RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 FIGNQ5HY92 759 aa22.11■■□□□ 1.13
TRIO-223ENST00000515710 HAUS6Q7Z4H7 955 aa22.11■■□□□ 1.13
TRIO-223ENST00000515710 SYCP3Q8IZU3 236 aa22.11■■□□□ 1.13
TRIO-223ENST00000515710 HVCN1Q96D96 273 aa22.11■■□□□ 1.13
TRIO-223ENST00000515710 NTPCRQ9BSD7 190 aaKnown RBP22.11■■□□□ 1.13
TRIO-223ENST00000515710 AZI2Q9H6S1 392 aa22.11■■□□□ 1.13
TRIO-223ENST00000515710 PPME1Q9Y570 386 aa22.11■■□□□ 1.13
TRIO-223ENST00000515710 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.11■■□□□ 1.13
TRIO-223ENST00000515710 TLL2Q9Y6L7 1015 aa22.11■■□□□ 1.13
TRIO-223ENST00000515710 WDR81Q562E7 1941 aa22.11■■□□□ 1.13
TRIO-223ENST00000515710 RBM47A0AV96 593 aaKnown RBP22.1■■□□□ 1.13
TRIO-223ENST00000515710 LGR5O75473 907 aa22.1■■□□□ 1.13
TRIO-223ENST00000515710 SNRPFP62306 86 aaKnown RBP22.1■■□□□ 1.13
TRIO-223ENST00000515710 MTERF2Q49AM1 385 aa22.1■■□□□ 1.13
TRIO-223ENST00000515710 FAM167AQ96KS9 214 aa22.1■■□□□ 1.13
TRIO-223ENST00000515710 SLC5A4Q9NY91 659 aa22.1■■□□□ 1.13
TRIO-223ENST00000515710 CAPN11Q9UMQ6 739 aa22.1■■□□□ 1.13
TRIO-223ENST00000515710 NOP56O00567 594 aaKnown RBP22.1■■□□□ 1.13
TRIO-223ENST00000515710 CLIC2O15247 247 aa22.1■■□□□ 1.13
TRIO-223ENST00000515710 EPB41P11171 864 aaKnown RBP22.1■■□□□ 1.13
TRIO-223ENST00000515710 DMP1Q13316 513 aaPredicted RBP22.1■■□□□ 1.13
TRIO-223ENST00000515710 TAF1CQ15572 869 aaPredicted RBP22.1■■□□□ 1.13
TRIO-223ENST00000515710 PLPPR4Q7Z2D5 763 aa22.1■■□□□ 1.13
TRIO-223ENST00000515710 SLC9A9Q8IVB4 645 aa22.1■■□□□ 1.13
TRIO-223ENST00000515710 KSR1Q8IVT5 923 aa22.1■■□□□ 1.13
TRIO-223ENST00000515710 TMEM174Q8WUU8 243 aa22.1■■□□□ 1.13
TRIO-223ENST00000515710 PCMTD1Q96MG8 357 aaPredicted RBP22.1■■□□□ 1.13
TRIO-223ENST00000515710 MKNK1Q9BUB5 465 aa22.1■■□□□ 1.13
TRIO-223ENST00000515710 AGPAT3Q9NRZ7 376 aa22.1■■□□□ 1.13
TRIO-223ENST00000515710 DMAC2Q9NW81 257 aa22.1■■□□□ 1.13
TRIO-223ENST00000515710 ARMCX3Q9UH62 379 aaPredicted RBP22.1■■□□□ 1.13
TRIO-223ENST00000515710 CPA4Q9UI42 421 aa22.1■■□□□ 1.13
TRIO-223ENST00000515710 MYH11P35749 1972 aa22.09■■□□□ 1.13
TRIO-223ENST00000515710 ABCD1P33897 745 aa22.09■■□□□ 1.13
TRIO-223ENST00000515710 TAPT1Q6NXT6 567 aa22.09■■□□□ 1.13
TRIO-223ENST00000515710 CCDC102AQ96A19 550 aa22.09■■□□□ 1.13
TRIO-223ENST00000515710 SPATA33Q96N06 139 aa22.09■■□□□ 1.13
TRIO-223ENST00000515710 XPNPEP1Q9NQW7 623 aa22.09■■□□□ 1.13
TRIO-223ENST00000515710 PDGFCQ9NRA1 345 aa22.09■■□□□ 1.13
TRIO-223ENST00000515710 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.09■■□□□ 1.13
TRIO-223ENST00000515710 FECHP22830 423 aa22.08■■□□□ 1.13
TRIO-223ENST00000515710 KRT9P35527 623 aa22.08■■□□□ 1.13
TRIO-223ENST00000515710 PSMC2P35998 433 aaKnown RBP22.08■■□□□ 1.13
TRIO-223ENST00000515710 RFC5P40937 340 aa22.08■■□□□ 1.13
TRIO-223ENST00000515710 NPTX2P47972 431 aa22.08■■□□□ 1.13
TRIO-223ENST00000515710 POLGP54098 1239 aaPredicted RBP22.08■■□□□ 1.13
TRIO-223ENST00000515710 HSDL1Q3SXM5 330 aa22.08■■□□□ 1.13
TRIO-223ENST00000515710 IFNL1Q8IU54 200 aa22.08■■□□□ 1.13
TRIO-223ENST00000515710 DHX33Q9H6R0 707 aaKnown RBP22.08■■□□□ 1.13
TRIO-223ENST00000515710 KMT5AQ9NQR1 393 aa22.08■■□□□ 1.13
TRIO-223ENST00000515710 ABHD10Q9NUJ1 306 aa22.08■■□□□ 1.13
TRIO-223ENST00000515710 EXOC7Q9UPT5 735 aa22.08■■□□□ 1.13
TRIO-223ENST00000515710 SIK3Q9Y2K2 1263 aa22.08■■□□□ 1.13
TRIO-223ENST00000515710 LUC7L2Q9Y383 392 aaKnown RBP22.08■■□□□ 1.13
TRIO-223ENST00000515710 TTC26A0AVF1 554 aa22.08■■□□□ 1.12
TRIO-223ENST00000515710 CCDC169A6NNP5 214 aa22.08■■□□□ 1.12
TRIO-223ENST00000515710 SLC16A4O15374 487 aa22.08■■□□□ 1.12
TRIO-223ENST00000515710 AKAP3O75969 853 aa22.08■■□□□ 1.12
TRIO-223ENST00000515710 LAMC2Q13753 1193 aa22.08■■□□□ 1.12
TRIO-223ENST00000515710 TARBP2Q15633 366 aaKnown RBP22.08■■□□□ 1.12
TRIO-223ENST00000515710 C12orf56Q8IXR9 622 aa22.08■■□□□ 1.12
TRIO-223ENST00000515710 MSL3Q8N5Y2 521 aaKnown RBP22.08■■□□□ 1.12
TRIO-223ENST00000515710 MAML3Q96JK9 1138 aa22.08■■□□□ 1.12
TRIO-223ENST00000515710 IFT74Q96LB3 600 aa22.08■■□□□ 1.12
TRIO-223ENST00000515710 EMSYQ7Z589 1322 aa22.07■■□□□ 1.12
TRIO-223ENST00000515710 A0A1W2PQJ5 194 aa22.07■■□□□ 1.12
TRIO-223ENST00000515710 H0YCG3 227 aa22.07■■□□□ 1.12
TRIO-223ENST00000515710 CCP110O43303 1012 aa22.07■■□□□ 1.12
TRIO-223ENST00000515710 TRIM21P19474 475 aaKnown RBP22.07■■□□□ 1.12
TRIO-223ENST00000515710 SLC26A2P50443 739 aa22.07■■□□□ 1.12
TRIO-223ENST00000515710 TERF1P54274 439 aa22.07■■□□□ 1.12
TRIO-223ENST00000515710 EMC2Q15006 297 aa22.07■■□□□ 1.12
TRIO-223ENST00000515710 CCAR2Q8N163 923 aaKnown RBP22.07■■□□□ 1.12
TRIO-223ENST00000515710 BBXQ8WY36 941 aaPredicted RBP22.07■■□□□ 1.12
TRIO-223ENST00000515710 CEP89Q96ST8 783 aa22.07■■□□□ 1.12
TRIO-223ENST00000515710 TTYH3Q9C0H2 523 aa22.07■■□□□ 1.12
TRIO-223ENST00000515710 GPBP1L1Q9HC44 474 aaPredicted RBP22.07■■□□□ 1.12
TRIO-223ENST00000515710 ARID2Q68CP9 1835 aa22.07■■□□□ 1.12
TRIO-223ENST00000515710 PLXNA1Q9UIW2 1896 aa22.06■■□□□ 1.12
TRIO-223ENST00000515710 RASSF10A6NK89 507 aa22.06■■□□□ 1.12
TRIO-223ENST00000515710 OFD1O75665 1012 aa22.06■■□□□ 1.12
TRIO-223ENST00000515710 SCP2P22307 547 aa22.06■■□□□ 1.12
TRIO-223ENST00000515710 SREBF2Q12772 1141 aa22.06■■□□□ 1.12
TRIO-223ENST00000515710 E4F1Q66K89 784 aaPredicted RBP22.06■■□□□ 1.12
TRIO-223ENST00000515710 TMEM161BQ8NDZ6 487 aa22.06■■□□□ 1.12
TRIO-223ENST00000515710 OR8K1Q8NGG5 319 aa22.06■■□□□ 1.12
TRIO-223ENST00000515710 SLC7A3Q8WY07 619 aa22.06■■□□□ 1.12
TRIO-223ENST00000515710 GLG1Q92896 1179 aa22.06■■□□□ 1.12
TRIO-223ENST00000515710 KATNBL1Q9H079 304 aa22.06■■□□□ 1.12
TRIO-223ENST00000515710 FRMD4BQ9Y2L6 1034 aa22.06■■□□□ 1.12
TRIO-223ENST00000515710 RNF225M0QZC1 329 aaPredicted RBP22.06■■□□□ 1.12
TRIO-223ENST00000515710 SNAI1O95863 264 aaPredicted RBP22.06■■□□□ 1.12
TRIO-223ENST00000515710 GH1P01241 217 aa22.06■■□□□ 1.12
TRIO-223ENST00000515710 KCNH2Q12809 1159 aa22.06■■□□□ 1.12
TRIO-223ENST00000515710 TSR1Q2NL82 804 aaKnown RBP22.06■■□□□ 1.12
TRIO-223ENST00000515710 C17orf99Q6UX52 265 aa22.06■■□□□ 1.12
TRIO-223ENST00000515710 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.06■■□□□ 1.12
TRIO-223ENST00000515710 EXOC8Q8IYI6 725 aa22.06■■□□□ 1.12
TRIO-223ENST00000515710 SMC1BQ8NDV3 1235 aa22.06■■□□□ 1.12
TRIO-223ENST00000515710 ZNF397Q8NF99 534 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms