RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 XPO4Q9C0E2 1151 aaKnown RBP6.55□□□□□ -1.36
CD47-205ENST00000517766 TMEM39BQ9GZU3 492 aa6.55□□□□□ -1.36
CD47-205ENST00000517766 RANBP17Q9H2T7 1088 aaKnown RBP6.55□□□□□ -1.36
CD47-205ENST00000517766 TTC12Q9H892 705 aaPredicted RBP6.55□□□□□ -1.36
CD47-205ENST00000517766 EHMT1Q9H9B1 1298 aa6.55□□□□□ -1.36
CD47-205ENST00000517766 NDFIP2Q9NV92 336 aa6.55□□□□□ -1.36
CD47-205ENST00000517766 KBTBD4Q9NVX7 518 aa6.55□□□□□ -1.36
CD47-205ENST00000517766 IFNKQ9P0W0 207 aa6.55□□□□□ -1.36
CD47-205ENST00000517766 LRWD1Q9UFC0 647 aa6.55□□□□□ -1.36
CD47-205ENST00000517766 DDX25Q9UHL0 483 aaKnown RBP6.55□□□□□ -1.36
CD47-205ENST00000517766 CNOT7Q9UIV1 285 aaKnown RBP6.55□□□□□ -1.36
CD47-205ENST00000517766 FEM1BQ9UK73 627 aa6.55□□□□□ -1.36
CD47-205ENST00000517766 PNMA2Q9UL42 364 aa6.55□□□□□ -1.36
CD47-205ENST00000517766 PRR12Q9ULL5 1215 aa6.55□□□□□ -1.36
CD47-205ENST00000517766 NFE2L3Q9Y4A8 694 aa6.55□□□□□ -1.36
CD47-205ENST00000517766 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.55□□□□□ -1.36
CD47-205ENST00000517766 ABCB11O95342 1321 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 SYNRGQ9UMZ2 1314 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 C1QTNF9BB2RNN3 333 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 MEIS2O14770 477 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 WDR46O15213 610 aaKnown RBP6.54□□□□□ -1.36
CD47-205ENST00000517766 CTNND1O60716 968 aaKnown RBP6.54□□□□□ -1.36
CD47-205ENST00000517766 OFD1O75665 1012 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 TRPA1O75762 1119 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 RHOBTB3O94955 611 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 TDP2O95551 362 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 ACPPP15309 386 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 VAMP1P23763 118 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 CIITAP33076 1130 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 ECE1P42892 770 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 GMPSP49915 693 aaPredicted RBP6.54□□□□□ -1.36
CD47-205ENST00000517766 JAG1P78504 1218 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 MLLT1Q03111 559 aaPredicted RBP6.54□□□□□ -1.36
CD47-205ENST00000517766 SPAG1Q07617 926 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 TBC1D8BQ0IIM8 1120 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 NOLC1Q14978 699 aaKnown RBP eCLIP6.54□□□□□ -1.366e-6■□□□□ 10.9
CD47-205ENST00000517766 TPD52L1Q16890 204 aaPredicted RBP6.54□□□□□ -1.36
CD47-205ENST00000517766 SHROOM1Q2M3G4 852 aaPredicted RBP6.54□□□□□ -1.36
CD47-205ENST00000517766 KIF4BQ2VIQ3 1234 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 Q4G0T1 1027 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 FILIP1LQ4L180 1135 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 NAALADL2Q58DX5 795 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 NXPE4Q6UWF7 544 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 SV2BQ7L1I2 683 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 MIGA2Q7L4E1 593 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 LRRC8AQ8IWT6 810 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 SAMD3Q8N6K7 520 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 ANKRD20A12PQ8NF67 263 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 KIAA1524Q8TCG1 905 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 LPAR1Q92633 364 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 TEPSINQ96N21 525 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 ZNF830Q96NB3 372 aaPredicted RBP6.54□□□□□ -1.36
CD47-205ENST00000517766 NUP88Q99567 741 aaPredicted RBP6.54□□□□□ -1.36
CD47-205ENST00000517766 C7orf25Q9BPX7 421 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 ZNF341Q9BYN7 854 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 NT5C3AQ9H0P0 336 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 HSD3B7Q9H2F3 369 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 AS3MTQ9HBK9 375 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 FANCLQ9NW38 375 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 RWDD2AQ9UIY3 292 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 PCDHA12Q9UN75 941 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 MRPL11Q9Y3B7 192 aaKnown RBP6.54□□□□□ -1.36
CD47-205ENST00000517766 RABGAP1Q9Y3P9 1069 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 PHIPQ8WWQ0 1821 aa6.54□□□□□ -1.36
CD47-205ENST00000517766 COL11A1P12107 1806 aaPredicted RBP6.53□□□□□ -1.36
CD47-205ENST00000517766 PVALEFA0A1B0GWK0 134 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 BICDL2A1A5D9 508 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 PP2D1A8MPX8 630 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 GCOM1H8Y6P7 765 aaPredicted RBP6.53□□□□□ -1.36
CD47-205ENST00000517766 SLC37A4O43826 429 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 EDIL3O43854 480 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 CYP3A4P08684 503 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 POLR2MP0CAP2 368 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 BCRP11274 1271 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 ZNF18P17022 549 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 PLCG1P19174 1290 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 FGFR3P22607 806 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 EIF4BP23588 611 aaKnown RBP6.53□□□□□ -1.36
CD47-205ENST00000517766 CDC25AP30304 524 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 SREBF1P36956 1147 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 TERF1P54274 439 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 USP14P54578 494 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 SNRPNP63162 240 aaKnown RBP6.53□□□□□ -1.36
CD47-205ENST00000517766 PAK1Q13153 545 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 USH1GQ495M9 461 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 COBLL1Q53SF7 1204 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 HYIQ5T013 277 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 FAM83BQ5T0W9 1011 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 HAUS3Q68CZ6 603 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 CNNM4Q6P4Q7 775 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 USP17L6PQ6QN14 398 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 HFE2Q6ZVN8 426 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 TMC6Q7Z403 805 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 FILIP1Q7Z7B0 1213 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 ALYREFQ86V81 257 aaKnown RBP6.53□□□□□ -1.36
CD47-205ENST00000517766 CCDC112Q8NEF3 446 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 ERMNQ8TAM6 284 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 ACER1Q8TDN7 264 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 FBF1Q8TES7 1133 aa6.53□□□□□ -1.36
CD47-205ENST00000517766 NOC3LQ8WTT2 800 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms