RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 HIC1Q14526 733 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TARBP2Q15633 366 aaKnown RBP8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 HYIQ5T013 277 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 MARCH8Q5T0T0 291 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 PLA2G4FQ68DD2 849 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 ADALQ6DHV7 355 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 EFCAB12Q6NXP0 572 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 NME8Q8N427 588 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 SLC7A3Q8WY07 619 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 EPSTI1Q96J88 318 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 MAP7D2Q96T17 732 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 MMTAG2Q9BU76 263 aaKnown RBP8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 HIPK3Q9H422 1215 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 SUGCTQ9HAC7 445 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 FAM13BQ9NYF5 915 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 DBR1Q9UK59 544 aaKnown RBP8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TBX21Q9UL17 535 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 PCDHA7Q9UN72 937 aa8.56□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TMEM150BA6NC51 233 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TRIM43BA6NCK2 446 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 E9PMD0 336 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 GOLGA6L22H0YM25 854 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 ZBTB39O15060 712 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 DGAT1O75907 488 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 PARNO95453 639 aaKnown RBP8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 EYA4O95677 639 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TIMP1P01033 207 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 DEKP35659 375 aaKnown RBP8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 THPOP40225 353 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 RARRES1P49788 294 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CDC42EP1Q00587 391 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 GRB10Q13322 594 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 KARSQ15046 597 aaKnown RBP8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 ECM1Q16610 540 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TMEM119Q4V9L6 283 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 C6orf132Q5T0Z8 1188 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 AXDND1Q5T1B0 1012 aaPredicted RBP8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 IER5Q5VY09 327 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 RRAGBQ5VZM2 374 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 RUFY4Q6ZNE9 571 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CCDC73Q6ZRK6 1079 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 SH3RF1Q7Z6J0 888 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 RPAINQ86UA6 219 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TMEM199Q8N511 208 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 DNAJB3Q8WWF6 145 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TCP11Q8WWU5 503 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TRIM43Q96BQ3 446 aaPredicted RBP8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CHAMP1Q96JM3 812 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CTAGE1Q96RT6 745 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 PLIN2Q99541 437 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 MTRQ99707 1265 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 LBHD1Q9BQE6 289 aaPredicted RBP8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 SH2D3AQ9BRG2 576 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 PYM1Q9BRP8 204 aaKnown RBP8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 NOC4LQ9BVI4 516 aaKnown RBP8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 PPP1R12CQ9BZL4 782 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 FAM49AQ9H0Q0 323 aaPredicted RBP8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 BHMT2Q9H2M3 363 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 DHX33Q9H6R0 707 aaKnown RBP8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 ATP6V0A4Q9HBG4 840 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 STK17AQ9UEE5 414 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 ZMYND8Q9ULU4 1186 aaPredicted RBP8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 AKT3Q9Y243 479 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 MYH11P35749 1972 aa8.55□□□□□ -1.04
CSGALNACT1-206ENST00000518542 A0A087WWV3 80 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 IGKV6-21A0A0C4DH24 114 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 USO1O60763 962 aaKnown RBP8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 SSBP05455 408 aaKnown RBP eCLIP8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CKBP12277 381 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 SELPP16109 830 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 SYN1P17600 705 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 PLCG1P19174 1290 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CMA1P23946 247 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CYP2C18P33260 490 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 STAT6P42226 847 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CLCN3P51790 818 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 RBL2Q08999 1139 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 EMC2Q15006 297 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TRIM71Q2Q1W2 868 aaKnown RBP8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 ZNF618Q5T7W0 954 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 RESP18Q5W5W9 173 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 MFSD5Q6N075 450 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 PADI6Q6TGC4 694 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 USP49Q70CQ1 688 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 KIAA0319LQ8IZA0 1049 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 LRRC71Q8N4P6 559 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 MCPH1Q8NEM0 835 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 LARP4BQ92615 738 aaKnown RBP8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 DHX38Q92620 1227 aaKnown RBP8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 ZBTB10Q96DT7 871 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 PNMA5Q96PV4 448 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 CEP89Q96ST8 783 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 GDPD2Q9HCC8 539 aa8.54□□□□□ -1.04
CSGALNACT1-206ENST00000518542 TANC1Q9C0D5 1861 aa8.53□□□□□ -1.04
CSGALNACT1-206ENST00000518542 LTBP2Q14767 1821 aa8.53□□□□□ -1.04
CSGALNACT1-206ENST00000518542 A0A1W2PQ27 194 aa8.53□□□□□ -1.04
CSGALNACT1-206ENST00000518542 A0A1W2PQ64 194 aa8.53□□□□□ -1.04
CSGALNACT1-206ENST00000518542 A0A1W2PQD8 194 aa8.53□□□□□ -1.04
CSGALNACT1-206ENST00000518542 RSPH10B2B2RC85 870 aa8.53□□□□□ -1.04
CSGALNACT1-206ENST00000518542 ASAP2O43150 1006 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms