RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 OAZ3Q9UMX2 235 aa5.3□□□□□ -1.56
SKP1-205ENST00000519054 MATN2O00339 956 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 NEMP1O14524 444 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 LSP1P33241 339 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 ID4P47928 161 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 NFYCQ13952 458 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 ICAM4Q14773 271 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 DHCR24Q15392 516 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 TERF2Q15554 542 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 DDB1Q16531 1140 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 SPATS1Q496A3 300 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 ATP13A4Q4VNC1 1196 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 KIAA1841Q6NSI8 718 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 KLHDC10Q6PID8 442 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 KANSL1Q7Z3B3 1105 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 STRA8Q7Z7C7 330 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 CHST13Q8NET6 341 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 CHAC2Q8WUX2 184 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 DYDC2Q96IM9 177 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 ZNF496Q96IT1 587 aaPredicted RBP5.29□□□□□ -1.56
SKP1-205ENST00000519054 C8orf49Q96NF6 230 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 SAMD11Q96NU1 681 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 MTG2Q9H4K7 406 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 CAAP1Q9H8G2 361 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 PUF60Q9UHX1 559 aaKnown RBP5.29□□□□□ -1.56
SKP1-205ENST00000519054 DENND2AQ9ULE3 1009 aa5.29□□□□□ -1.56
SKP1-205ENST00000519054 ELL2O00472 640 aaPredicted RBP5.28□□□□□ -1.56
SKP1-205ENST00000519054 CDC14BO60729 498 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 PCDH8O95206 1070 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 BPIP17213 487 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 CR2P20023 1033 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 SOX5P35711 763 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 MAGEA10P43363 369 aaPredicted RBP5.28□□□□□ -1.56
SKP1-205ENST00000519054 PHC1P78364 1004 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 CT47A1Q5JQC4 288 aaPredicted RBP5.28□□□□□ -1.56
SKP1-205ENST00000519054 GPR158Q5T848 1215 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 BROXQ5VW32 411 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 EGFLAMQ63HQ2 1017 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 TCTN3Q6NUS6 607 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 ESPNLQ6ZVH7 1005 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 BMP8AQ7Z5Y6 402 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 ZNF610Q8N9Z0 462 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 CFHR4Q92496 578 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 SLC5A5Q92911 643 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 FERMT2Q96AC1 680 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 TTC1Q99614 292 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 IFT22Q9H7X7 185 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 POLR3BQ9NW08 1133 aaPredicted RBP5.28□□□□□ -1.56
SKP1-205ENST00000519054 DNAI1Q9UI46 699 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 VWA7Q9Y334 891 aa5.28□□□□□ -1.56
SKP1-205ENST00000519054 FOXS1O43638 330 aa5.27□□□□□ -1.57
SKP1-205ENST00000519054 OPHN1O60890 802 aa5.27□□□□□ -1.57
SKP1-205ENST00000519054 RAB11FIP3O75154 756 aa5.27□□□□□ -1.57
SKP1-205ENST00000519054 H2AFYO75367 372 aaKnown RBP5.27□□□□□ -1.57
SKP1-205ENST00000519054 ACAP1Q15027 740 aa5.27□□□□□ -1.57
SKP1-205ENST00000519054 ZBTB41Q5SVQ8 909 aa5.27□□□□□ -1.57
SKP1-205ENST00000519054 TTC9BQ8N6N2 239 aa5.27□□□□□ -1.57
SKP1-205ENST00000519054 DNERQ8NFT8 737 aa5.27□□□□□ -1.57
SKP1-205ENST00000519054 NKD2Q969F2 451 aaPredicted RBP5.27□□□□□ -1.57
SKP1-205ENST00000519054 WDR92Q96MX6 357 aa5.27□□□□□ -1.57
SKP1-205ENST00000519054 OR14A2Q96R54 314 aa5.27□□□□□ -1.57
SKP1-205ENST00000519054 NOL10Q9BSC4 688 aaKnown RBP5.27□□□□□ -1.57
SKP1-205ENST00000519054 PITHD1Q9GZP4 211 aaPredicted RBP5.27□□□□□ -1.57
SKP1-205ENST00000519054 USP36Q9P275 1121 aaKnown RBP5.27□□□□□ -1.57
SKP1-205ENST00000519054 ZFR2Q9UPR6 939 aaKnown RBP5.27□□□□□ -1.57
SKP1-205ENST00000519054 CTDP1Q9Y5B0 961 aaPredicted RBP5.27□□□□□ -1.57
SKP1-205ENST00000519054 RBM8AQ9Y5S9 174 aaKnown RBP5.27□□□□□ -1.57
SKP1-205ENST00000519054 A0A0A6YYJ9 748 aa5.26□□□□□ -1.57
SKP1-205ENST00000519054 ST20-MTHFSA0A0A6YYL1 179 aa5.26□□□□□ -1.57
SKP1-205ENST00000519054 PATE3B3GLJ2 98 aa5.26□□□□□ -1.57
SKP1-205ENST00000519054 KDM1AO60341 852 aa5.26□□□□□ -1.57
SKP1-205ENST00000519054 HNRNPLP14866 589 aaKnown RBP eCLIP5.26□□□□□ -1.578e-9■□□□□ 9.2
SKP1-205ENST00000519054 CNGA1P29973 690 aa5.26□□□□□ -1.57
SKP1-205ENST00000519054 SESN2P58004 480 aaPredicted RBP5.26□□□□□ -1.57
SKP1-205ENST00000519054 ADAM17P78536 824 aa5.26□□□□□ -1.57
SKP1-205ENST00000519054 ATP2C1P98194 919 aaPredicted RBP5.26□□□□□ -1.57
SKP1-205ENST00000519054 HGFACQ04756 655 aa5.26□□□□□ -1.57
SKP1-205ENST00000519054 ZNF585AQ6P3V2 769 aa5.26□□□□□ -1.57
SKP1-205ENST00000519054 FRMD7Q6ZUT3 714 aa5.26□□□□□ -1.57
SKP1-205ENST00000519054 HDGFL2Q7Z4V5 671 aaPredicted RBP5.26□□□□□ -1.57
SKP1-205ENST00000519054 CXorf67Q86X51 503 aaPredicted RBP5.26□□□□□ -1.57
SKP1-205ENST00000519054 FUKQ8N0W3 1084 aa5.26□□□□□ -1.57
SKP1-205ENST00000519054 GCDHQ92947 438 aaPredicted RBP5.26□□□□□ -1.57
SKP1-205ENST00000519054 GFM2Q969S9 779 aaKnown RBP5.26□□□□□ -1.57
SKP1-205ENST00000519054 PLA2G12BQ9BX93 195 aa5.26□□□□□ -1.57
SKP1-205ENST00000519054 ANO3Q9BYT9 981 aa5.26□□□□□ -1.57
SKP1-205ENST00000519054 HAPLN2Q9GZV7 340 aa5.26□□□□□ -1.57
SKP1-205ENST00000519054 DEF6Q9H4E7 631 aa5.26□□□□□ -1.57
SKP1-205ENST00000519054 CD248Q9HCU0 757 aa5.26□□□□□ -1.57
SKP1-205ENST00000519054 SYNPO2Q9UMS6 1093 aa5.26□□□□□ -1.57
SKP1-205ENST00000519054 NOC2LQ9Y3T9 749 aaKnown RBP5.26□□□□□ -1.57
SKP1-205ENST00000519054 MYPNQ86TC9 1320 aa5.25□□□□□ -1.57
SKP1-205ENST00000519054 PRSS38A1L453 326 aa5.25□□□□□ -1.57
SKP1-205ENST00000519054 C2orf78A6NCI8 922 aa5.25□□□□□ -1.57
SKP1-205ENST00000519054 MAFGO15525 162 aa5.25□□□□□ -1.57
SKP1-205ENST00000519054 SLC26A4O43511 780 aa5.25□□□□□ -1.57
SKP1-205ENST00000519054 ZEB2O60315 1214 aa5.25□□□□□ -1.57
SKP1-205ENST00000519054 ZNF623O75123 536 aa5.25□□□□□ -1.57
SKP1-205ENST00000519054 ADRB1P08588 477 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms