RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 ADCY5O95622 1261 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 F2P00734 622 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 MAPTP10636 758 aaKnown RBP9.42□□□□□ -0.9
VAPB-206ENST00000520497 PLS3P13797 630 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 MARK3P27448 753 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 CCND3P30281 292 aaPredicted RBP9.42□□□□□ -0.9
VAPB-206ENST00000520497 RFC5P40937 340 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 CPT1AP50416 773 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 CASP5P51878 434 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 GJA9P57773 515 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 RTP1P59025 263 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 PAK1Q13153 545 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 EMC2Q15006 297 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 TPD52L1Q16890 204 aaPredicted RBP9.42□□□□□ -0.9
VAPB-206ENST00000520497 BMT2Q1RMZ1 405 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 HS1BP3Q53T59 392 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 PRPF38BQ5VTL8 546 aaKnown RBP9.42□□□□□ -0.9
VAPB-206ENST00000520497 KLHL10Q6JEL2 608 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 TTI2Q6NXR4 508 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 SARM1Q6SZW1 724 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 TRMT1LQ7Z2T5 733 aaKnown RBP9.42□□□□□ -0.9
VAPB-206ENST00000520497 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.42□□□□□ -0.9
VAPB-206ENST00000520497 SLAIN1Q8ND83 568 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 ANKRD20A12PQ8NF67 263 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 RAET1EQ8TD07 263 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 NELFBQ8WX92 580 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 KAT2BQ92831 832 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 KIFAP3Q92845 792 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 ARMC5Q96C12 935 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 DHTKD1Q96HY7 919 aaPredicted RBP9.42□□□□□ -0.9
VAPB-206ENST00000520497 STRA6Q9BX79 667 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 TRIM5Q9C035 493 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 RNPEPQ9H4A4 650 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 C17orf75Q9HAS0 396 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 POLD4Q9HCU8 107 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 GPRC5CQ9NQ84 441 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 TBC1D7Q9P0N9 293 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 ZNF215Q9UL58 517 aaPredicted RBP9.42□□□□□ -0.9
VAPB-206ENST00000520497 CTNND2Q9UQB3 1225 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 MAPK8IP1Q9UQF2 711 aa9.42□□□□□ -0.9
VAPB-206ENST00000520497 PDCD11Q14690 1871 aaKnown RBP9.42□□□□□ -0.9
VAPB-206ENST00000520497 ZMYM2Q9UBW7 1377 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 UBE4BO95155 1302 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 H3BRB1 525 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 HAS3O00219 553 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 EIF3DO15371 548 aaKnown RBP eCLIP9.41□□□□□ -0.9
VAPB-206ENST00000520497 GAS2O43903 313 aaKnown RBP9.41□□□□□ -0.9
VAPB-206ENST00000520497 MAFO75444 373 aaPredicted RBP9.41□□□□□ -0.9
VAPB-206ENST00000520497 ZNF18P17022 549 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 CCNE1P24864 410 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 HOXD13P35453 343 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 POLGP54098 1239 aaPredicted RBP9.41□□□□□ -0.9
VAPB-206ENST00000520497 PMS1P54277 932 aaKnown RBP9.41□□□□□ -0.9
VAPB-206ENST00000520497 NCKAP1LP55160 1127 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 IRX5P78411 483 aaPredicted RBP9.41□□□□□ -0.9
VAPB-206ENST00000520497 LRRC41Q15345 812 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 FSCN1Q16658 493 aaKnown RBP9.41□□□□□ -0.9
VAPB-206ENST00000520497 ZCWPW2Q504Y3 356 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 ODR4Q5SWX8 454 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 CENPPQ6IPU0 288 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 ZNF720Q7Z2F6 126 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 DRC7Q8IY82 874 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 EXOC8Q8IYI6 725 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 MYOCDQ8IZQ8 938 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 MYCT1Q8N699 235 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 LINC01465Q8N7H1 131 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 ZNF507Q8TCN5 953 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 SCFD1Q8WVM8 642 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 SLC7A3Q8WY07 619 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 BSNDQ8WZ55 320 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 KCNN1Q92952 543 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 P2RX5Q93086 422 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 ZNF333Q96JL9 665 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 PDLIM2Q96JY6 352 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 AP5M1Q9H0R1 490 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 KCTD10Q9H3F6 313 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 ST6GALNAC4Q9H4F1 302 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 ZHX3Q9H4I2 956 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 TUT1Q9H6E5 874 aaKnown RBP9.41□□□□□ -0.9
VAPB-206ENST00000520497 MRPL44Q9H9J2 332 aaKnown RBP9.41□□□□□ -0.9
VAPB-206ENST00000520497 LARSQ9P2J5 1176 aaKnown RBP9.41□□□□□ -0.9
VAPB-206ENST00000520497 TRPC6Q9Y210 931 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 BRCA2P51587 3418 aa9.41□□□□□ -0.9
VAPB-206ENST00000520497 RALGAPA2Q2PPJ7 1873 aa9.4□□□□□ -0.9
VAPB-206ENST00000520497 BICDL2A1A5D9 508 aa9.4□□□□□ -0.9
VAPB-206ENST00000520497 TRIM49BA6NDI0 452 aa9.4□□□□□ -0.9
VAPB-206ENST00000520497 MYADML2A6NDP7 307 aa9.4□□□□□ -0.9
VAPB-206ENST00000520497 AP5Z1O43299 807 aa9.4□□□□□ -0.9
VAPB-206ENST00000520497 ADAMTS4O75173 837 aa9.4□□□□□ -0.9
VAPB-206ENST00000520497 KIF20AO95235 890 aa9.4□□□□□ -0.9
VAPB-206ENST00000520497 C22orf31O95567 290 aa9.4□□□□□ -0.9
VAPB-206ENST00000520497 INHAP05111 366 aa9.4□□□□□ -0.9
VAPB-206ENST00000520497 MYBP10242 640 aa9.4□□□□□ -0.9
VAPB-206ENST00000520497 RARBP10826 455 aa9.4□□□□□ -0.9
VAPB-206ENST00000520497 INSRRP14616 1297 aa9.4□□□□□ -0.9
VAPB-206ENST00000520497 CST5P28325 142 aaPredicted RBP9.4□□□□□ -0.9
VAPB-206ENST00000520497 CDC25BP30305 580 aa9.4□□□□□ -0.9
VAPB-206ENST00000520497 NMT1P30419 496 aaKnown RBP9.4□□□□□ -0.9
VAPB-206ENST00000520497 GRK4P32298 578 aa9.4□□□□□ -0.9
VAPB-206ENST00000520497 ARL2P36404 184 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms