RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 NCOR2Q9Y618 2525 aa11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 RIF1Q5UIP0 2472 aaKnown RBP11.92□□□□□ -0.5
PDGFRB-203ENST00000517660 DOCK5Q9H7D0 1870 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 CCDC194A0A1B0GVG4 234 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 CHMP2AO43633 222 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 ZNF862O60290 1169 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 EYA4O95677 639 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 OATP04181 439 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 STAG3L1P0CL83 205 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 NEK4P51957 841 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 CRYBB1P53674 252 aaPredicted RBP11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 INF2Q27J81 1249 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 MIER3Q7Z3K6 550 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 ZNF710Q8N1W2 664 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 METTL13Q8N6R0 699 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 LINC01599Q8WXQ3 324 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 GJA10Q969M2 543 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 CDHR5Q9HBB8 845 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 CLEC1BQ9P126 229 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 DDX25Q9UHL0 483 aaKnown RBP11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 CD207Q9UJ71 328 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 GINS2Q9Y248 185 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 FAM186AA6NE01 2351 aa11.91□□□□□ -0.5
PDGFRB-203ENST00000517660 GPR182O15218 404 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 GRM6O15303 877 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 RPS6KA5O75582 802 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 SEC24BO95487 1268 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 RB1P06400 928 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 GCFC2P16383 781 aaKnown RBP11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 TMOD1P28289 359 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 PRKCEQ02156 737 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 NFX1Q12986 1120 aaKnown RBP11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 ADAM15Q13444 863 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 ME3Q16798 604 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 LETM2Q2VYF4 491 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 PPP4R3AQ6IN85 833 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 EFCAB12Q6NXP0 572 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 B3GNT9Q6UX72 402 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 NEK8Q86SG6 692 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 NPAS4Q8IUM7 802 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 TMEM105Q8N8V8 129 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 NECAB1Q8N987 351 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 ETNPPLQ8TBG4 499 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 ZNF689Q96CS4 500 aaPredicted RBP11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 FAM20AQ96MK3 541 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 NAP1L4Q99733 375 aaKnown RBP11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 TMX1Q9H3N1 280 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 ERVK-5Q9HDB9 667 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 NOC2LQ9Y3T9 749 aaKnown RBP11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 RWDD3Q9Y3V2 267 aa11.9□□□□□ -0.5
PDGFRB-203ENST00000517660 KAT6AQ92794 2004 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 NCK2O43639 380 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 DTNBO60941 627 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 GPR32O75388 356 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 DGKIO75912 1065 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 VTNP04004 478 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 FDPSP14324 419 aaKnown RBP11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 BMPR1AP36894 532 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 CAMK1Q14012 370 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 BTG3Q14201 252 aaPredicted RBP11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 UGCGQ16739 394 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 KIZQ2M2Z5 673 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 TMEM266Q2M3C6 531 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 XKR3Q5GH77 459 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 PIK3AP1Q6ZUJ8 805 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 CRIPAKQ8N1N5 446 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 SMRP1Q8NCR6 262 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 OXER1Q8TDS5 423 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 TMEM40Q8WWA1 233 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 GTF3C6Q969F1 213 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 MAP7D2Q96T17 732 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 NIFKQ9BYG3 293 aaKnown RBP11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 RC3H2Q9HBD1 1191 aaKnown RBP11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 GJB4Q9NTQ9 266 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 RNF216Q9NWF9 866 aaPredicted RBP11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 ST3GAL5Q9UNP4 418 aa11.89□□□□□ -0.51
PDGFRB-203ENST00000517660 ADGRA3Q8IWK6 1321 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 DENND3A2RUS2 1198 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 C5orf67F2Z3F1 127 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 TBX3O15119 743 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 SLC37A4O43826 429 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 MARCH6O60337 910 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 STBD1O95210 358 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 LARGE1O95461 756 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 CTNNB1P35222 781 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 SARSP49591 514 aaKnown RBP11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 CLCN3P51790 818 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 NUBP1P53384 320 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 PSMC5P62195 406 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 TBC1D8BQ0IIM8 1120 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 TARBP2Q15633 366 aaKnown RBP11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 CMTR2Q8IYT2 770 aaKnown RBP11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 LINC01465Q8N7H1 131 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 NSUN7Q8NE18 718 aaKnown RBP11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 CLP1Q92989 425 aaKnown RBP11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 PPP1R16BQ96T49 567 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 OSMRQ99650 979 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 ADAM2Q99965 735 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 ADAMTS10Q9H324 1103 aa11.88□□□□□ -0.51
PDGFRB-203ENST00000517660 IGFLR1Q9H665 355 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms