RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 RILPL1Q5EBL4 403 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 KRT40Q6A162 431 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 RGMBQ6NW40 437 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 FAM173BQ6P4H8 233 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 CATIPQ7Z7H3 387 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 C12orf40Q86WS4 652 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 DZIP1Q86YF9 867 aaKnown RBP9.33□□□□□ -0.92
SFXN1-211ENST00000515736 MIGA1Q8NAN2 632 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 FANCBQ8NB91 859 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 RNF214Q8ND24 703 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 ENGASEQ8NFI3 743 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 TDRD7Q8NHU6 1098 aaKnown RBP9.33□□□□□ -0.92
SFXN1-211ENST00000515736 TBC1D16Q8TBP0 767 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 TBC1D22AQ8WUA7 517 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 ACSF2Q96CM8 615 aaPredicted RBP9.33□□□□□ -0.92
SFXN1-211ENST00000515736 SGSM3Q96HU1 749 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 ANO10Q9NW15 660 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 GGA1Q9UJY5 639 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.33□□□□□ -0.92
SFXN1-211ENST00000515736 SUGT1Q9Y2Z0 365 aa9.33□□□□□ -0.92
SFXN1-211ENST00000515736 TNKSO95271 1327 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 SNAP23O00161 211 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 TM4SF5O14894 197 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 MMP1P03956 469 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 PTMAP06454 111 aaKnown RBP9.32□□□□□ -0.92
SFXN1-211ENST00000515736 IL1R1P14778 569 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 AFF1P51825 1210 aaKnown RBP9.32□□□□□ -0.92
SFXN1-211ENST00000515736 TERF1P54274 439 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 RING1Q06587 406 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 SNW1Q13573 536 aaKnown RBP9.32□□□□□ -0.92
SFXN1-211ENST00000515736 GNPTABQ3T906 1256 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 ADGRA1Q86SQ6 560 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 THNSL2Q86YJ6 484 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 FMR1NBQ8N0W7 255 aaPredicted RBP9.32□□□□□ -0.92
SFXN1-211ENST00000515736 CRACR2BQ8N4Y2 399 aaPredicted RBP9.32□□□□□ -0.92
SFXN1-211ENST00000515736 FSIP1Q8NA03 581 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 KLHDC7BQ96G42 594 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 CCDC34Q96HJ3 373 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 BPIFA3Q9BQP9 254 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 WNT10AQ9GZT5 417 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 DCP1AQ9NPI6 582 aaPredicted RBP9.32□□□□□ -0.92
SFXN1-211ENST00000515736 RRAGDQ9NQL2 400 aaPredicted RBP9.32□□□□□ -0.92
SFXN1-211ENST00000515736 TOMM22Q9NS69 142 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 GGA3Q9NZ52 723 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 HOOK1Q9UJC3 728 aaKnown RBP9.32□□□□□ -0.92
SFXN1-211ENST00000515736 PCDHA7Q9UN72 937 aa9.32□□□□□ -0.92
SFXN1-211ENST00000515736 G3BP2Q9UN86 482 aaKnown RBP9.32□□□□□ -0.92
SFXN1-211ENST00000515736 PRPF3O43395 683 aaKnown RBP9.31□□□□□ -0.92
SFXN1-211ENST00000515736 PRKAB2O43741 272 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 MYO1BO43795 1136 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 CUTAO60888 179 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 RFPL3O75679 317 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 RAG1P15918 1043 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 POU3F3P20264 500 aaPredicted RBP9.31□□□□□ -0.92
SFXN1-211ENST00000515736 KIF5BP33176 963 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 GNAQP50148 359 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 PABPC4Q13310 644 aaKnown RBP eCLIP9.31□□□□□ -0.92
SFXN1-211ENST00000515736 LAPTM4AQ15012 233 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 ZRSR1Q15695 479 aaKnown RBP9.31□□□□□ -0.92
SFXN1-211ENST00000515736 RRP12Q5JTH9 1297 aaKnown RBP9.31□□□□□ -0.92
SFXN1-211ENST00000515736 IFIT1BQ5T764 474 aaKnown RBP9.31□□□□□ -0.92
SFXN1-211ENST00000515736 FOXB2Q5VYV0 432 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 CTR9Q6PD62 1173 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 SARM1Q6SZW1 724 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 NOSTRINQ8IVI9 506 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 DHX37Q8IY37 1157 aaKnown RBP9.31□□□□□ -0.92
SFXN1-211ENST00000515736 CEP57L1Q8IYX8 460 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 PRPF38AQ8NAV1 312 aaKnown RBP9.31□□□□□ -0.92
SFXN1-211ENST00000515736 ANKS1AQ92625 1134 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 SLC26A6Q9BXS9 759 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 TCP11L1Q9NUJ3 509 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 PCDHGC5Q9Y5F6 944 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 CSADQ9Y600 493 aa9.31□□□□□ -0.92
SFXN1-211ENST00000515736 ASTN2O75129 1339 aaPredicted RBP9.31□□□□□ -0.92
SFXN1-211ENST00000515736 FAM155AB1AL88 458 aaPredicted RBP9.3□□□□□ -0.92
SFXN1-211ENST00000515736 GOLGA6L19H0YKK7 550 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 RANBP6O60518 1105 aaKnown RBP9.3□□□□□ -0.92
SFXN1-211ENST00000515736 ADCY5O95622 1261 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 ALBP02768 609 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 MYCLP1P12525 358 aaPredicted RBP9.3□□□□□ -0.92
SFXN1-211ENST00000515736 CNGA1P29973 690 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 POLR2BP30876 1174 aaKnown RBP9.3□□□□□ -0.92
SFXN1-211ENST00000515736 STAT3P40763 770 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 CCNFP41002 786 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 CBX2Q14781 532 aaPredicted RBP9.3□□□□□ -0.92
SFXN1-211ENST00000515736 ANO6Q4KMQ2 910 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 ANGEL2Q5VTE6 544 aaKnown RBP9.3□□□□□ -0.92
SFXN1-211ENST00000515736 NBPF11Q86T75 865 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 DGKHQ86XP1 1220 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 JAMLQ86YT9 394 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 ENAHQ8N8S7 591 aaPredicted RBP9.3□□□□□ -0.92
SFXN1-211ENST00000515736 KLHL23Q8NBE8 558 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 CTCFLQ8NI51 663 aaPredicted RBP9.3□□□□□ -0.92
SFXN1-211ENST00000515736 SDR42E1Q8WUS8 393 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 CHAC2Q8WUX2 184 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 KISS1RQ969F8 398 aaPredicted RBP9.3□□□□□ -0.92
SFXN1-211ENST00000515736 CDCA5Q96FF9 252 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 PYM1Q9BRP8 204 aaKnown RBP9.3□□□□□ -0.92
SFXN1-211ENST00000515736 IER2Q9BTL4 223 aa9.3□□□□□ -0.92
SFXN1-211ENST00000515736 WDR18Q9BV38 432 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms