RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 CRIP3Q6Q6R5 217 aa6.35□□□□□ -1.39
SKP1-207ENST00000520417 Q6ZSN1 163 aa6.35□□□□□ -1.39
SKP1-207ENST00000520417 C1orf210Q8IVY1 113 aa6.35□□□□□ -1.39
SKP1-207ENST00000520417 OR5AN1Q8NGI8 311 aa6.35□□□□□ -1.39
SKP1-207ENST00000520417 RPGRQ92834 1020 aaKnown RBP6.35□□□□□ -1.39
SKP1-207ENST00000520417 NELFAQ9H3P2 528 aa6.35□□□□□ -1.39
SKP1-207ENST00000520417 MAGEC2Q9UBF1 373 aaPredicted RBP6.35□□□□□ -1.39
SKP1-207ENST00000520417 CAPN14A8MX76 684 aa6.34□□□□□ -1.39
SKP1-207ENST00000520417 CBX4O00257 560 aa6.34□□□□□ -1.39
SKP1-207ENST00000520417 GAS7O60861 476 aa6.34□□□□□ -1.39
SKP1-207ENST00000520417 SESN2P58004 480 aaPredicted RBP6.34□□□□□ -1.39
SKP1-207ENST00000520417 ANTXR2P58335 489 aa6.34□□□□□ -1.39
SKP1-207ENST00000520417 HGFACQ04756 655 aa6.34□□□□□ -1.39
SKP1-207ENST00000520417 DUSP8Q13202 625 aa6.34□□□□□ -1.39
SKP1-207ENST00000520417 RIN1Q13671 783 aa6.34□□□□□ -1.39
SKP1-207ENST00000520417 TCEA2Q15560 299 aa6.34□□□□□ -1.39
SKP1-207ENST00000520417 KRT40Q6A162 431 aa6.34□□□□□ -1.39
SKP1-207ENST00000520417 RNF207Q6ZRF8 634 aa6.34□□□□□ -1.39
SKP1-207ENST00000520417 HOMER1Q86YM7 354 aa6.34□□□□□ -1.39
SKP1-207ENST00000520417 BCL6BQ8N143 479 aaPredicted RBP6.34□□□□□ -1.39
SKP1-207ENST00000520417 Q8N1X5 172 aa6.34□□□□□ -1.39
SKP1-207ENST00000520417 C7orf31Q8N865 590 aa6.34□□□□□ -1.39
SKP1-207ENST00000520417 GFM2Q969S9 779 aaKnown RBP6.34□□□□□ -1.39
SKP1-207ENST00000520417 DYDC2Q96IM9 177 aa6.34□□□□□ -1.39
SKP1-207ENST00000520417 ELF4Q99607 663 aaPredicted RBP6.34□□□□□ -1.39
SKP1-207ENST00000520417 H2AFY2Q9P0M6 372 aaPredicted RBP6.34□□□□□ -1.39
SKP1-207ENST00000520417 DNAI1Q9UI46 699 aa6.34□□□□□ -1.39
SKP1-207ENST00000520417 VWA7Q9Y334 891 aa6.34□□□□□ -1.39
SKP1-207ENST00000520417 NPIPB8E9PQR5 432 aa6.33□□□□□ -1.4
SKP1-207ENST00000520417 BPIFB4P59827 614 aa6.33□□□□□ -1.4
SKP1-207ENST00000520417 FOXE3Q13461 319 aa6.33□□□□□ -1.4
SKP1-207ENST00000520417 TIGD7Q6NT04 549 aaPredicted RBP6.33□□□□□ -1.4
SKP1-207ENST00000520417 NME9Q86XW9 330 aa6.33□□□□□ -1.4
SKP1-207ENST00000520417 NXPE1Q8N323 547 aa6.33□□□□□ -1.4
SKP1-207ENST00000520417 ANKRD53Q8N9V6 530 aa6.33□□□□□ -1.4
SKP1-207ENST00000520417 SLC7A6OSQ96CW6 309 aaPredicted RBP6.33□□□□□ -1.4
SKP1-207ENST00000520417 C16orf92Q96LL3 132 aa6.33□□□□□ -1.4
SKP1-207ENST00000520417 RNPC3Q96LT9 517 aaKnown RBP6.33□□□□□ -1.4
SKP1-207ENST00000520417 AGO3Q9H9G7 860 aaKnown RBP6.33□□□□□ -1.4
SKP1-207ENST00000520417 FANCLQ9NW38 375 aa6.33□□□□□ -1.4
SKP1-207ENST00000520417 OXSMQ9NWU1 459 aa6.33□□□□□ -1.4
SKP1-207ENST00000520417 NCDNQ9UBB6 729 aa6.33□□□□□ -1.4
SKP1-207ENST00000520417 CTDP1Q9Y5B0 961 aaPredicted RBP6.33□□□□□ -1.4
SKP1-207ENST00000520417 RFPL3O75679 317 aa6.32□□□□□ -1.4
SKP1-207ENST00000520417 DGCR2P98153 550 aa6.32□□□□□ -1.4
SKP1-207ENST00000520417 ADCY2Q08462 1091 aa6.32□□□□□ -1.4
SKP1-207ENST00000520417 CRHR2Q13324 411 aa6.32□□□□□ -1.4
SKP1-207ENST00000520417 TCIRG1Q13488 830 aa6.32□□□□□ -1.4
SKP1-207ENST00000520417 MAMDC4Q6UXC1 1216 aa6.32□□□□□ -1.4
SKP1-207ENST00000520417 RTF1Q92541 710 aaKnown RBP6.32□□□□□ -1.4
SKP1-207ENST00000520417 APPBP2Q92624 585 aa6.32□□□□□ -1.4
SKP1-207ENST00000520417 PLEKHG4BQ96PX9 1271 aa6.32□□□□□ -1.4
SKP1-207ENST00000520417 KCMF1Q9P0J7 381 aa6.32□□□□□ -1.4
SKP1-207ENST00000520417 SYNPO2Q9UMS6 1093 aa6.32□□□□□ -1.4
SKP1-207ENST00000520417 C2orf78A6NCI8 922 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 DAPK3O43293 454 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 HMGA2P52926 109 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 BCAR1P56945 870 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 ADCY1Q08828 1119 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 SAFB2Q14151 953 aaKnown RBP eCLIP6.31□□□□□ -1.4
SKP1-207ENST00000520417 MYBPC3Q14896 1274 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 SART3Q15020 963 aaKnown RBP6.31□□□□□ -1.4
SKP1-207ENST00000520417 EPHA7Q15375 998 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 ESRP1Q6NXG1 681 aaKnown RBP6.31□□□□□ -1.4
SKP1-207ENST00000520417 GAREM2Q75VX8 874 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 PHYKPLQ8IUZ5 450 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 DHX37Q8IY37 1157 aaKnown RBP6.31□□□□□ -1.4
SKP1-207ENST00000520417 RABGGTAQ92696 567 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 LPPQ93052 612 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 WDR92Q96MX6 357 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 MYL10Q9BUA6 226 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 SLC6A15Q9H2J7 730 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 POFUT1Q9H488 388 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 POLR3BQ9NW08 1133 aaPredicted RBP6.31□□□□□ -1.4
SKP1-207ENST00000520417 THG1LQ9NWX6 298 aaKnown RBP6.31□□□□□ -1.4
SKP1-207ENST00000520417 RCAN3Q9UKA8 241 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 SPO11Q9Y5K1 396 aa6.31□□□□□ -1.4
SKP1-207ENST00000520417 ZNF891A8MT65 544 aaPredicted RBP6.3□□□□□ -1.4
SKP1-207ENST00000520417 PRPF6O94906 941 aaKnown RBP6.3□□□□□ -1.4
SKP1-207ENST00000520417 HNRNPLP14866 589 aaKnown RBP eCLIP6.3□□□□□ -1.48e-9■□□□□ 9.2
SKP1-207ENST00000520417 ATP2A2P16615 1042 aaKnown RBP6.3□□□□□ -1.4
SKP1-207ENST00000520417 ACRV1P26436 265 aa6.3□□□□□ -1.4
SKP1-207ENST00000520417 ADCY7P51828 1080 aa6.3□□□□□ -1.4
SKP1-207ENST00000520417 PTH1RQ03431 593 aa6.3□□□□□ -1.4
SKP1-207ENST00000520417 TKFCQ3LXA3 575 aa6.3□□□□□ -1.4
SKP1-207ENST00000520417 LSM12Q3MHD2 195 aaKnown RBP6.3□□□□□ -1.4
SKP1-207ENST00000520417 C16orf86Q6ZW13 317 aa6.3□□□□□ -1.4
SKP1-207ENST00000520417 ADGRE4PQ86SQ3 457 aa6.3□□□□□ -1.4
SKP1-207ENST00000520417 LRRTM3Q86VH5 581 aa6.3□□□□□ -1.4
SKP1-207ENST00000520417 PASD1Q8IV76 773 aa6.3□□□□□ -1.4
SKP1-207ENST00000520417 SYNPOQ8N3V7 929 aa6.3□□□□□ -1.4
SKP1-207ENST00000520417 CHTF18Q8WVB6 975 aa6.3□□□□□ -1.4
SKP1-207ENST00000520417 SORCS2Q96PQ0 1159 aa6.3□□□□□ -1.4
SKP1-207ENST00000520417 MRIQ9BWK5 157 aa6.3□□□□□ -1.4
SKP1-207ENST00000520417 MSL2Q9HCI7 577 aa6.3□□□□□ -1.4
SKP1-207ENST00000520417 INTS7Q9NVH2 962 aaKnown RBP6.3□□□□□ -1.4
SKP1-207ENST00000520417 GIT1Q9Y2X7 761 aa6.3□□□□□ -1.4
SKP1-207ENST00000520417 CYR61O00622 381 aa6.29□□□□□ -1.4
SKP1-207ENST00000520417 PLSCR1O15162 318 aa6.29□□□□□ -1.4
SKP1-207ENST00000520417 MAFGO15525 162 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms