RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 SYCP3Q8IZU3 236 aa25.65■■□□□ 1.7
SLIT3-204ENST00000518140 ABRAQ8N0Z2 381 aa25.65■■□□□ 1.7
SLIT3-204ENST00000518140 MYH9P35579 1960 aaKnown RBP25.65■■□□□ 1.7
SLIT3-204ENST00000518140 CCDC169A6NNP5 214 aa25.65■■□□□ 1.7
SLIT3-204ENST00000518140 ARHGAP6O43182 974 aa25.65■■□□□ 1.7
SLIT3-204ENST00000518140 RPL13P26373 211 aaKnown RBP25.65■■□□□ 1.7
SLIT3-204ENST00000518140 NCKAP1LP55160 1127 aa25.65■■□□□ 1.7
SLIT3-204ENST00000518140 GTF2BQ00403 316 aa25.65■■□□□ 1.7
SLIT3-204ENST00000518140 TAPT1Q6NXT6 567 aa25.65■■□□□ 1.7
SLIT3-204ENST00000518140 FRMD5Q7Z6J6 570 aa25.65■■□□□ 1.7
SLIT3-204ENST00000518140 DHX37Q8IY37 1157 aaKnown RBP25.65■■□□□ 1.7
SLIT3-204ENST00000518140 CEP89Q96ST8 783 aa25.65■■□□□ 1.7
SLIT3-204ENST00000518140 PASKQ96RG2 1323 aa25.64■■□□□ 1.7
SLIT3-204ENST00000518140 TRIM21P19474 475 aaKnown RBP25.64■■□□□ 1.7
SLIT3-204ENST00000518140 CYP2J2P51589 502 aa25.64■■□□□ 1.7
SLIT3-204ENST00000518140 TOGARAM2Q6ZUX3 1019 aa25.64■■□□□ 1.7
SLIT3-204ENST00000518140 ZNF710Q8N1W2 664 aa25.64■■□□□ 1.7
SLIT3-204ENST00000518140 C16orf45Q96MC5 204 aaPredicted RBP25.64■■□□□ 1.7
SLIT3-204ENST00000518140 SPATA33Q96N06 139 aa25.64■■□□□ 1.7
SLIT3-204ENST00000518140 KCND1Q9NSA2 647 aa25.64■■□□□ 1.7
SLIT3-204ENST00000518140 FAM207AQ9NSI2 230 aaPredicted RBP25.64■■□□□ 1.7
SLIT3-204ENST00000518140 DMAC2Q9NW81 257 aa25.64■■□□□ 1.7
SLIT3-204ENST00000518140 ARMCX3Q9UH62 379 aaPredicted RBP25.64■■□□□ 1.7
SLIT3-204ENST00000518140 PLXNB2O15031 1838 aa25.64■■□□□ 1.69
SLIT3-204ENST00000518140 KCNJ6P48051 423 aa25.64■■□□□ 1.69
SLIT3-204ENST00000518140 GRB14Q14449 540 aa25.64■■□□□ 1.69
SLIT3-204ENST00000518140 RAD9BQ6WBX8 426 aa25.64■■□□□ 1.69
SLIT3-204ENST00000518140 DPP9Q86TI2 863 aa25.64■■□□□ 1.69
SLIT3-204ENST00000518140 TMEM161BQ8NDZ6 487 aa25.64■■□□□ 1.69
SLIT3-204ENST00000518140 BORCS6Q96GS4 357 aa25.64■■□□□ 1.69
SLIT3-204ENST00000518140 MMRN2Q9H8L6 949 aa25.64■■□□□ 1.69
SLIT3-204ENST00000518140 LUC7L2Q9Y383 392 aaKnown RBP25.64■■□□□ 1.69
SLIT3-204ENST00000518140 LOC102724159A0A0B4J2E5 919 aa25.63■■□□□ 1.69
SLIT3-204ENST00000518140 SNAI1O95863 264 aaPredicted RBP25.63■■□□□ 1.69
SLIT3-204ENST00000518140 KCNH2Q12809 1159 aa25.63■■□□□ 1.69
SLIT3-204ENST00000518140 PWP2Q15269 919 aaKnown RBP25.63■■□□□ 1.69
SLIT3-204ENST00000518140 HS2ST1Q7LGA3 356 aa25.63■■□□□ 1.69
SLIT3-204ENST00000518140 PLEKHH3Q7Z736 793 aa25.63■■□□□ 1.69
SLIT3-204ENST00000518140 KIFAP3Q92845 792 aa25.63■■□□□ 1.69
SLIT3-204ENST00000518140 TMEM143Q96AN5 459 aa25.63■■□□□ 1.69
SLIT3-204ENST00000518140 CCDC51Q96ER9 411 aa25.63■■□□□ 1.69
SLIT3-204ENST00000518140 CRACR2AQ9BSW2 395 aa25.63■■□□□ 1.69
SLIT3-204ENST00000518140 NIFKQ9BYG3 293 aaKnown RBP25.63■■□□□ 1.69
SLIT3-204ENST00000518140 ST6GALNAC4Q9H4F1 302 aa25.63■■□□□ 1.69
SLIT3-204ENST00000518140 ATP6V0A4Q9HBG4 840 aa25.63■■□□□ 1.69
SLIT3-204ENST00000518140 MANSC4A6NHS7 340 aaPredicted RBP25.62■■□□□ 1.69
SLIT3-204ENST00000518140 FECHP22830 423 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 MARK3P27448 753 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 TTLL4Q14679 1199 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 NFIL3Q16649 462 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 MAMDC4Q6UXC1 1216 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 AFAP1L1Q8TED9 768 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 TSC1Q92574 1164 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 PPP1R13BQ96KQ4 1090 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 ACCSQ96QU6 501 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 KATNBL1Q9H079 304 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 ZMYND15Q9H091 742 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 DIS3Q9Y2L1 958 aaKnown RBP25.62■■□□□ 1.69
SLIT3-204ENST00000518140 ADGRA3Q8IWK6 1321 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 ADGRA2Q96PE1 1338 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 APBA1Q02410 837 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 DMP1Q13316 513 aaPredicted RBP25.62■■□□□ 1.69
SLIT3-204ENST00000518140 EMC2Q15006 297 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 MCPH1Q8NEM0 835 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 SCFD2Q8WU76 684 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 NTPCRQ9BSD7 190 aaKnown RBP25.62■■□□□ 1.69
SLIT3-204ENST00000518140 NUP58Q9BVL2 599 aa25.62■■□□□ 1.69
SLIT3-204ENST00000518140 POLR3FQ9H1D9 316 aaPredicted RBP25.62■■□□□ 1.69
SLIT3-204ENST00000518140 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.62■■□□□ 1.69
SLIT3-204ENST00000518140 ARID2Q68CP9 1835 aa25.61■■□□□ 1.69
SLIT3-204ENST00000518140 NOP56O00567 594 aaKnown RBP25.61■■□□□ 1.69
SLIT3-204ENST00000518140 RIOK3O14730 519 aaKnown RBP25.61■■□□□ 1.69
SLIT3-204ENST00000518140 POLGP54098 1239 aaPredicted RBP25.61■■□□□ 1.69
SLIT3-204ENST00000518140 TARBP2Q15633 366 aaKnown RBP25.61■■□□□ 1.69
SLIT3-204ENST00000518140 FAM160B1Q5W0V3 765 aa25.61■■□□□ 1.69
SLIT3-204ENST00000518140 ZSWIM2Q8NEG5 633 aa25.61■■□□□ 1.69
SLIT3-204ENST00000518140 OR8K1Q8NGG5 319 aa25.61■■□□□ 1.69
SLIT3-204ENST00000518140 NPLOC4Q8TAT6 608 aa25.61■■□□□ 1.69
SLIT3-204ENST00000518140 GLG1Q92896 1179 aa25.61■■□□□ 1.69
SLIT3-204ENST00000518140 MAML3Q96JK9 1138 aa25.61■■□□□ 1.69
SLIT3-204ENST00000518140 CHP1Q99653 195 aa25.61■■□□□ 1.69
SLIT3-204ENST00000518140 DESI2Q9BSY9 194 aa25.61■■□□□ 1.69
SLIT3-204ENST00000518140 CCDC94Q9BW85 323 aaPredicted RBP25.61■■□□□ 1.69
SLIT3-204ENST00000518140 PCIF1Q9H4Z3 704 aa25.61■■□□□ 1.69
SLIT3-204ENST00000518140 DHX33Q9H6R0 707 aaKnown RBP25.61■■□□□ 1.69
SLIT3-204ENST00000518140 KMT5AQ9NQR1 393 aa25.61■■□□□ 1.69
SLIT3-204ENST00000518140 SLC16A3O15427 465 aaKnown RBP25.6■■□□□ 1.69
SLIT3-204ENST00000518140 EPB41P11171 864 aaKnown RBP25.6■■□□□ 1.69
SLIT3-204ENST00000518140 MAPK4P31152 587 aa25.6■■□□□ 1.69
SLIT3-204ENST00000518140 ALCAMQ13740 583 aa25.6■■□□□ 1.69
SLIT3-204ENST00000518140 TAF1CQ15572 869 aaPredicted RBP25.6■■□□□ 1.69
SLIT3-204ENST00000518140 WDR59Q6PJI9 974 aa25.6■■□□□ 1.69
SLIT3-204ENST00000518140 DNAJC7Q99615 494 aa25.6■■□□□ 1.69
SLIT3-204ENST00000518140 TMEM206Q9H813 350 aa25.6■■□□□ 1.69
SLIT3-204ENST00000518140 TBX20Q9UMR3 447 aa25.6■■□□□ 1.69
SLIT3-204ENST00000518140 PLXNA1Q9UIW2 1896 aa25.6■■□□□ 1.69
SLIT3-204ENST00000518140 LGR5O75473 907 aa25.6■■□□□ 1.69
SLIT3-204ENST00000518140 SLC10A3P09131 477 aa25.6■■□□□ 1.69
SLIT3-204ENST00000518140 SMTNP53814 917 aa25.6■■□□□ 1.69
SLIT3-204ENST00000518140 FAM186BQ8IYM0 893 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms