RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 CYP2B6P20813 491 aa7.56□□□□□ -1.2
CCDC6-203ENST00000518638 SOX9P48436 509 aa7.56□□□□□ -1.2
CCDC6-203ENST00000518638 IRX3P78415 501 aaPredicted RBP7.56□□□□□ -1.2
CCDC6-203ENST00000518638 LRRFIP1Q32MZ4 808 aaKnown RBP7.56□□□□□ -1.2
CCDC6-203ENST00000518638 TWISTNBQ3B726 338 aaPredicted RBP7.56□□□□□ -1.2
CCDC6-203ENST00000518638 METTL24Q5JXM2 366 aa7.56□□□□□ -1.2
CCDC6-203ENST00000518638 OVOS1Q6IE37 1185 aa7.56□□□□□ -1.2
CCDC6-203ENST00000518638 CDC42EP5Q6NZY7 148 aa7.56□□□□□ -1.2
CCDC6-203ENST00000518638 ZGPATQ8N5A5 531 aaKnown RBP7.56□□□□□ -1.2
CCDC6-203ENST00000518638 PPP1R13LQ8WUF5 828 aa7.56□□□□□ -1.2
CCDC6-203ENST00000518638 COX4I2Q96KJ9 171 aa7.56□□□□□ -1.2
CCDC6-203ENST00000518638 CCDC74BQ96LY2 380 aa7.56□□□□□ -1.2
CCDC6-203ENST00000518638 APBA2Q99767 749 aa7.56□□□□□ -1.2
CCDC6-203ENST00000518638 IDI2Q9BXS1 227 aa7.56□□□□□ -1.2
CCDC6-203ENST00000518638 SENP6Q9GZR1 1112 aaPredicted RBP7.56□□□□□ -1.2
CCDC6-203ENST00000518638 OSBPL5Q9H0X9 879 aaPredicted RBP7.56□□□□□ -1.2
CCDC6-203ENST00000518638 TTYH1Q9H313 450 aaPredicted RBP7.56□□□□□ -1.2
CCDC6-203ENST00000518638 AS3MTQ9HBK9 375 aa7.56□□□□□ -1.2
CCDC6-203ENST00000518638 GINM1Q9NU53 330 aa7.56□□□□□ -1.2
CCDC6-203ENST00000518638 CEP131Q9UPN4 1083 aa7.56□□□□□ -1.2
CCDC6-203ENST00000518638 INPP5FQ9Y2H2 1132 aa7.56□□□□□ -1.2
CCDC6-203ENST00000518638 SPTBN5Q9NRC6 3674 aaKnown RBP7.56□□□□□ -1.2
CCDC6-203ENST00000518638 GLRX3O76003 335 aaKnown RBP7.55□□□□□ -1.2
CCDC6-203ENST00000518638 PDE8BO95263 885 aa7.55□□□□□ -1.2
CCDC6-203ENST00000518638 IMPDH2P12268 514 aa7.55□□□□□ -1.2
CCDC6-203ENST00000518638 CYP7A1P22680 504 aa7.55□□□□□ -1.2
CCDC6-203ENST00000518638 ETV3P41162 512 aa7.55□□□□□ -1.2
CCDC6-203ENST00000518638 RTP1P59025 263 aa7.55□□□□□ -1.2
CCDC6-203ENST00000518638 MRPS5P82675 430 aaKnown RBP7.55□□□□□ -1.2
CCDC6-203ENST00000518638 CACNB2Q08289 660 aaPredicted RBP7.55□□□□□ -1.2
CCDC6-203ENST00000518638 PUM3Q15397 648 aaKnown RBP7.55□□□□□ -1.2
CCDC6-203ENST00000518638 SHHQ15465 462 aa7.55□□□□□ -1.2
CCDC6-203ENST00000518638 ARSHQ5FYA8 562 aa7.55□□□□□ -1.2
CCDC6-203ENST00000518638 TMEM67Q5HYA8 995 aa7.55□□□□□ -1.2
CCDC6-203ENST00000518638 SFRP5Q5T4F7 317 aa7.55□□□□□ -1.2
CCDC6-203ENST00000518638 CDCP2Q5VXM1 449 aa7.55□□□□□ -1.2
CCDC6-203ENST00000518638 MFSD14CQ5VZR4 134 aa7.55□□□□□ -1.2
CCDC6-203ENST00000518638 CDH24Q86UP0 819 aa7.55□□□□□ -1.2
CCDC6-203ENST00000518638 LPAR1Q92633 364 aa7.55□□□□□ -1.2
CCDC6-203ENST00000518638 ASB2Q96Q27 587 aa7.55□□□□□ -1.2
CCDC6-203ENST00000518638 UHRF1Q96T88 793 aaPredicted RBP7.55□□□□□ -1.2
CCDC6-203ENST00000518638 ASCC2Q9H1I8 757 aaPredicted RBP7.55□□□□□ -1.2
CCDC6-203ENST00000518638 CNNM2Q9H8M5 875 aa7.55□□□□□ -1.2
CCDC6-203ENST00000518638 CWC22Q9HCG8 908 aaKnown RBP7.55□□□□□ -1.2
CCDC6-203ENST00000518638 C9orf78Q9NZ63 289 aaPredicted RBP7.55□□□□□ -1.2
CCDC6-203ENST00000518638 TTC28Q96AY4 2481 aa7.54□□□□□ -1.2
CCDC6-203ENST00000518638 KBTBD13C9JR72 458 aa7.54□□□□□ -1.2
CCDC6-203ENST00000518638 SLC5A1P13866 664 aa7.54□□□□□ -1.2
CCDC6-203ENST00000518638 AKNAD1Q5T1N1 836 aa7.54□□□□□ -1.2
CCDC6-203ENST00000518638 TREML2Q5T2D2 321 aa7.54□□□□□ -1.2
CCDC6-203ENST00000518638 PHACTR4Q8IZ21 702 aa7.54□□□□□ -1.2
CCDC6-203ENST00000518638 TSPYL6Q8N831 410 aa7.54□□□□□ -1.2
CCDC6-203ENST00000518638 ARRDC4Q8NCT1 418 aa7.54□□□□□ -1.2
CCDC6-203ENST00000518638 GPRC5AQ8NFJ5 357 aa7.54□□□□□ -1.2
CCDC6-203ENST00000518638 ATG4CQ96DT6 458 aa7.54□□□□□ -1.2
CCDC6-203ENST00000518638 RNPC3Q96LT9 517 aaKnown RBP7.54□□□□□ -1.2
CCDC6-203ENST00000518638 FERD3LQ96RJ6 166 aa7.54□□□□□ -1.2
CCDC6-203ENST00000518638 USP40Q9NVE5 1235 aa7.54□□□□□ -1.2
CCDC6-203ENST00000518638 GNL3LQ9NVN8 582 aaKnown RBP7.54□□□□□ -1.2
CCDC6-203ENST00000518638 TMOD4Q9NZQ9 345 aa7.54□□□□□ -1.2
CCDC6-203ENST00000518638 DDX20Q9UHI6 824 aaKnown RBP7.54□□□□□ -1.2
CCDC6-203ENST00000518638 EFR3BQ9Y2G0 817 aa7.54□□□□□ -1.2
CCDC6-203ENST00000518638 ATAD5Q96QE3 1844 aa7.54□□□□□ -1.2
CCDC6-203ENST00000518638 UTYO14607 1347 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 SALL1Q9NSC2 1324 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 RLFQ13129 1914 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 MYH2Q9UKX2 1941 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.53□□□□□ -1.2
CCDC6-203ENST00000518638 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.53□□□□□ -1.2
CCDC6-203ENST00000518638 RGS13O14921 159 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 ALDH1L1O75891 902 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 MAP4K4O95819 1239 aaPredicted RBP7.53□□□□□ -1.2
CCDC6-203ENST00000518638 TMEM253P0C7T8 217 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 RAG1P15918 1043 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 CCND3P30281 292 aaPredicted RBP7.53□□□□□ -1.2
CCDC6-203ENST00000518638 HOXA7P31268 230 aaPredicted RBP7.53□□□□□ -1.2
CCDC6-203ENST00000518638 KIR3DL1P43629 444 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 RGS3P49796 1198 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 HMGCS2P54868 508 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 CCNA1P78396 465 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 KCNA10Q16322 511 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 AAK1Q2M2I8 961 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 BEND3Q5T5X7 828 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 CCDC174Q6PII3 467 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 G2E3Q7L622 706 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 NLRC3Q7RTR2 1065 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 SPACA3Q8IXA5 215 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 RBBP8NLQ8NC74 664 aaPredicted RBP7.53□□□□□ -1.2
CCDC6-203ENST00000518638 BAHD1Q8TBE0 780 aaPredicted RBP7.53□□□□□ -1.2
CCDC6-203ENST00000518638 SEC16BQ96JE7 1060 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 KIF2CQ99661 725 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 ANTXR1Q9H6X2 564 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 CD320Q9NPF0 282 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 PPT2Q9UMR5 302 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 ATP11BQ9Y2G3 1177 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 RFX7Q2KHR2 1363 aa7.53□□□□□ -1.2
CCDC6-203ENST00000518638 C19orf81C9J6K1 198 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 APAF1O14727 1248 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 TNFRSF10CO14798 259 aa7.52□□□□□ -1.21
CCDC6-203ENST00000518638 NME1P15531 152 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms