RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	PORCN	Q9H237	461 aa		13.14	□□□□□ -0.31
LMNA-224	ENST00000515711	NDST4	Q9H3R1	872 aa		13.14	□□□□□ -0.31
LMNA-224	ENST00000515711	EFCC1	Q9HA90	598 aa		13.14	□□□□□ -0.31
LMNA-224	ENST00000515711	VTA1	Q9NP79	307 aa		13.14	□□□□□ -0.31
LMNA-224	ENST00000515711	SLC5A4	Q9NY91	659 aa		13.14	□□□□□ -0.31
LMNA-224	ENST00000515711	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.14	□□□□□ -0.31
LMNA-224	ENST00000515711	DIS3	Q9Y2L1	958 aa	Known RBP	13.14	□□□□□ -0.31
LMNA-224	ENST00000515711	ZMYM2	Q9UBW7	1377 aa		13.14	□□□□□ -0.31
LMNA-224	ENST00000515711	TRIOBP	Q9H2D6	2365 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711		A0A1W2PQJ5	194 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711		H0YGN5	161 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	ZNF862	O60290	1169 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	GGPS1	O95749	300 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	PGK2	P07205	417 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	FECH	P22830	423 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	NMT1	P30419	496 aa	Known RBP	13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	RFC5	P40937	340 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	SMTN	P53814	917 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	NCKAP1L	P55160	1127 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	SP2	Q02086	613 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	SP4	Q02446	784 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	RBL2	Q08999	1139 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	MKRN3	Q13064	507 aa	Known RBP	13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	TTLL4	Q14679	1199 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	UTP14C	Q5TAP6	766 aa	Known RBP	13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	PLA2G4F	Q68DD2	849 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	CHRDL2	Q6WN34	429 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	TRIM59	Q8IWR1	403 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	EXOC8	Q8IYI6	725 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	SCFD2	Q8WU76	684 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	SEPT1	Q8WYJ6	367 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	ACCS	Q96QU6	501 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	GBP3	Q9H0R5	595 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	MLXIP	Q9HAP2	919 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	CYP26B1	Q9NR63	512 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	EXOC7	Q9UPT5	735 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	BRCA2	P51587	3418 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	ZSWIM8	A7E2V4	1837 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	EMSY	Q7Z589	1322 aa		13.13	□□□□□ -0.31
LMNA-224	ENST00000515711	MGAM	O43451	1857 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	COL6A3	P12111	3177 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	GOLGA6L9	A6NEM1	432 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	SFI1	A8K8P3	1242 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	KIF2A	O00139	706 aa	Predicted RBP	13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	OFD1	O75665	1012 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	STBD1	O95210	358 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	TUBB4A	P04350	444 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	TRIM21	P19474	475 aa	Known RBP	13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	ADORA2A	P29274	412 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	HOXD13	P35453	343 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	SLC26A2	P50443	739 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	ADK	P55263	362 aa	Known RBP	13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	INHBE	P58166	350 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	IRF5	Q13568	498 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	GRB14	Q14449	540 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	TSR1	Q2NL82	804 aa	Known RBP	13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	ZNF792	Q3KQV3	632 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	CELF3	Q5SZQ8	465 aa	Known RBP	13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	FAM102B	Q5T8I3	360 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	ARMCX2	Q7L311	632 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	TMEM139	Q8IV31	216 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	SLC9A9	Q8IVB4	645 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	C12orf56	Q8IXR9	622 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	SYCP3	Q8IZU3	236 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	MSL3	Q8N5Y2	521 aa	Known RBP	13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	ZNF397	Q8NF99	534 aa	Predicted RBP	13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	SPIRE2	Q8WWL2	714 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	KCNN1	Q92952	543 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	NIFK	Q9BYG3	293 aa	Known RBP	13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	EDEM3	Q9BZQ6	932 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	R3HDML	Q9H3Y0	253 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	AZI2	Q9H6S1	392 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	NRBP2	Q9NSY0	501 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	ABHD10	Q9NUJ1	306 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	DDX41	Q9UJV9	622 aa	Known RBP	13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	CAPN11	Q9UMQ6	739 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	CUL9	Q8IWT3	2517 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	ADGRA2	Q96PE1	1338 aa		13.12	□□□□□ -0.31
LMNA-224	ENST00000515711	SLC15A5	A6NIM6	579 aa		13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	NOP56	O00567	594 aa	Known RBP	13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	TGFB1I1	O43294	461 aa		13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	ZSCAN12	O43309	604 aa		13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	GAS2	O43903	313 aa	Known RBP	13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	LGR5	O75473	907 aa		13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	XRCC5	P13010	732 aa	Known RBP	13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	CASP14	P31944	242 aa		13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	PSMC2	P35998	433 aa	Known RBP	13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	POLG	P54098	1239 aa	Predicted RBP	13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	NPEPPS	P55786	919 aa		13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	GTF2B	Q00403	316 aa		13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	PPP2R5A	Q15172	486 aa		13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	SYCP1	Q15431	976 aa		13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	MAMDC4	Q6UXC1	1216 aa		13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	GPR142	Q7Z601	462 aa		13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	PLEKHH3	Q7Z736	793 aa		13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	TMTC1	Q8IUR5	882 aa		13.11	□□□□□ -0.31
LMNA-224	ENST00000515711	FBXO16	Q8IX29	292 aa	Predicted RBP	13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms