ8IZQ8 938 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 DAW1Q8N136 415 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 ADSSL1Q8N142 457 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 GUF1Q8N442 669 aaKnown RBP9.89□□□□□ -0.83
CSMD1-208ENST00000520561 AOPEPQ8N6M6 819 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 RNF214Q8ND24 703 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 KLHDC9Q8NEP7 349 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 TRAPPC12Q8WVT3 735 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 PSPC1Q8WXF1 523 aaKnown RBP9.89□□□□□ -0.83
CSMD1-208ENST00000520561 KAT2BQ92831 832 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 HPS3Q969F9 1004 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 TMEM143Q96AN5 459 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 CEP89Q96ST8 783 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 UNC93B1Q9H1C4 597 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 CBX8Q9HC52 389 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 GPRC5CQ9NQ84 441 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 KCNG1Q9UIX4 513 aa9.89□□□□□ -0.83
CSMD1-208ENST00000520561 BICDL2A1A5D9 508 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 CCDC169A6NNP5 214 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 SFI1A8K8P3 1242 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 ZBTB42B2RXF5 422 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 KBTBD13C9JR72 458 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 ASGR1P07306 291 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 MYBP10242 640 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 CCL5P13501 91 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 CD44P16070 742 aaKnown RBP9.88□□□□□ -0.83
CSMD1-208ENST00000520561 TMOD1P28289 359 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 ABCD1P33897 745 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 PRCPP42785 496 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 PEX3P56589 373 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 LRRC41Q15345 812 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 KCNA10Q16322 511 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 TPD52L1Q16890 204 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-208ENST00000520561 IER5Q5VY09 327 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 EFCAB12Q6NXP0 572 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 MTHFD1LQ6UB35 978 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 LRRC71Q8N4P6 559 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 METTL13Q8N6R0 699 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 C7orf31Q8N865 590 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 ARRDC4Q8NCT1 418 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 LMBR1Q8WVP7 490 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 SPIRE2Q8WWL2 714 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 NELFBQ8WX92 580 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 HVCN1Q96D96 273 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 DHTKD1Q96HY7 919 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-208ENST00000520561 MAP7D2Q96T17 732 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 TSG101Q99816 390 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 TSEN34Q9BSV6 310 aaKnown RBP9.88□□□□□ -0.83
CSMD1-208ENST00000520561 RBSNQ9H1K0 784 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 SUGCTQ9HAC7 445 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 POLD4Q9HCU8 107 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 KMT5AQ9NQR1 393 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 PDLIM7Q9NR12 457 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 RWDD2AQ9UIY3 292 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 MAPK8IP1Q9UQF2 711 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 PCDHB13Q9Y5F0 798 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 PCDHA2Q9Y5H9 948 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 MYH11P35749 1972 aa9.88□□□□□ -0.83
CSMD1-208ENST00000520561 PHLPP2Q6ZVD8 1323 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 IGKV6-21A0A0C4DH24 114 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 C17orf102A2RUQ5 167 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 LRRIQ4A6NIV6 560 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 PPP1R3GB7ZBB8 358 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 IKBKBO14920 756 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 SCP2P22307 547 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 CCNE1P24864 410 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 KLRC1P26715 233 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 NMT1P30419 496 aaKnown RBP9.87□□□□□ -0.83
CSMD1-208ENST00000520561 ARL2P36404 184 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 NAMPTP43490 491 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 NPTX2P47972 431 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 CLCN3P51790 818 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 NCKAP1LP55160 1127 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 SOX10P56693 466 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 STX17P56962 302 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 TFDP1Q14186 410 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 MXD4Q14582 209 aaPredicted RBP9.87□□□□□ -0.83
CSMD1-208ENST00000520561 BMT2Q1RMZ1 405 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 FAM47CQ5HY64 1035 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 LHX8Q68G74 356 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 NFRKBQ6P4R8 1299 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 LUZP1Q86V48 1076 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 NELFCDQ8IXH7 590 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 DEPTORQ8TB45 409 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 ENOX1Q8TC92 643 aaKnown RBP9.87□□□□□ -0.83
CSMD1-208ENST00000520561 ASAP3Q8TDY4 903 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 BSNDQ8WZ55 320 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 P2RX5Q93086 422 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 GLT1D1Q96MS3 346 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 FGFBP2Q9BYJ0 223 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 RNF208Q9H0X6 261 aa9.87□□□□□ -0.83
CSMD1-208ENST00000520561 PAK6Q9NQU5 681 aaPredicted RBP9.87□□□□□ -0.83
CSMD1-208ENST00000520561 SETD4Q9NVD3 440 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms