RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 SYT9Q86SS6 491 aa6.96□□□□□ -1.3
MRPS28-203ENST00000518371 TEX2Q8IWB9 1127 aa6.96□□□□□ -1.3
MRPS28-203ENST00000518371 NECAB1Q8N987 351 aa6.96□□□□□ -1.3
MRPS28-203ENST00000518371 CCDC148Q8NFR7 591 aa6.96□□□□□ -1.3
MRPS28-203ENST00000518371 BICD2Q8TD16 824 aa6.96□□□□□ -1.3
MRPS28-203ENST00000518371 AFG1LQ8WV93 481 aa6.96□□□□□ -1.3
MRPS28-203ENST00000518371 PGBD1Q96JS3 809 aa6.96□□□□□ -1.3
MRPS28-203ENST00000518371 PPP1R12CQ9BZL4 782 aa6.96□□□□□ -1.3
MRPS28-203ENST00000518371 MLXIPQ9HAP2 919 aa6.96□□□□□ -1.3
MRPS28-203ENST00000518371 TMEM260Q9NX78 707 aa6.96□□□□□ -1.3
MRPS28-203ENST00000518371 VPS54Q9P1Q0 977 aa6.96□□□□□ -1.3
MRPS28-203ENST00000518371 LIMCH1Q9UPQ0 1083 aa6.96□□□□□ -1.3
MRPS28-203ENST00000518371 ELP1O95163 1332 aa6.96□□□□□ -1.3
MRPS28-203ENST00000518371 NID2Q14112 1375 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 A0A0U1RQG5 324 aaPredicted RBP6.95□□□□□ -1.3
MRPS28-203ENST00000518371 ESYT2A0FGR8 921 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 ARVCFO00192 962 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 TLR3O15455 904 aaKnown RBP6.95□□□□□ -1.3
MRPS28-203ENST00000518371 FIBPO43427 364 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 PQBP1O60828 265 aaKnown RBP6.95□□□□□ -1.3
MRPS28-203ENST00000518371 GGPS1O95749 300 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 RBM25P49756 843 aaKnown RBP6.95□□□□□ -1.3
MRPS28-203ENST00000518371 PSMC6P62333 389 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 AP3B2Q13367 1082 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 ITGA7Q13683 1181 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 NEDD9Q14511 834 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 RABEP1Q15276 862 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 ME3Q16798 604 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 RAB44Q7Z6P3 723 aaPredicted RBP6.95□□□□□ -1.3
MRPS28-203ENST00000518371 REXO1Q8N1G1 1221 aaKnown RBP6.95□□□□□ -1.3
MRPS28-203ENST00000518371 WASF1Q92558 559 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 CDHR1Q96JP9 859 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 ZSCAN31Q96LW9 406 aaPredicted RBP6.95□□□□□ -1.3
MRPS28-203ENST00000518371 SPATA33Q96N06 139 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 INPP4AQ96PE3 977 aaPredicted RBP6.95□□□□□ -1.3
MRPS28-203ENST00000518371 LBHD1Q9BQE6 289 aaPredicted RBP6.95□□□□□ -1.3
MRPS28-203ENST00000518371 MTG1Q9BT17 334 aaPredicted RBP6.95□□□□□ -1.3
MRPS28-203ENST00000518371 SEZ6LQ9BYH1 1024 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 ANO3Q9BYT9 981 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 ZMYND12Q9H0C1 365 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 PRDM5Q9NQX1 630 aaPredicted RBP6.95□□□□□ -1.3
MRPS28-203ENST00000518371 SH3GLB2Q9NR46 395 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 ORC3Q9UBD5 711 aaPredicted RBP6.95□□□□□ -1.3
MRPS28-203ENST00000518371 PLXNA1Q9UIW2 1896 aa6.95□□□□□ -1.3
MRPS28-203ENST00000518371 RBBP6Q7Z6E9 1792 aaKnown RBP6.95□□□□□ -1.3
MRPS28-203ENST00000518371 NOP56O00567 594 aaKnown RBP6.94□□□□□ -1.3
MRPS28-203ENST00000518371 MAFGO15525 162 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 DTNBO60941 627 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 PPFIA4O75335 1185 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 LARGE1O95461 756 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 ICAM3P32942 547 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 CDK7P50613 346 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 SEC13P55735 322 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 PURAQ00577 322 aaKnown RBP6.94□□□□□ -1.3
MRPS28-203ENST00000518371 SP2Q02086 613 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 SP4Q02446 784 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 ARHGAP1Q07960 439 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 PTK7Q13308 1070 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 SNX17Q15036 470 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 DGKDQ16760 1214 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 CRTC2Q53ET0 693 aaPredicted RBP6.94□□□□□ -1.3
MRPS28-203ENST00000518371 FAM47CQ5HY64 1035 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 CELF3Q5SZQ8 465 aaKnown RBP6.94□□□□□ -1.3
MRPS28-203ENST00000518371 CYFIP1Q7L576 1253 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 GIMAP8Q8ND71 665 aaPredicted RBP6.94□□□□□ -1.3
MRPS28-203ENST00000518371 GTF3C6Q969F1 213 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 GPRASP2Q96D09 838 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 SUSD3Q96L08 255 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 CALR3Q96L12 384 aaKnown RBP6.94□□□□□ -1.3
MRPS28-203ENST00000518371 TOX2Q96NM4 488 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 AIFM3Q96NN9 605 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 MXRA8Q9BRK3 442 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 C2orf49Q9BVC5 232 aaPredicted RBP6.94□□□□□ -1.3
MRPS28-203ENST00000518371 NEUROD4Q9HD90 331 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 JADE2Q9NQC1 790 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 TMEM39AQ9NV64 488 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 UBIAD1Q9Y5Z9 338 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 FRMPD4Q14CM0 1322 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 MROH7Q68CQ1 1323 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 PDE4DIPQ5VU43 2346 aa6.94□□□□□ -1.3
MRPS28-203ENST00000518371 ELOA3CA0A087WX78 387 aaPredicted RBP6.93□□□□□ -1.3
MRPS28-203ENST00000518371 ELOA3DA6NLF2 546 aaPredicted RBP6.93□□□□□ -1.3
MRPS28-203ENST00000518371 SIN3BO75182 1162 aa6.93□□□□□ -1.3
MRPS28-203ENST00000518371 CTDNEP1O95476 244 aa6.93□□□□□ -1.3
MRPS28-203ENST00000518371 MMP3P08254 477 aa6.93□□□□□ -1.3
MRPS28-203ENST00000518371 CLTBP09497 229 aa6.93□□□□□ -1.3
MRPS28-203ENST00000518371 RAG1P15918 1043 aa6.93□□□□□ -1.3
MRPS28-203ENST00000518371 ITGB5P18084 799 aa6.93□□□□□ -1.3
MRPS28-203ENST00000518371 UBA1P22314 1058 aaKnown RBP6.93□□□□□ -1.3
MRPS28-203ENST00000518371 SREBF1P36956 1147 aa6.93□□□□□ -1.3
MRPS28-203ENST00000518371 ARHGAP4P98171 946 aa6.93□□□□□ -1.3
MRPS28-203ENST00000518371 MTMR1Q13613 665 aa6.93□□□□□ -1.3
MRPS28-203ENST00000518371 TRIM29Q14134 588 aa6.93□□□□□ -1.3
MRPS28-203ENST00000518371 HSDL1Q3SXM5 330 aa6.93□□□□□ -1.3
MRPS28-203ENST00000518371 ELOA3BQ3SY89 546 aa6.93□□□□□ -1.3
MRPS28-203ENST00000518371 CEP55Q53EZ4 464 aa6.93□□□□□ -1.3
MRPS28-203ENST00000518371 UTP14CQ5TAP6 766 aaKnown RBP6.93□□□□□ -1.3
MRPS28-203ENST00000518371 MCTP1Q6DN14 999 aa6.93□□□□□ -1.3
MRPS28-203ENST00000518371 GALNT17Q6IS24 598 aa6.93□□□□□ -1.3
MRPS28-203ENST00000518371 METTL7BQ6UX53 244 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms