RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ETV4P43268 484 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 KCNC1P48547 511 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 GPR15P49685 360 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 EVA1CP58658 441 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 EXOSC10Q01780 885 aaKnown RBP5.05□□□□□ -1.6
VPS13B-207ENST00000518569 KLF1Q13351 362 aaPredicted RBP5.05□□□□□ -1.6
VPS13B-207ENST00000518569 MTMR1Q13613 665 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 VMACQ2NL98 169 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 ZBTB41Q5SVQ8 909 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 MCTP2Q6DN12 878 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 OTOP2Q7RTS6 562 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 ADGRG2Q8IZP9 1017 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 COG1Q8WTW3 980 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 LCORQ96JN0 433 aaPredicted RBP5.05□□□□□ -1.6
VPS13B-207ENST00000518569 TRIM8Q9BZR9 551 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 DDX56Q9NY93 547 aaKnown RBP5.05□□□□□ -1.6
VPS13B-207ENST00000518569 SAE1Q9UBE0 346 aaPredicted RBP5.05□□□□□ -1.6
VPS13B-207ENST00000518569 SYNPO2Q9UMS6 1093 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 SPEF1Q9Y4P9 236 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 PPP2R3BQ9Y5P8 575 aa5.05□□□□□ -1.6
VPS13B-207ENST00000518569 WASHC2AQ641Q2 1341 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 MROH6A6NGR9 719 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 OPHN1O60890 802 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 ENPP1P22413 925 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 SESN2P58004 480 aaPredicted RBP5.04□□□□□ -1.6
VPS13B-207ENST00000518569 ZNF827Q17R98 1081 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 INAVAQ3KP66 663 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 BRDTQ58F21 947 aaPredicted RBP5.04□□□□□ -1.6
VPS13B-207ENST00000518569 SYDE2Q5VT97 1194 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 TRIM68Q6AZZ1 485 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 UNQ6494/PRO21346Q6UXR6 183 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 FERMT3Q86UX7 667 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 FAM124AQ86V42 546 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 BCL6BQ8N143 479 aaPredicted RBP5.04□□□□□ -1.6
VPS13B-207ENST00000518569 MARCH10Q8NA82 808 aaPredicted RBP5.04□□□□□ -1.6
VPS13B-207ENST00000518569 OR5AN1Q8NGI8 311 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 MBD6Q96DN6 1003 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 CARD11Q9BXL7 1154 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 ANO3Q9BYT9 981 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 MTG2Q9H4K7 406 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 C14orf119Q9NWQ9 140 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 TMPRSS11EQ9UL52 423 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 VWA7Q9Y334 891 aa5.04□□□□□ -1.6
VPS13B-207ENST00000518569 TRIM75PA6NK02 468 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 NOBOXO60393 691 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 KATNA1O75449 491 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 HMGCRP04035 888 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 PDGFRBP09619 1106 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 CSF2RBP32927 897 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 ADCY8P40145 1251 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 BUD31P41223 144 aaPredicted RBP5.03□□□□□ -1.6
VPS13B-207ENST00000518569 GPR3P46089 330 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 GJA9P57773 515 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 KRT85P78386 507 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 ITKQ08881 620 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 FAM50AQ14320 339 aaKnown RBP5.03□□□□□ -1.6
VPS13B-207ENST00000518569 USP10Q14694 798 aaKnown RBP5.03□□□□□ -1.6
VPS13B-207ENST00000518569 UGT8Q16880 541 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 CDYL2Q8N8U2 506 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 RAX2Q96IS3 184 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 HIST1H2AHQ96KK5 128 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 PUS7Q96PZ0 661 aaKnown RBP5.03□□□□□ -1.6
VPS13B-207ENST00000518569 HIST1H2AJQ99878 128 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 OSBPL6Q9BZF3 934 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 ZCCHC4Q9H5U6 513 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 POLR3BQ9NW08 1133 aaPredicted RBP5.03□□□□□ -1.6
VPS13B-207ENST00000518569 RAPGEFL1Q9UHV5 662 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 TRHDEQ9UKU6 1024 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 PCDHB6Q9Y5E3 794 aa5.03□□□□□ -1.6
VPS13B-207ENST00000518569 NRP2O60462 931 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 TRIM13O60858 407 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 SASH1O94885 1247 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 CFBP00751 764 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 MTHFD2P13995 350 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 BMP7P18075 431 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 KCNQ1P51787 676 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 SCAND1P57086 179 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 ANTXR2P58335 489 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 MRPS9P82933 396 aaKnown RBP5.02□□□□□ -1.61
VPS13B-207ENST00000518569 MAN2A1Q16706 1144 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 ZMAT1Q5H9K5 638 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 PITRM1Q5JRX3 1037 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 BORAQ6PGQ7 559 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 LYSMD2Q8IV50 215 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 SLC41A1Q8IVJ1 513 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 CBARPQ8N350 705 aaPredicted RBP5.02□□□□□ -1.61
VPS13B-207ENST00000518569 OR14C36Q8NHC7 312 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 PPP1R14CQ8TAE6 165 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 STAG1Q8WVM7 1258 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 SSH1Q8WYL5 1049 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 LPPQ93052 612 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 GFM2Q969S9 779 aaKnown RBP5.02□□□□□ -1.61
VPS13B-207ENST00000518569 KCNC2Q96PR1 638 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 NOL10Q9BSC4 688 aaKnown RBP5.02□□□□□ -1.61
VPS13B-207ENST00000518569 ASPSCR1Q9BZE9 553 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 PRSS50Q9UI38 385 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 CDC42EP3Q9UKI2 254 aa5.02□□□□□ -1.61
VPS13B-207ENST00000518569 GABRDO14764 452 aa5.01□□□□□ -1.61
VPS13B-207ENST00000518569 H2AFYO75367 372 aaKnown RBP5.01□□□□□ -1.61
VPS13B-207ENST00000518569 PCDH8O95206 1070 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms