RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 SPDYE3A6NKU9 549 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 ZBTB39O15060 712 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 EYA4O95677 639 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 PPATQ06203 517 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 DRAP1Q14919 205 aaPredicted RBP18■□□□□ 0.47
PCDHGA11-202ENST00000518882 ODF2Q5BJF6 829 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 AGBL2Q5U5Z8 902 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 ADAT2Q7Z6V5 191 aaKnown RBP18■□□□□ 0.47
PCDHGA11-202ENST00000518882 ARHGEF26Q96DR7 871 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 FAM20AQ96MK3 541 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 CRAMP1Q96RY5 1269 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 ERVK-5Q9HDB9 667 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 GGA2Q9UJY4 613 aa18■□□□□ 0.47
PCDHGA11-202ENST00000518882 RBBP6Q7Z6E9 1792 aaKnown RBP17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 DDTLA6NHG4 134 aaPredicted RBP17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 PPEF1O14829 653 aaPredicted RBP17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 MAGOHP61326 146 aaKnown RBP17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 DDR1Q08345 913 aa17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 CTTNQ14247 550 aaKnown RBP17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 SPRED3Q2MJR0 410 aa17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 CBWD6Q4V339 395 aa17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 CBWD3Q5JTY5 395 aa17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 CBWD5Q5RIA9 395 aa17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 PALB2Q86YC2 1186 aa17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 RFFLQ8WZ73 363 aa17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 MAGOHBQ96A72 148 aaKnown RBP17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 CEP89Q96ST8 783 aa17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 VCPKMTQ9H867 229 aa17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 TAS2R14Q9NYV8 317 aa17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 DNAJC12Q9UKB3 198 aa17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 UTP11Q9Y3A2 253 aaKnown RBP17.99■□□□□ 0.47
PCDHGA11-202ENST00000518882 FMO5P49326 533 aa17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 ACTN3Q08043 901 aaPredicted RBP17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 SWT1Q5T5J6 900 aaKnown RBP17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 FBXO11Q86XK2 927 aa17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 CCDC13Q8IYE1 715 aa17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 RAPGEF5Q92565 580 aa17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 POLR3CQ9BUI4 534 aaPredicted RBP17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 TXLNGYQ9BZA5 131 aa17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 NYAP2Q9P242 653 aa17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 TTC7AQ9ULT0 858 aaPredicted RBP17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 TMEM253P0C7T8 217 aa17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 PSMC2P35998 433 aaKnown RBP17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 MNAT1P51948 309 aa17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 PRPF4BQ13523 1007 aaKnown RBP17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 PLS1Q14651 629 aa17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 KRT71Q3SY84 523 aa17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 CERKLQ49MI3 558 aaPredicted RBP17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 TEKT1Q969V4 418 aa17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 CABS1Q96KC9 395 aa17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 STK33Q9BYT3 514 aa17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 FAM114A2Q9NRY5 505 aa17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 ATP8A1Q9Y2Q0 1164 aa17.98■□□□□ 0.47
PCDHGA11-202ENST00000518882 TRIM49P0CI25 452 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 TRIM49CP0CI26 452 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 LMNB1P20700 586 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 CIITAP33076 1130 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 PTENP60484 403 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 ZNF211Q13398 564 aaPredicted RBP17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 BYSLQ13895 437 aaKnown RBP17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 HHIPL2Q6UWX4 724 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 SP8Q8IXZ3 490 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 MYCT1Q8N699 235 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 THAP2Q9H0W7 228 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 COG5Q9UP83 839 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 THSD7AQ9UPZ6 1657 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 UBAP1LF5GYI3 381 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 F5H6K3 240 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 EIF3DO15371 548 aaKnown RBP eCLIP17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 PPFIA2O75334 1257 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 PAEPP09466 180 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 KLRC3Q07444 240 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 SH3BP5LQ7L8J4 393 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 GLG1Q92896 1179 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 FIZ1Q96SL8 496 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 FMO2Q99518 471 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 HSD17B14Q9BPX1 270 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 OSBPL7Q9BZF2 842 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 EPB41L4BQ9H329 900 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 NRXN2Q9P2S2 1712 aa17.97■□□□□ 0.47
PCDHGA11-202ENST00000518882 FRMPD4Q14CM0 1322 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 IGLV3-22A0A075B6J6 115 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 FAM13AO94988 1023 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 SHBGP04278 402 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 ADRA2BP18089 450 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 MMP14P50281 582 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 ICA1Q05084 483 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 CHADLQ6NUI6 762 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 AADACL2Q6P093 401 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 C1orf186Q6ZWK4 172 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 CTNNBL1Q8WYA6 563 aaPredicted RBP17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 ALG3Q92685 438 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 ZC3H12CQ9C0D7 883 aaKnown RBP17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 ZDHHC18Q9NUE0 388 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 ANKRD31Q8N7Z5 1873 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 CAND2O75155 1236 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 SLITRK3O94933 977 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 GDF11O95390 407 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 NDUFB10O96000 172 aa17.96■□□□□ 0.47
PCDHGA11-202ENST00000518882 FOSP01100 380 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms